| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0266 |
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| Symbol | |
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| ID | 3365742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 282921 |
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| End bp | 284993 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637650609 |
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| Product | GGDEF |
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| Protein accession | YP_233377 |
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| Protein GI | 66043536 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG ACGCGGAGCG TTGGAAAGAG AAATACCTCA AAGGGATCGA GCAACAGGAC
ACGCTCGAAA AGCGCTGGGA TGCGCGGCTC GATTTGTTGC GACGCGGTCT GGTGCGCAGC
AGTCTGGCGG CAGAAGGCTC TGACCGCGCC GTCGATGAAT GCATGAAGGA AATGCGCGAA
ATCGTCCGCA AGGACGATAT GGACGCGGGC CTGGCAGCCC TGATCCCGCG CCTCGAAAAA
GCCGTACTGG ACTCTGAACA ACGCCGTGAA GTCAGGGCCG CGCAAATCAG CTCGGCGCTG
ACCGCACTGG TTGCACAGCT GCAGTCACTG CCGCTGCCAC GCGACGTACG CAAGCCGCTC
AAGCGCTTTG CCAAGGAGCT TGAAGAGCGC GCCTCCCAGG CCCGTGAGCT GCCCCTGCTG
CTTGGCGAGT TGAGCAATTT GCAGGGCCAG GCCCTGACCC AGATTGAAAA ACCTGAAGAA
GGTCCCCGTC AGGGGCTGCT GCAACGCCTG TTCGGTTCGC GCGAGGGTCA CGGCCACGAG
CCTCATCCTG AGGCGGCTCA TCCCGAAGAC GCCGCCTCCT CGGCGCCGGA ATCGCATGAA
CCCGACGTCG CGCCGCAAGC AGCGAATACT TACGCCCCGC CAGACGCGTC TCCTGTCGAA
GCCGAGGCCG TTGATTCCAC TGCCGCAGCC GCCGTTGCCG CAGACAGCAC GCCGCCAACG
CCGGCCCCGG AAACCGATGC GCCTGCCGCA GTGATACCCG CCGTTGCGAC GCCTGAAGAA
CCTGCGCCAT CGACCACCGC TGCGGACATT GCTCCAGCGC CAACAGAGGC CGTCGCCGAA
CCTGCACCGA TCACTGTCGA ACCCATCGAT TTCGCGGATC TCCTGGCGCC TGTCCCATCA
GTGCCCTACC AGCAGCGACC CGCGCCAATC GACGTGCCAG TTGAAGAACC CGACGCAGAG
GCCGAGCAGC AGCCCGAGTC GGCAGAAGGC GAAGAAGGTT ACGCGCTACC CTCCTCACCA
GAGCCCAGCT ATAGCTCGGT GGCGGCACAC ATTGAACAGA CCCTGCTGGG CCTGCTGGAC
GACCTGACCC TGTCAGAGCA CTTTCGCCCC CAGGTCGAGG ACATGCAGTT ACGCTTGAAA
CATGGGCTTA ACTGGTACGA ATTGCTGCCG ATCCTCGACG ATCTGGCAGT GTTGATGCTG
GCGATCAACA ACGGCGGCCA ACAGGAGTTC GGCACTTACC TCAAGCAGCT CAATGAACGG
CTCGAATCGT TTCAGAGCCA CCTGCAGGCC GCCAGTGAAG ATCACGCCGA GGACCAGTCC
ACCGCGCGCG ACCTGAACGA ACAGTTGCGC GAACAGGTGG GCGGCCTGCA AAGCAGTGTT
CAGGACGCCT CCGATCTGCC CAGCCTCAAG CGGGTGCTCG ACAATCGGCT TGAGGCCCTG
CTCGGCACCA TGGATCACTA CCAGCTCAAG CGCGATGCCC GCGAGCGCGA AGTGGCCTCG
CGCCTGCAAG GTCTGGCGGC CCGCGTCGCG AGCATGGAGC AGGAGGCCCT GGGTTTCAGG
ACTCACCTGG AGGAACAGCG TCAAAAGGCC CTGATCGACC CGCTTACCGG ACTGCCCAAT
CGTGCCGCCT GGGGCGAGCG CCTTGAACGG GAGATGGCCC GCTGGCACGA AGAAAAAAAC
AGCCTGCTGG TGTGCATTCT GGACCTGGAC CATTTCAAAC GCATCAACGA TGGCTACGGG
CACCTGGCTG GCGACAAGGT ATTGAAGATC GTCGCCAATG TCCTCAGCAA ACGCCTGCGC
GCCGATGACT TCATGGCACG GTTTGGCGGC GAAGAATTTG TCATGCTGCT GCCTGCGACA
CCTCCTGCCA CCGGGCTGAA ACTGCTCGAT GAACTGCGCG CCGCCGTCGA GTCATGCCCT
TTCCACTTCA AGGGCGAACG AGTCACCATC ACTGTATCCA TCGGCATGAC GGCCTTTCGT
CCGTCAGAGC GGAGCGACAC CGCCATCAAA CGTGCCGACC AGGCGCTTTA CAAGGCCAAG
GAGAACGGTC GCAACCGCAT CGAACAGGGC TGA
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| Protein sequence | MSDDAERWKE KYLKGIEQQD TLEKRWDARL DLLRRGLVRS SLAAEGSDRA VDECMKEMRE
IVRKDDMDAG LAALIPRLEK AVLDSEQRRE VRAAQISSAL TALVAQLQSL PLPRDVRKPL
KRFAKELEER ASQARELPLL LGELSNLQGQ ALTQIEKPEE GPRQGLLQRL FGSREGHGHE
PHPEAAHPED AASSAPESHE PDVAPQAANT YAPPDASPVE AEAVDSTAAA AVAADSTPPT
PAPETDAPAA VIPAVATPEE PAPSTTAADI APAPTEAVAE PAPITVEPID FADLLAPVPS
VPYQQRPAPI DVPVEEPDAE AEQQPESAEG EEGYALPSSP EPSYSSVAAH IEQTLLGLLD
DLTLSEHFRP QVEDMQLRLK HGLNWYELLP ILDDLAVLML AINNGGQQEF GTYLKQLNER
LESFQSHLQA ASEDHAEDQS TARDLNEQLR EQVGGLQSSV QDASDLPSLK RVLDNRLEAL
LGTMDHYQLK RDAREREVAS RLQGLAARVA SMEQEALGFR THLEEQRQKA LIDPLTGLPN
RAAWGERLER EMARWHEEKN SLLVCILDLD HFKRINDGYG HLAGDKVLKI VANVLSKRLR
ADDFMARFGG EEFVMLLPAT PPATGLKLLD ELRAAVESCP FHFKGERVTI TVSIGMTAFR
PSERSDTAIK RADQALYKAK ENGRNRIEQG
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