Gene Psyr_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0295 
Symbol 
ID3365771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp315811 
End bp316545 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637650638 
ProductABC transporter 
Protein accessionYP_233406 
Protein GI66043565 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGC TTAGAATTTC CGCCCTGCAT AAATACTATG GCGATCATCA CGTGCTCAAA 
GGCATCGATC TATCGGTCGA AGAAGGCCAG GTCGTGGCGA TCATCGGTCG CAGCGGCTCG
GGCAAAAGCA CCCTGTTGCG CACGCTCAAC GGTCTGGAGT CGATCAACGA TGGCGTGATC
GAGGTCGATG GCGAATACCT GGACGCCGCA CGCGCCGACC TGCGCACGCT GCGCCAGAAG
GTCGGCATGG TGTTCCAGCA GTTCAACCTG TTCCCGCACC TGAGCGTGGG CGAGAACGTC
ATGCTGGCGC CGCAGGTCGT GCAGAAAGTG CCTAAGGCCG AGGCCGCCAA ACTGGCGAGG
AAGATGCTCG AACGCGTCGG CCTGGGCGAG AAGTTCGACG CCTTCCCGGA TCGCCTGTCC
GGTGGTCAGC AGCAACGCGT GGCGATTGCC CGCGCGCTGG CGATGTCGCC CAAGGTACTG
CTGTGCGACG AAATCACCTC GGCGCTGGAT CCGGAGCTGG TCAACGAAGT GCTCAGCGTG
GTCCGCCAAC TGGCAGCCGA TGGCATGACC CTGATCATGG TCACCCACGA AATGCGTTTC
GCGCGTGAAG TGGGCGACAA GCTGGTGTTC ATGCACCAGG GCAAGGTGCA CGAAGTGGGC
GACCCGAAAG AACTCTTTGC CAACCCGAAA ACCCCGGAAC TGGCGAACTT CATCGGCACA
GTGGAGCACG CCTGA
 
Protein sequence
MPLLRISALH KYYGDHHVLK GIDLSVEEGQ VVAIIGRSGS GKSTLLRTLN GLESINDGVI 
EVDGEYLDAA RADLRTLRQK VGMVFQQFNL FPHLSVGENV MLAPQVVQKV PKAEAAKLAR
KMLERVGLGE KFDAFPDRLS GGQQQRVAIA RALAMSPKVL LCDEITSALD PELVNEVLSV
VRQLAADGMT LIMVTHEMRF AREVGDKLVF MHQGKVHEVG DPKELFANPK TPELANFIGT
VEHA