| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0053 |
|---|
| Symbol | |
|---|
| ID | 3365528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 54432 |
|---|
| End bp | 54908 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650396 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233165 |
|---|
| Protein GI | 66043324 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5589] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02444] conserved hypothetical protein TIGR02444 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCAG CGCTCTGGAG TTTCACCCTC GATTTCTACG CCCGACCGGG TGTGGAACAG
GCTTGCCTGA CGCTGCAAGC CAACGGGGCC AACGTGTGCA TGGTGCTTTG CGGGGTGTGG
CTGGGCACGC GCGACGTGGC GTGCGATGCT CAGCGAGTGG CGCAAATAAA GCAGTTGGCG
ACACCCTGGC ATGACGATGT GGTGCGTCCG TTGCGGGATT TGCGTAACCA ATGGCGCCAT
GCGGCGCTTG AAGACGCACA GCTCAGTGCG TTGCGAATGA AGGTCAAGGC GCTGGAACTG
GAGGCCGAAC AGGGTCTGAT GATGAAGCTT GAGGCACTGA CCGGGGACTG GCCGGCGGGT
GAGGCGAGGA ATGCAGAGGA GTGGCTGCTC GAACTTGCCG AAGTGGACGC AGAAAAAAAC
CGCGATGCGC TGCATGTGCT GCGCATCGCG GTTGGACTTG CCGTCGACCA GACTTAG
|
|---|
| Protein sequence | MPSALWSFTL DFYARPGVEQ ACLTLQANGA NVCMVLCGVW LGTRDVACDA QRVAQIKQLA
TPWHDDVVRP LRDLRNQWRH AALEDAQLSA LRMKVKALEL EAEQGLMMKL EALTGDWPAG
EARNAEEWLL ELAEVDAEKN RDALHVLRIA VGLAVDQT
|
|---|
| |