Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0980 |
Symbol | |
ID | 3366474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1112214 |
End bp | 1113380 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651323 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_234074 |
Protein GI | 66044233 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.101796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGGCG AATTTGATGC CATCCGACCT TACAACGATG CAGAAGTCCC CGCCGTATTG GCACGTCTGC TGAGCGACAA AGCCTTTCTC GCCATTCTGA CCCGGTTCCG CTTTCCCCGC CTGGCGGGCG CATTCGGCTG GCTGCTGCAG CCAACCCTGG CACGCAAGCT GCGCCGCGAA TTTGCCGGTA TCGACTCGGT CGCCACGCTG CAGGACAAGG TTGAATATTA TGTCGACCAC ACCATCGAAC GCGCCACCGA CGGGGTCACC TACACTGGCG TCGAACAGCT GAAGTCCGGT TGCGCCTACC TGTTTCTGGC CAACCATCGC GATATCGTCA TGGACCCGGC GTTCGTCAAC TATGCCGTGT ACCACGCAGG CCTGCCCACT CCGCGCATCG CAATCGGCGA CAACCTGCTG CAAAAGCCAT TCGTCAGCGA CCTGATGCGC CTGAACAAGA GCTTCATCGT GCATCGCTCG ATCACCGGGC GACGCGAGAA GATGGCGGCT TATCAATTGC TGTCGGCGTA CATCAATCAC TCGATTACCC AGGACTGCCA GTCGATCTGG ATCGCTCAGG CCGAGGGCCG CGCCAAGGAC GGTGACGACC GTACCGAGTC AGCGATCCTC AAGATGTTCC ACATGAGCCG CAAGGATGAG CCGTTTGGCG ACGTGATTCG TTCGCTGAAC CTGATCCCGG TGTCGATCAG CTATGAGTAT GATCCGTGCG ACAGCGCCAA GGCCCGCGAG CTGTACATTC GTGCGACAAC CGGCGCCTAC ACCAAGACGC CGGGCGAAGA CGACGTGAGC ATTGCCCTGG GGATCACCGG CTATAAAGGC CGTGTGCATG TGAACTTTGC ACCGCCGATC ACCGAGCACT TCGAGGACAC CAAGCAACTG GCCATCGAGA TGGACCGGCA GATTCTCGGC GGCTATCGGC TGTTCCCGGT GCATTACCTG GCGTACGCAC AGTGGAGCGA TGCCGATCCG GCGCTTGAAG TGCCGAAGGC TGAAGCCCTG TTCCCGGCCG ATGAACTCGA ACGTGCCAGG GAGGAGTGGG AAAGTCGTCT GGCAGGCACG CCGATCGAGC ACCGCCCTTA CATGATTCAG CAATACGCGA CACCGGTGCG CAACCAGTAC CGCGTCAAGG CAGGGCTGGC GCTTTAA
|
Protein sequence | MMGEFDAIRP YNDAEVPAVL ARLLSDKAFL AILTRFRFPR LAGAFGWLLQ PTLARKLRRE FAGIDSVATL QDKVEYYVDH TIERATDGVT YTGVEQLKSG CAYLFLANHR DIVMDPAFVN YAVYHAGLPT PRIAIGDNLL QKPFVSDLMR LNKSFIVHRS ITGRREKMAA YQLLSAYINH SITQDCQSIW IAQAEGRAKD GDDRTESAIL KMFHMSRKDE PFGDVIRSLN LIPVSISYEY DPCDSAKARE LYIRATTGAY TKTPGEDDVS IALGITGYKG RVHVNFAPPI TEHFEDTKQL AIEMDRQILG GYRLFPVHYL AYAQWSDADP ALEVPKAEAL FPADELERAR EEWESRLAGT PIEHRPYMIQ QYATPVRNQY RVKAGLAL
|
| |