Gene Psyr_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0806 
Symbol 
ID3366293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp911918 
End bp912868 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content59% 
IMG OID637651144 
Producthypothetical protein 
Protein accessionYP_233902 
Protein GI66044061 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAT TCTCGCCTTA TGCGCTGGGG GCAACGCTGT ACATGCCCGC GACCCGGGAC 
GATATCGTCG ATGTGGTGTT CGGTGAAAAG ATTCCCGAGC TGCGTTCGCT GGTCGTCTGT
CTGGAAGACG CCGTGGCACT GACCGATGTC GACACGGCAC TGATCAATCT TCGTCAGGTA
CTCACCCGTA TCCGCGATCA TGGCGGTCGT CCGGCCAACG GTCCGCTGCT GTTCGTGCGT
CCGAGAGACG CGGCGATGGC GCGCATTCTC AACGACTGGC CGCTGATGGC GCACGTCGAC
GGTTTCGTTG TTCCCAAGCT CTCGCTGAAA AGTCTGACGA GCTGGGAGCA GGCCGTCACC
AACCCGGCGC TGGCATTGAT GCCTACACTG GAAACTCCGG AGGTGTTCAA TCCGGCAGCA
ATGGTCGAGC TGGGGGAAGC CTTGAAGGCC AGCCTGTACG AGCGGATCAT TGCGCTGCGC
ATCGGAGGCA ATGACCTGAT GGGCTGTCTG GGGCTGCGCC GCAATCCGGC CATGACCCTG
TATTCGACGC CAATGGGGTA TGTCATCCCC ATGCTGGCGG GCGTCATGGG TGCGCAGGGC
TTTGCGCTCA CCGCACCGGT CTTCGAGCAA CTGGCCACTC CGGACATTCT GCAGCATGAG
CTGGCGCTGG ATATTACCAA TGGGTTGGTC GGTAAAACGG CAATTCACCC CTCGCAGGTC
AATATCATTC AGAATGCGCT ACGCGTCAGT CTGGAGGACA TGAACTCCGC CCGGATGATT
TTGAACTCTG TGGCGCCCGC AGTGTTCAAG TACAACGATG CGATGTGTGA ACCGGCTACC
CACTATAAAT GGGCAACCCA CATCATGGAG CGCGCCAAAT GGCATGGAGT GTTATCCGCA
CCCGCTTCGA TCATGGATGC CAGCATTCGA CTCGCTGAGG CAGTTAGCTA G
 
Protein sequence
MALFSPYALG ATLYMPATRD DIVDVVFGEK IPELRSLVVC LEDAVALTDV DTALINLRQV 
LTRIRDHGGR PANGPLLFVR PRDAAMARIL NDWPLMAHVD GFVVPKLSLK SLTSWEQAVT
NPALALMPTL ETPEVFNPAA MVELGEALKA SLYERIIALR IGGNDLMGCL GLRRNPAMTL
YSTPMGYVIP MLAGVMGAQG FALTAPVFEQ LATPDILQHE LALDITNGLV GKTAIHPSQV
NIIQNALRVS LEDMNSARMI LNSVAPAVFK YNDAMCEPAT HYKWATHIME RAKWHGVLSA
PASIMDASIR LAEAVS