| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0563 |
|---|
| Symbol | |
|---|
| ID | 3366039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 639956 |
|---|
| End bp | 640987 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637650903 |
|---|
| Product | ribosome-associated GTPase |
|---|
| Protein accession | YP_233671 |
|---|
| Protein GI | 66043830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC GCCAACTCAA TCGTCGTCAG AACTGGCGCA TCGAAAAAAT TCAGGGTGAG
CGTGCTGCCC GCGCAGCAAA ACGCGAGTCC GCTACGCTTG AAACACTCGA GGGTGGCGAC
CTCGGCCCCG AGCAGACGGG CCTGGTGATC GCCCACTTCG GCGTGCAAGT CGAAGTGGAA
GCTCAGGAAG GCGAAGTGAC CGGCCAGGTC TTTCGCTGCC ACCTGCGCGC CAACCTGCCT
GCACTGGTGA CCGGTGATCG CGTGGTATGG CGCGCCGGCA ATCAGGGCAT TGGCGTCATT
GTCGCGCAAC TGCCTCGCAC CACCGAACTG CGCCGCCCGG ATTCACGCGG CCAGCTCAAG
CCTGTGGCGG CCAACGTCGA CCTGATCGTG ATCGTCTTCG CGCCGATGCC CGAGCCGCAT
GCCAACCTGA TCGACCGCTA CCTGGTGGCC GCCGAGCATG CCGGGATTCG TCCGTTGCTG
CTGCTCAACA AGGCCGACCT GATCGACGAG CAGAATGCGC CCGCGCTCAA TGCGCTGCTG
GCGGTCTATC GCACACTGGG TTACCCGGTA CTGGAAGTGT CCGCGCACCA CGGTGACGGC
ATGCAGAGCC TGCAAAGCCA GCTTGACGGG CACATCAGCG TGTTCGTCGG CCAGTCCGGC
GTCGGCAAGT CCTCGCTGGT CAACAGCCTG TTGCCGGAAA CGGACACTCG GGTCGGTCCG
CTGTCCGAGG TTTCCGGTCA GGGCACACAC ACCACGACCA CCGCCCGCCT GTTTCACTTC
CCGCGCGGCG GCGATCTGAT CGACTCGCCG GGCATTCGTG AATTCGGCCT TGGCCACGTC
AGCCGTGCCG ATGTAGAGGC AGGCTTCATC GAGTTCAACG ACCTGATCGG CACGTGCCGC
TTTCGTGACT GCAAGCACGA CCGCGAACCG GGCTGCGCCC TGCTCAAGGG GCTTGAGGAC
GGCCGCGTTC AGCAGCAGCG CATGAACAGC TACCGCTCGA TCATTGCCAG CCTGCCGCAA
GACAGTTACT GA
|
|---|
| Protein sequence | MAKRQLNRRQ NWRIEKIQGE RAARAAKRES ATLETLEGGD LGPEQTGLVI AHFGVQVEVE
AQEGEVTGQV FRCHLRANLP ALVTGDRVVW RAGNQGIGVI VAQLPRTTEL RRPDSRGQLK
PVAANVDLIV IVFAPMPEPH ANLIDRYLVA AEHAGIRPLL LLNKADLIDE QNAPALNALL
AVYRTLGYPV LEVSAHHGDG MQSLQSQLDG HISVFVGQSG VGKSSLVNSL LPETDTRVGP
LSEVSGQGTH TTTTARLFHF PRGGDLIDSP GIREFGLGHV SRADVEAGFI EFNDLIGTCR
FRDCKHDREP GCALLKGLED GRVQQQRMNS YRSIIASLPQ DSY
|
|---|
| |