Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0876 |
Symbol | |
ID | 3366368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 997800 |
End bp | 1000082 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651219 |
Product | TonB-dependent receptor:TonB-dependent receptor, C-terminal |
Protein accession | YP_233972 |
Protein GI | 66044131 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.341234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.740329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTT CCAGAATTCA CCTTGCGTTG GTCGCCGCGG GCATGAGTCA CGGCATGGTT ATGGCCGACT CGAGTGGCAG TGACGTCGGC ACCATTGGTG TGCAAGGCAG GGCGACGGTT GGGGGTGGCT ACATGGTGCA GGAGGAGAGC ATCAAGGCGC GCTCCACTGT CACCAAAGAA GCGCTCGACA AGCAGACCGC AACAGGTAAC GCGATCGACA AGCTCAAGTA CACACCGGGC CTGAACATCT CCAGCGAAGA CGCCACGGGT CTGTCCGGCT TTCGCTTTAC CATGCGCGGT CTCAACTCCG ATCAGGTCGG CATGTCGGTA GACGGCATGC CGATCAACGA CTCCGGCAAC TACGCGCTGT ACTCCAACCT GCTGGGGGAC CCGGAAAACA TCGATCAGAT TTTCGTGACT CAAGGCTCTG CCGAAAGTGA CGGCCCGCAC ATCGGTTCCA GCGGCGGCAA CATCGGTATC GTCACCATCC GGCCCACCAA GGAAACCGGC GCATTCGTCA AGCAGGTGGC GGGCAGCAAC GGCACTTACA AGACCTTCGC GCGACTCAAC ACCGGAGAAA TCAACGGGCT GAGCAACTGG CTGTCGATGT CTCACACCGA AGGTCAGAAA TGGCGCGGCG ATGGCGCGGT GCGTGCCGAC AAGGTGGAGT GGAACAGCTT CTTCGACATG GGCTCGGGCA ATACCGCCAA CCTGATCCTC AAGTACCACG AGCAGGACAA CAACAGTTAC AGCCAGCTCA CCAAGAGTCA GTTCCAGCAG AACGGGCGCA AGTTTGACCC TTATCCTTCG ACGCCTGCAC TGGGCAGCAA CGGCAAATTG TCCAGCTACT ACGAGCTGGC GCAGAACCCG TTCCAGACGT TCACCGGCGT GCTCAATACC CAATTCAAGC TGGCCGACAA TCTGTCTCTT TCAGTCATCC CGTATTATTT CTGGGGTAAC GGCAGCGGCG TGAACAGTTC TTCCTATGCG CTCAATCGCG GCTCGAATCA GAACGGTGTG TTCGACCTGA GCAACCTGCC GACGGCGGCG GCTTATAACG CAGACGGGTC ATCGACCACT GGCGTGTATT ACCGGCCGTC GCGCACGCAG ACCTGGCGTC CGGGCATCAC CACCAAGTTG AACTGGGACG TCAACGACGA GCACAGCGTA CAGGTCGGCT ACTGGTATGA ACGCGCGCGC CAGTCGCAGA CTCAGCCGTT CATCCGCCTG AAGAGCAATG GCAAGCCTGA AAGCATCCAG CCGGATTCGG ACTACATGGT CGATGCCAAC GGCAACGAGA TCCAGGGCCG TGACCGCTAT ACCGTGACGC CTGCACAAAA AGTCTGGGCT CAGGACACCT GGTATTTCGC CCCGGACTGG ACGCTGGTCG GCGGCCTGGC CTTCATGAAC GTCGAACGTG AAGGCACCAA CCACGGCAGC CTGACCGAGC GGCCGGAAAA GCGCGACCAG ACCTACAACA AGCTGTTGCC GAACCTCGGC CTCAAATACC AGCTGGATGA GCGCGACCAG TTGTTCTACA GCCTGTCACG CAACATGCGC GTGCCGCAGA ACTACGTTCT GTATGACCCG GGCACCGGCT CCATCGACAG CAAGCCGGAA ACCAGCTGGA ACCACGAACT GGGCTGGCGC TACACCGAAC AGGACATGAC GCTGGCGGCC ACACTGTTTT ACCTGCAGTT CAAGGACCGT CAGGTGTCAT CAAAAGACGT CAATGGCGAT TTTGCCGACA TCAACGCCGG TGCAGTCGAC AACAGCGGTC TGGAACTGGA ATGGAGTGGC CTGCTGCCGC ACCATTTCAA TTACTACACC TCGTACACCT ACACCCGCGC CAAACAGAAA GATGACCTGA CCGTGTTCAA TAACGGTACC GCCATCGAAC TGCCGACCAG TGGCAAGCAA TTTACCAACG TGCCGAAGAA CATGCTGGCC GCCAACATCG GCTACGACGA CGGAAGTTAT TACGGGACCT TTGGCGCCAA GCTCACCAGC AAGCTGTATG GCGACCTGAC CAACGACGAA AGCATTCCGG GGCGCACCAT CTTCAATCTG GGCGCAGGTA TCTACCTCCC GGTGGACAAG AAAATCGTCA AGGACGCCAC CTTGCGTCTG AACGTCGACA ACCTGTTCGA CAAGGAATAC CTGGACGGCG TGTACACCAC CAAAACCAAC GCGGGCACTT ACAGCGGTTT CCGCGATGGC GACCCGGCCT ACATCGTCGG GGTCGAGCGT ACCGTCACCG TTTCTCTTGA AGCCAATTTC TAA
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Protein sequence | MKFSRIHLAL VAAGMSHGMV MADSSGSDVG TIGVQGRATV GGGYMVQEES IKARSTVTKE ALDKQTATGN AIDKLKYTPG LNISSEDATG LSGFRFTMRG LNSDQVGMSV DGMPINDSGN YALYSNLLGD PENIDQIFVT QGSAESDGPH IGSSGGNIGI VTIRPTKETG AFVKQVAGSN GTYKTFARLN TGEINGLSNW LSMSHTEGQK WRGDGAVRAD KVEWNSFFDM GSGNTANLIL KYHEQDNNSY SQLTKSQFQQ NGRKFDPYPS TPALGSNGKL SSYYELAQNP FQTFTGVLNT QFKLADNLSL SVIPYYFWGN GSGVNSSSYA LNRGSNQNGV FDLSNLPTAA AYNADGSSTT GVYYRPSRTQ TWRPGITTKL NWDVNDEHSV QVGYWYERAR QSQTQPFIRL KSNGKPESIQ PDSDYMVDAN GNEIQGRDRY TVTPAQKVWA QDTWYFAPDW TLVGGLAFMN VEREGTNHGS LTERPEKRDQ TYNKLLPNLG LKYQLDERDQ LFYSLSRNMR VPQNYVLYDP GTGSIDSKPE TSWNHELGWR YTEQDMTLAA TLFYLQFKDR QVSSKDVNGD FADINAGAVD NSGLELEWSG LLPHHFNYYT SYTYTRAKQK DDLTVFNNGT AIELPTSGKQ FTNVPKNMLA ANIGYDDGSY YGTFGAKLTS KLYGDLTNDE SIPGRTIFNL GAGIYLPVDK KIVKDATLRL NVDNLFDKEY LDGVYTTKTN AGTYSGFRDG DPAYIVGVER TVTVSLEANF
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