Gene Psyr_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0718 
Symbol 
ID3366201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp820668 
End bp821162 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content57% 
IMG OID637651063 
Producttype IV pilus assembly protein PilX 
Protein accessionYP_233824 
Protein GI66043983 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4726] Tfp pilus assembly protein PilX 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA TCGTGCGATT CAATTCGATA CCGACCTTCC CTGCGCGACA GCGCGGCATG 
GTGTTGCTGG TCAGTCTGGT GTTTCTGCTG CTGCTGACGC TGCTGGGCAT TTCTTCCATG
CAAAACGCCA CGCTGCAGGA AAAGATGGCG GGCAGTGTCG TGGTTCGTAA TGTTTCGTTC
CAGGCAGCCG AGGCACAGTT GCGTCTGGGC GAGTCCTCGA TCATGGCGTC CAGGTTTTCA
ATGGCTCCCT GTACGGCTGC CTGCGCCCCG CCGTCGGATT CAACGACCGT AGTCAGGCCG
GGGTTGGGCA CTTCCGGAGT GACCTGGATC GGGACTGCCA ATGCGTTGTT CGGCATCCAG
AATCTGGGTA CAACGCCTAC GCCCATAAAA CGTCCTGCAA ATTGCACGGG CTCGGTAACG
ATGTATCGGG TAACAGCCAT CGCCATTCAA GGCACCTCAC GAACAGTGCT GGAGAGTATT
TATGCCAACT GCTAA
 
Protein sequence
MNKIVRFNSI PTFPARQRGM VLLVSLVFLL LLTLLGISSM QNATLQEKMA GSVVVRNVSF 
QAAEAQLRLG ESSIMASRFS MAPCTAACAP PSDSTTVVRP GLGTSGVTWI GTANALFGIQ
NLGTTPTPIK RPANCTGSVT MYRVTAIAIQ GTSRTVLESI YANC