Gene Psyr_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0546 
Symbol 
ID3366022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp618752 
End bp619498 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content59% 
IMG OID637650886 
Productputative lipoprotein 
Protein accessionYP_233654 
Protein GI66043813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAT TGAGGATCAC TTCACTGGCT TGCCTGGCCC TGTTGCTCGG CGCCTGCCAA 
AGCCTCTTCA CGCCCAACAT GCGCACACCG CTGCAAGTCC AGCGCGATGC TTCCGAGCTG
ATCAAGCCGG GCTGCACCAC GGCCGACTGC CCGTTGGTGA ACATCGATAC CGTGCACTTC
CCCGATGAGC CGCGACTGGA CGCCATCGTT CAGAAGACGT TGCTGCAATT GACCGTTGCC
GACAGCAGCG CATCGCCACC TGCGTCGATC AAAGCCTATC AGGAACAGTT CCTGAGTCAG
GCCCAGGGTC GCAACGCCAG CTATCTGCAG GCCAAGGTAC GCGAGCAGCA TGACGGTATC
GTAGTGGTCG AACTGTCCAG CTATCTGGAG ACCGGCGGTG CCCACGGCAA CCCGGGTCGG
GCGTTCATCA ACTATTCGCG TCAGCAGCAG AAAGTCCTGA CCCTGGCTGA CATGATCATC
CCGGGCAAGG AAAGCGAGTT CTGGCAAAAA GCCCAACTGG CCCACCAGGG CTGGCTGGTA
TCGACCAAGA TGAATGAAGA CAGCGAGTTC ATGAAGACCT GGCCGTTCAA GCGCACGCCC
CACATTGCGC TGACCTACGG TGCAGTGATC CTCAAGTACT CGGTCGATAC CATCGCGCCG
TATTCGATGG GTCACATCGA GCTGAAAATT CCTTATCCTC AGCTCAATGG CATCCTCAAG
CCGGAACTGT TCCCCGGCCG CGGTTGA
 
Protein sequence
MSLLRITSLA CLALLLGACQ SLFTPNMRTP LQVQRDASEL IKPGCTTADC PLVNIDTVHF 
PDEPRLDAIV QKTLLQLTVA DSSASPPASI KAYQEQFLSQ AQGRNASYLQ AKVREQHDGI
VVVELSSYLE TGGAHGNPGR AFINYSRQQQ KVLTLADMII PGKESEFWQK AQLAHQGWLV
STKMNEDSEF MKTWPFKRTP HIALTYGAVI LKYSVDTIAP YSMGHIELKI PYPQLNGILK
PELFPGRG