Gene Psyr_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0053 
Symbol 
ID3365528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp54432 
End bp54908 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID637650396 
Producthypothetical protein 
Protein accessionYP_233165 
Protein GI66043324 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAG CGCTCTGGAG TTTCACCCTC GATTTCTACG CCCGACCGGG TGTGGAACAG 
GCTTGCCTGA CGCTGCAAGC CAACGGGGCC AACGTGTGCA TGGTGCTTTG CGGGGTGTGG
CTGGGCACGC GCGACGTGGC GTGCGATGCT CAGCGAGTGG CGCAAATAAA GCAGTTGGCG
ACACCCTGGC ATGACGATGT GGTGCGTCCG TTGCGGGATT TGCGTAACCA ATGGCGCCAT
GCGGCGCTTG AAGACGCACA GCTCAGTGCG TTGCGAATGA AGGTCAAGGC GCTGGAACTG
GAGGCCGAAC AGGGTCTGAT GATGAAGCTT GAGGCACTGA CCGGGGACTG GCCGGCGGGT
GAGGCGAGGA ATGCAGAGGA GTGGCTGCTC GAACTTGCCG AAGTGGACGC AGAAAAAAAC
CGCGATGCGC TGCATGTGCT GCGCATCGCG GTTGGACTTG CCGTCGACCA GACTTAG
 
Protein sequence
MPSALWSFTL DFYARPGVEQ ACLTLQANGA NVCMVLCGVW LGTRDVACDA QRVAQIKQLA 
TPWHDDVVRP LRDLRNQWRH AALEDAQLSA LRMKVKALEL EAEQGLMMKL EALTGDWPAG
EARNAEEWLL ELAEVDAEKN RDALHVLRIA VGLAVDQT