Gene Psyr_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0762 
Symbol 
ID3366249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp867577 
End bp868851 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID637651101 
Productextracellular solute-binding protein 
Protein accessionYP_233858 
Protein GI66044017 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 



Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000277245 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.855778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC TGAAATCTCT TCTTCCCGCC GCGCTGCTCA CCCTGTCTGC AGGGTTTCCT 
GCGCTGTCGA ACGCAGCCGA TCTGACGATC TCGTGCGGGG CCGTCGGCGC TGAATTGCAA
CTGTGCAAGG AGGCAGTCGA TAGCTGGTCA AAACAGACCG GCAACAACGT TCAGGTGGTT
TCCACGCCTA ACTCTGCGAC CGAGCGTCTG TCGTTCTACC AGCAGATCCT CAGTGCCCAG
TCCACCGACA TCGACATCAT TCAAATCGAC ATGGTGTGGC CGGGGATGCT CGCCAAACAC
CTGACGGATC TGCGCGAACT GCTTCCGGCG AATGCGACAC AAGGCTATTT CCAGGCCCAG
GTGGACAACG CCACCGTCGA CGGCCGGCTG GTGTCGATGC CCTGGTTTAC CGACTCGGGG
CTGCTGTACT ACCGCAAGGA TCTGCTCGAC AAGTACCAAC AGCCGGTCCC CCAGACCTGG
GAGGACATGA CCGCTACCGC CCAAAAAGTG CAAAAAGCCG AGCGCGATGC CGGGAACGCC
ACTATGTGGG GCTATGTGTT CCAGGGGCGC GCTTATGAAG GCCTGACATG CAACGCTCTG
GAATGGATCA GCAGCCAGCC GGACGGCGGA CTGGTCAACC CGCGCGGAGA CATCGTGGTC
AACAGCCAGG CCTCACGAGT CGCGCTGACC CTGGCCAAAA GCTGGGTCGG CGACATCTCC
CCGCCCGGCG TCCTCAATTA CACCGAGGAA GAAGGCCGTG GCGTGTTCCA GTCGGGAAAT
GCACTGTTCA TGCGCAACTG GCCTTACGTG TGGGCCTTGG TGCAAAGCAA GGACAGCGCG
ATAAAAGACA AGGTTGGCGT AGCGCCCCTG CCCAGCGGCG GCGCGAACGG CACCCATGCT
TCAACGCTCG GAGGCTGGGG GCTGGCGGTT TCGCGCTACA GCCGCAACCC CAAGCTGGCG
GCAGAACTGG TTGCCTACCT GACCAGCGCC CAACAGCAAA AACAGCGTGC CCTGGCAGGT
GCCTACAACC CGGTCATCGA GTCGCTGTAT GCCGACCCCG AGTTGCTCGC GGCAATGCCT
TACTACCCCC AGTTGCACAG CATCCTCAGC AATGGGGTCA TGCGCCCCGC CGCCATCACG
GCCAACGGCT ACCCACGCGT CTCCAACGCC TTCTTCGATC GGGTGCATAG CGTGCTGGCG
GGCGATATAC CGGTCGATCA GGCACTGGTC GAACTGGAAC GCGAACTGAC CCGCATCAAA
CGCCGGAACT GGTAA
 
Protein sequence
MKQLKSLLPA ALLTLSAGFP ALSNAADLTI SCGAVGAELQ LCKEAVDSWS KQTGNNVQVV 
STPNSATERL SFYQQILSAQ STDIDIIQID MVWPGMLAKH LTDLRELLPA NATQGYFQAQ
VDNATVDGRL VSMPWFTDSG LLYYRKDLLD KYQQPVPQTW EDMTATAQKV QKAERDAGNA
TMWGYVFQGR AYEGLTCNAL EWISSQPDGG LVNPRGDIVV NSQASRVALT LAKSWVGDIS
PPGVLNYTEE EGRGVFQSGN ALFMRNWPYV WALVQSKDSA IKDKVGVAPL PSGGANGTHA
STLGGWGLAV SRYSRNPKLA AELVAYLTSA QQQKQRALAG AYNPVIESLY ADPELLAAMP
YYPQLHSILS NGVMRPAAIT ANGYPRVSNA FFDRVHSVLA GDIPVDQALV ELERELTRIK
RRNW