| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0897 |
|---|
| Symbol | |
|---|
| ID | 3366389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1016129 |
|---|
| End bp | 1017100 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637651240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233993 |
|---|
| Protein GI | 66044152 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0962881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCC CTGCCCTGTT TCCGCGACAC ATTGCCGTGC TGATCCTGGC GCTGCTGGCC
TGTTCGTTTG CCGGCAACCA CATCGCGGCG CGCATTGCCT TCGATCATGA CACCGGCCTG
CTGCTGGCCA TCCTTTGTCG CTCCGGCGTC ACCTTGCTGG TGCTGGTCAG CCTGGTGCTC
TGGCAGCGTG AAAGGCTCAG TCTGCCCGCC AGCACCTGGC GCTGGCAGCT GCTTCTGGGG
TTGCTGATCG CCACTCAGAG CTTTTGCATC TACTCGGCGG TGGCACGTAT TCCGGTGGCC
CTGGCCTTGC TGGTGGTCAA TGTCTCGCCG ATCCTGCTGG CGTTGCTGAC CTGGGCACTG
GGGGGAGCCA GGCCGACACG GCGCGCAGCA GGCCTGATGG GCTTGATCCT GTTTGGCCTG
ACGCTGGCGC TGGACGTGCC GCAGCGCCTG TCGAACCCCG GCAGCAGCGA GCCGCAATGG
CTGGAGGGCG TCGTCTACGC GTCGACCGCT GCGGTGGTGT TCGCCTTTGC GCTGTGGATT
ACCGATAACA AACTGGCGGG CATGCGCGGC AGCGTACGCA GCATGCTGAC CATGGCCGTG
GTGTTCGTCG TCGCGGCCAT CGCCGGCAGC AGCGGCGTGC TGCCCGGCGG CGTGGGTCTG
CCGACGAGTT CTGTCGGCTG GAGCGCACTG GCCAGTCTGG TGGTTTTGTA CGGGCTGGGT
TTCTCGCTGC TGTTCATCTG CATGGCACGG CTGGACATCG CCCGCAACGC GCCAGTGATG
AATATCGAGC CGGTGGCCAG CCTGCTGTTT GGCTGGCTGA TTCTCGATCA ATTGCTCAGC
AGCGGTCAGG TGGTCGGCGG GCTGATCGTG GTCAGCGGCA TCGTGCTGCT GACCTGGCGT
CGCGCCCGGT CGCCTGACCC TCAATCATCC AGAAAGGCTT TGAAGCATGT CCACGAACGT
ACTGACCCTT GA
|
|---|
| Protein sequence | MSAPALFPRH IAVLILALLA CSFAGNHIAA RIAFDHDTGL LLAILCRSGV TLLVLVSLVL
WQRERLSLPA STWRWQLLLG LLIATQSFCI YSAVARIPVA LALLVVNVSP ILLALLTWAL
GGARPTRRAA GLMGLILFGL TLALDVPQRL SNPGSSEPQW LEGVVYASTA AVVFAFALWI
TDNKLAGMRG SVRSMLTMAV VFVVAAIAGS SGVLPGGVGL PTSSVGWSAL ASLVVLYGLG
FSLLFICMAR LDIARNAPVM NIEPVASLLF GWLILDQLLS SGQVVGGLIV VSGIVLLTWR
RARSPDPQSS RKALKHVHER TDP
|
|---|
| |