Gene Psyr_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0769 
Symbol 
ID3366256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp874418 
End bp874861 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content54% 
IMG OID637651108 
Producthypothetical protein 
Protein accessionYP_233865 
Protein GI66044024 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.477312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCG TGCTCAGAGC AGCAGCGATT TATTTTGTCT TGATGGTCTT GTTTCGTGTT 
GCCGGACGCC GCTCCCTTAC CGACCTCACT ACCTTCGATT TCGTCTTGTT GCTGATCATT
GGCGAGGCCA CTCAGCAAGC GCTGCTGGGC GATGATTTTT CGGTGACCAA CGCGATACTG
ATCATCTCCA CCCTTATCGC CATAGACGTC GGCTTTTCCC TGGCCAAACG CCGATCGAAG
CGGCTGGCCA AATTTCTGGA TGGCGGCCCC ACGGTTATCG TCGAAGACGG CAAGCCACTG
ACCAAACGAA TGAGAGAGGC GCGCATCAGT GAATCCGATG TGATGGAGGC CGCACGAACC
ACGCAAGGGA TCGTGGAGAT GAAGGACATC AGGTACGCGA TCATTGAAAG GAACGGAGAG
ATATCGGTCA TACCGTTCAA ATGA
 
Protein sequence
MDAVLRAAAI YFVLMVLFRV AGRRSLTDLT TFDFVLLLII GEATQQALLG DDFSVTNAIL 
IISTLIAIDV GFSLAKRRSK RLAKFLDGGP TVIVEDGKPL TKRMREARIS ESDVMEAART
TQGIVEMKDI RYAIIERNGE ISVIPFK