| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0556 |
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| Symbol | |
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| ID | 3366032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 629377 |
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| End bp | 630918 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637650896 |
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| Product | histidine kinase, HAMP region |
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| Protein accession | YP_233664 |
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| Protein GI | 66043823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.61252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGGC CCACGCCCGT TAAAACCGAT AATTTCTTCC TGCTCATCTT TCGTGCCCTG
CGTCATCGCC GTGTACCGAT CGCTTTGCGC ATTGCCAGCC ATAACGTGAT CCTGGTCGCT
TTGGCGCTGG TGATCTACGC CGGAGTCATG GGCCTGCAGT TCAAGCAGGC CATGCATGAA
CAGGCTGATG CGCTGGGGCA GGCCCTGACC ACCCAGACCG CCACCTCGGC TACCGAGCTG
TTGGTGTCCA ACGACATCCT CAGTCTCAAC GTGCTGCTGG GCAATCTGGT CAAGAATCCG
CTGGTCGCGC ATGCGGCTAT CTACAGTGTG GATAACCGCA TCCTCGCGGA GGCCGGCCAG
CGCCCGAAAA ACGGGCTTCT GGGGGAAGCT CAGGGCCTGT ATGAAATCAA GATCACGTTC
CAGGACGTGA TGGCGGGCCA TCTGCGTATC AGCCTCGACA TGTCGCAGTT CCAGCAGCCG
CTGACCATCA GCCTGCAGAG CATGGGCATT CTGGCCGGTA TCCTGCTGGC CCTGGCGCTG
GCCCTGAGTC TGCGCCTTGG CCGCCACATC TCCACGCCAC TGATGCAGAT GCGTATCTGG
CTACGCGATA TCGACCCGTA CACACCCGCC ACTGATCGCC AGGATGAAAT CGGTGATCTG
GCGCGGCAGC TGCGCACCTC GTTCGCGCCG CCGGTGCCGG AGCCAGAACC GCTGCCCGAG
CCCGAGTATG ACGGCGAGGA AGACGACAGC GAAGATCCGT ATCTGGAGCC GGAAGAGAAG
CCTGCGCCAG TGGTTTCAGC TCGTAGCAGC GAAGCAAAAC CGCGCTTGCC GGCACCACCG
GTGCAGCGCC GCATCGTTGC CGAGGAAGAT GAAGACGACG ATGAGGATCC GTTCGCCGAT
CTGCGCGACC ACTCGGACAA CTCACCAGCC GTTCGCCCGG CGGCTGCCTC GGTAGCGCCG
GTCGAGCCGC ACAACAGTGC AGTGCTGGCC GTGCAGCTGG GTGCACAGGA TCAATTGCGT
CGCCTGCCGC GTGCACGCCT TACCGAATTG CTGCAACGCT ACCGCGACTG CCTCGATCAG
GCCGCCTCGC TGTATGAAAG CGAGCTGCAT ACGCTGAATG ACGGCAGCAC GCTGATGCTG
TTCCACAGTC ACGAAAGCGG TGATGACTAC CTGACCAACG CGATCTGCTG CGGCGAGCTG
TTGCGCGCAC TCAGTCATGC CTTGCAGATC GAGGTGGCCG ATAGTGGCAT CACCTTGCAA
CTGCAACTGG GCCTGACGCT GGGTGAAGGC TTGAGCGGTC TGAGCCAGAT CGATCTGTTG
CTGACCGAAA CGGCGCAGGA CGCACTGGCG CTGTCTCAGC ACAGCCGCAA CCTGCTGCTG
GTCGAACGCC GCATCAACGA CGATCCGTTG ATCCGCCAGC GCGCCCGCAT CCGCCCGATC
GCCAGCCCGG AAGGTGCCTG CTGCGTAGAA CGCCTGATGG AGCCCTACCC GTCGATGCTC
GAGCGCCAGC TGGCGCGCAT GCACGAATCC AACAAGGCCT GA
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| Protein sequence | MNRPTPVKTD NFFLLIFRAL RHRRVPIALR IASHNVILVA LALVIYAGVM GLQFKQAMHE
QADALGQALT TQTATSATEL LVSNDILSLN VLLGNLVKNP LVAHAAIYSV DNRILAEAGQ
RPKNGLLGEA QGLYEIKITF QDVMAGHLRI SLDMSQFQQP LTISLQSMGI LAGILLALAL
ALSLRLGRHI STPLMQMRIW LRDIDPYTPA TDRQDEIGDL ARQLRTSFAP PVPEPEPLPE
PEYDGEEDDS EDPYLEPEEK PAPVVSARSS EAKPRLPAPP VQRRIVAEED EDDDEDPFAD
LRDHSDNSPA VRPAAASVAP VEPHNSAVLA VQLGAQDQLR RLPRARLTEL LQRYRDCLDQ
AASLYESELH TLNDGSTLML FHSHESGDDY LTNAICCGEL LRALSHALQI EVADSGITLQ
LQLGLTLGEG LSGLSQIDLL LTETAQDALA LSQHSRNLLL VERRINDDPL IRQRARIRPI
ASPEGACCVE RLMEPYPSML ERQLARMHES NKA
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