Gene Psyr_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0678 
Symbol 
ID3366156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp768572 
End bp769918 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content60% 
IMG OID637651020 
Productbeta alanine--pyruvate transaminase 
Protein accessionYP_233786 
Protein GI66043945 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGT TCGAAGTGTC CGATGTGCCT GTCACCCGTC AGTTGAAGCT CGATGCTCAC 
TGGATGCCCT ACACCGCGAA CCGAAATTTC CAGCGCGACC CGCGCATGGT CGTGGCCGCG
CATGGCAGCT ATCTGACAGA CGACAAGGGA CGCAAGATCT ACGATGCACT CTCAGGTCTA
TGGACATGCG GTGCCGGGCA CACGCGCAAG GAAATTCAGG AAGCCGTGTC CCGGCAATTG
GGCGTGCTGG ATTACTCACC GGGCTTTCAG TTCGGGCACC CCCTGTCGTT CCAGCTGGCA
GAACAGATTA CCGACCTGAC GCCGGGCAAT CTCAACCACG TCTTCTATAC CAACTCGGGT
TCCGAGTGCG CGGATACGGC GGTGAAGATG GTACGCGCCT ACTGGCGGCT GAAAGGCCAG
GCGACCAAGA CCAAGATGAT CGGTCGGGCA CGCGGCTACC ACGGCGTGAA TGTGGCGGGC
ACCAGCCTGG GCGGAGTGAA TGGCAACCGC AAGATGTTCG GCCAGTTGAT GGACGTCGAC
CACTTGCCGC ACACCCTGCT GGCCAGCAAT GCGTACTCGA AGGGCATGCC CGAGGCGGGC
GGTATCGCAC TGGCTGACGA GATGCTCAAG CTGATCGAGT TGCATGATGC GTCGAACATC
GCTGCAGTGA TCGTCGAACC CATGTCGGGC TCGGCCGGTG TGATCGTTCC GCCGCAAGGC
TATCTCAAGC GCCTGCGTGA GATTTGTGAT CAACACAATA TCCTGCTGAT CTTCGATGAA
GTCATCACCG GCTTCGGCCG TACGGGCTCG ATGTTTGGCG CGGACAGTTT CGGTGTCACG
CCTGACCTGA TGTGCATCGC CAAGCAGATC ACCAATGGCG CTATCCCCAT GGGCGCGGTA
ATCGCCAGCA GCGAGATCTA TCACACGTTC ATGAACCAGC CAACGCCGGA GTACGCCGTC
GAGTTCCCTC ATGGCTATAC CTATTCCGCT CACCCCGTAG CGTGTGCGGC CGGGCTGGCG
GCGCTTGAAC TGCTGCAACG GGAGAATCTG GTGCAGCAGG CCGCCGCAGT CGCGCCGCAT
TTTGAACGTG CGCTGCACGG TATCAAGGGC GCGAAAAACG TGGTCGATAT CCGCAATTAC
GGTCTGGCGG GTGCCATCCA GCTCGCACCG CGTGACGGCG ATGCCATCGT GCGGCCCTTC
GAGGCCGGCA TGAAGCTGTG GAAAGCCGGT TTCTATGTGC GCTTTGGCGG TGACACCCTG
CAATTCGGGC CGACCTTCAA CAGCCAGGCG CAGGACCTGG ATCGCTTGTT CGATGCCGTC
GGCGAAACCC TGAACCTGAT CGACTGA
 
Protein sequence
MNMFEVSDVP VTRQLKLDAH WMPYTANRNF QRDPRMVVAA HGSYLTDDKG RKIYDALSGL 
WTCGAGHTRK EIQEAVSRQL GVLDYSPGFQ FGHPLSFQLA EQITDLTPGN LNHVFYTNSG
SECADTAVKM VRAYWRLKGQ ATKTKMIGRA RGYHGVNVAG TSLGGVNGNR KMFGQLMDVD
HLPHTLLASN AYSKGMPEAG GIALADEMLK LIELHDASNI AAVIVEPMSG SAGVIVPPQG
YLKRLREICD QHNILLIFDE VITGFGRTGS MFGADSFGVT PDLMCIAKQI TNGAIPMGAV
IASSEIYHTF MNQPTPEYAV EFPHGYTYSA HPVACAAGLA ALELLQRENL VQQAAAVAPH
FERALHGIKG AKNVVDIRNY GLAGAIQLAP RDGDAIVRPF EAGMKLWKAG FYVRFGGDTL
QFGPTFNSQA QDLDRLFDAV GETLNLID