| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1029 |
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| Symbol | |
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| ID | 3366523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1159307 |
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| End bp | 1161271 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651372 |
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| Product | peptidase aspartic, active site |
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| Protein accession | YP_234123 |
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| Protein GI | 66044282 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC CCTTCATCCT GTCGCTGCTG GTGACCGGCC TGAGTCTTTC TTCGCCGTTC
AGCCAGGCAG AAACCCTGCC TTTGCCGTTG ACCGGCCCGG CGTATGCCAT CGCCAACGAA
GCCTACATGG CCTACAACCG CAAGGATTAC GACCTGGCCA TTGCCAAAGC GAACGAAGCG
TTGCGTCAGC GCGGTGACGC TCAGCAGTTG CGTGACCTCA TTACGTTGGC CGAACGCGAC
AAGTACCGCC GCGATCACCC GCAACGCGCT TACAAGACGC GTCCGCAACC TGGCTATCTG
GAAGGCAATC GGGCGCTGCG CGCCTACGCC AACCGCGACT ACGACGGCTC GGCCAGTCAT
GCGCGCAAGG CCATTGCCCA GGCACCGAAG AACCTCGATT ACCGCATGAT GCTGATCGAG
GCACTGCAAC GTCAGCAGCG TCTTGATCAA GCACAGGCAG CGATCAACGA TGCCGAGCAG
GCACTGGGGC CGCAACAGGT GCTGACGCGT CGTCGGCAGG CGATTCAGGA GCAGGTGGCG
GTCGACAAGG CGGCCACCGG CTACAAGGCA CTGGCTCGCG GAGATAACGA CACCGCAGTC
AGCGAGGCGC GGGAGGCTGT CCGCAGTTTC CCAAAGCAGA TGGCCTACCG GAAATTACTG
GTCAGCGCCC TGATTGCCCA AGGGCAGTAT GCCGAAGCGC GCTCTGCGGC CACCGAAGCG
CTGGCGCTGA ATGGCAACGA CGCCACCCTG CTCGTCCAGC GCGGACAAAT GCGTCAACGC
CTGGGCGATC AGGACGGTGC GCGTCAGGAC TTCGCCCAGG CCATGGCGGT CGGCAACCTG
CCGCTGCGTG AACAGGCCTC GTTGTACGCC GCCATGGGCC AGCCGAGTGA GGCATTGCAA
CGCTTGCAGA AAGCACGCGA CGCGGGCGAA CTGCAACCCG GCGATGAAGT GCAGATAGCC
TATTTCCTCA GCCAGGCGGG CGATGATCAA GGTGCGCTGG ATACGTTCAA GCGTGTTGAC
CGTCAGTCCG GCCTCAAGCC ACGCGAAGTG CAGGATGCCG CCTACAGCGC GATGCGCACG
TCGAACGATG CGCAGGCCAT CGCCTACTTC AAGCGCGTGC TCGATTACCA GCAGACCGGC
GATCTGCAGA TGCCCGCGCA ACAGGTGTTC GATACGCGAC GTGCCGTTTC TGATCTGTCC
CGTGAATGGG GCCTGACCAA CACCACGACT TATCGGGGCG CCAGCACCAG CAGCGGCCTG
AGCGGCGCAC CCGGCGGCAG CAATGACAGC GTGCAGAACA GCACCGAAGT GTTCTGGCGA
CCCTTCGGTT ACCGCAATGC GCGCTTCGTC GAGCTTTACG GACGCGTCAC CGACACGCTG
TGGAGCAAGG AAGGCGACTC CGACACAGGC GCGGACGCTT TGCAGGGCGC GCTCGGTATC
CGGGTCAAGC CGTTCAGCGC AGTCAACGTG ATCGGTGCCT TCGAACGCAC CTTTCCGCTA
GGCAACTCGA ACGCCGACGG CGACTGGCTG GTGCGCCTGG GCTACGGCTC GAGCATCGGC
ACCGACCTGC GCGTCGATGT ACCGAGCTGG TGGACGTCGC AGCTGTACGC TGAAGGCGGG
CGCTATCTGC AGGACAAGCG CAACTATTTC AACAGCGAGT GGCAGGTCGG ACGCAGCTTC
CGTCTGGACA GCATCAGCCC GCGGCTGGTG GTGTTTCCCC ATGTGGTCGC CGCAGTGGAC
TACGATTCGA AGATGCGCAG TGAGGTCGAC AGTCTCGGCC GTAGCAGCAC ATCATCGGGT
AATGCTGGCG GGCTTGGTGT CGGTACGGGC GTGCGTTACT GGTTCCGCGA GGATAAGTAC
AAGGCGCCGC AGTCGTATGT CGACTTCTCC GTGCAGTATC GCGAGAAAGT GTTTGGCGAT
GACCGCGCAG AAGGCGTTTT CGCACGCATG ACGTTCTCGT GGTGA
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| Protein sequence | MKRPFILSLL VTGLSLSSPF SQAETLPLPL TGPAYAIANE AYMAYNRKDY DLAIAKANEA
LRQRGDAQQL RDLITLAERD KYRRDHPQRA YKTRPQPGYL EGNRALRAYA NRDYDGSASH
ARKAIAQAPK NLDYRMMLIE ALQRQQRLDQ AQAAINDAEQ ALGPQQVLTR RRQAIQEQVA
VDKAATGYKA LARGDNDTAV SEAREAVRSF PKQMAYRKLL VSALIAQGQY AEARSAATEA
LALNGNDATL LVQRGQMRQR LGDQDGARQD FAQAMAVGNL PLREQASLYA AMGQPSEALQ
RLQKARDAGE LQPGDEVQIA YFLSQAGDDQ GALDTFKRVD RQSGLKPREV QDAAYSAMRT
SNDAQAIAYF KRVLDYQQTG DLQMPAQQVF DTRRAVSDLS REWGLTNTTT YRGASTSSGL
SGAPGGSNDS VQNSTEVFWR PFGYRNARFV ELYGRVTDTL WSKEGDSDTG ADALQGALGI
RVKPFSAVNV IGAFERTFPL GNSNADGDWL VRLGYGSSIG TDLRVDVPSW WTSQLYAEGG
RYLQDKRNYF NSEWQVGRSF RLDSISPRLV VFPHVVAAVD YDSKMRSEVD SLGRSSTSSG
NAGGLGVGTG VRYWFREDKY KAPQSYVDFS VQYREKVFGD DRAEGVFARM TFSW
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