Gene CNI03850 details

Gene Information

• Locus tag: CNI03850
• ID: 3259788
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: -
• Start bp: 1035296
• End bp: 1038816
• Gene Length: 3521 bp
• Protein Length: 869 aa
• GC content: 50%
• IMG OID: 638258880
• Product: expressed protein
• Protein accession: XP_572957
• Protein GI: 58271602
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2271] Sugar phosphate permease

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GATCCATATA GGCTTCCCAG AATACTTCTC AACGTCTCAA CACCTCATCT TCGTAACCAT 
AATCCGCGCA CACCGCCAAA TATGACGGCC ACTCCTCCGG GCAGAATAGC CCTTCCGCCC 
AAACCAACAA TTACTGACAT CCTCGGCGGG TCTTCGGCTC TCGCGTCCGA CACACCATCT 
CCTCAAGCAC ATCAAAGCTT CAACTCTCCA CACTCTTCCG CCGTCAATGG GCATTCAAGA 
GGGACTATTC CGCGCTCCAA AGCTCGTACA AAGTCGGCTC GACTTAGTTT TTCTAGTTAT 
GGTAGAGGCA GAGCAGCCAG TTCTCGAGGT CCAGCGGGCG GAATCGTCGA CGATCTGCTA 
GATGATGAGG ATTTCGGACC AAAGTTGCCC ACTTTGGTGC CCGGGATCCG AGCGGCTTAT 
GCCACTCCTC TCCCTGCACT TCCTATGATT GTAATGTGTA TAGTGAGTGG CAACGGATTC 
ATAGATCTGC AATGACATGT AGCTAATCTG CTGCTGCGCA GGCAATGCTG TCAGAGCTAT 
TAGCGGCGAA CTTGTGCACT CCATTCATCC TCAAGCAGGT CGAAGGTGTG TCTACAGGTG 
TTTATATGTC TAGTAATGGC TTGCTGACTT AATCCCGCAT GGAAGGTTTC TTCCTTAACT 
CCGGTCGAGA AAAGAATAGT GAGACGGAAG CCGCAGTTGG TCTTTGGACA GGCAATCTTG 
TCTCTGTCTT CTTCATCACA CAATTTTTCA CCTCTCTCCT TTGGAGTAGC ATAGCAGATC 
GTCATGGTCG TCGTGCTGTG TTAGTAGCCA GTCTTGCCGG AAGCGCTATT GGTGAGTCAG 
TAATTGGGAT TCCGCTTGTG TTCTGTGACT TACGCCATGT AGCTCTTGTA ATTTTTGGTA 
CTTCTGAATC TGTGAGACTT GGGTCAATGT GTAAATCCAG CATGTAAGCT GACGCTATAA 
GTTAGCTTCC CGAGGCTATC TGTGTCAGAC TGATTCAAGG CATTTTCGGA GGTGCTGTCG 
GAGTAGTGAG TTTCCAGCTA ACTATTAGGA ATAGCTCTAA CAGCAGGTTG TCCAGTTCCG 
AGGTTCGATC CGAGACTTGA CTGACGACAC TAACGCCGCT CGTGCTTATG CTATGCTCGG 
TTTCTCATGG GGTTTCGGTG GTGTCATTGG TCCTATCATT GGCGGTGTCT TTGAAAGCCC 
AAAGGAGAAC TTCCCCGGTA CTGCTTTGGC TCAAATTCGT AAGATGACTG GTATCCTTAG 
TATGTCAAGA TGATGATCGC TAATTTTCAA TGTCTGCCAG CCCTATTCCA AAATTTCCCA 
TATATCCTTC CGACTATCAT TGGCGGTGGC GTTCTTGCTG TCGGCGCCAT CCTCTCTTGT 
CTTCTTTCTT GGGATGGAGG TGTTCGAGGC GGCAGGCGTA TCACCCTCGC AGTCGAAAAG 
AACGAACCCC TTGCCGGTAT TTCTCCTGCT GCTGGTCGTC ACGCTTCCCC TGCGCCTTCC 
AGCCGAACCG CAATCAGGGT CCCATCAGTC AGTTTGAGGC GAGTCTTGTC ACCCAGCCAA 
GAAGAAGAGG ATGCCGCTCA CGGTGCTGGA TATCCGGAAC TCTCTCGTAG TGCGGGCGGC 
CGAAGGGATA GTCGAGCGAG CTTAGGCACG GCTTATGGAT ACGGAGGTAT TCGTTCCAAG 
CACCCTACTT TGGCAGCTAG AGCAGCATTG GAGGCTGCTA GGAGGGCTTC AGCTGCAGTA 
GGCAGACCTG ACGAGAGTGA TGAAGAGGAC GGCGAGATGG GTAACAGGGC TCTGAAGGTT 
GCACAGAGGC TGTTGCTCGC GAATGAGGAG AACACATTTA ACATCAATGA CCTTTGGGTG 
TCTGCCGCGG TCGCCCAAGA CACTGCTGTC TTTGATGATG AGGAGGAGAC AGAGGATGAC 
CAAGAAGAGG AGGTTAACGA AGCCGTACCC GACACTTCTT TTGCCTCCCC TTCATTACAT 
GCACTTTCAC CGTCAACCTA CGATGGCCAT CAAGGTGACC TCTCCTTCCG ACGGTCTAGC 
AGAGCACGCC TCACAAGTGT GGGCAATATT TCTCTTCATC GTAACCTTCC CGGCCACCGA 
TTATCCGTAT CACATGGCGG CAGGCGATTC AGCACCACTT CAGGACACAT GCCTGCCATC 
TTCTCCAACA CTGGTGTCAA GACTCCGCCA GCTGTAGCAG CCGCATATGA AGCAGAATCG 
CCCAGACACG AAGCTGACTC ATTCTTCCGC GCAGCATCAC CTAGTCCCGA CCATGGCAGG 
GGATCCACCG GTGGCTTAAG CGCTATCGCT GAAGGGCCTG GAAATGCTGT GGACTCTGCG 
ACTGCCGGCG TTGCCGCTCA GATCTCTGAG AAAGAGGCCT CTTCGTTCTC ACTTTTGCCT 
GTTCAAGTAA TCATCCAGGT GTGTTCAAAT AATGACTTTG TTCGTCACAT AGAACTTATC 
AGTCCATTCC GATAGTATGG TCTCCTTGCT TTGCACAACA CTATCCATGA TCAAATATTC 
TTGTCATTCT TGGTAACGTA CGAGGCTTAC CTTTTGAAGT TTTGAGTAAT TGCTGATATG 
ATCATAGTCC CTACCGCTCT GGTGGTCTTG GGCTTAACCC GGCCCATTTC TCCCTGGTAG 
TCGCTCTCAT GTGTCTCTGC CAGCTCGTGT ATCAATTCTA TATTTACCCT CGACTTGGAC 
CCCCTCTCGG TCGTTTCACA CATCTTCAAA TGTTCAGGAT TGGATGTGCC CTCTACCTTC 
CTGCCTACTT CTCTCTGCCA ATCTTACACA AAATTGCTTC TCCTGACTCT GAAGGCAGTT 
TCTTTTTGAT GTTCTGTGGG TACTCCAAGT CACGACGAAG ACATTGGATC TGATTGATTC 
ATTGTAGGCT TGGTTACTAT CACTGCTGTG AGGTACTGTG CAGGTACATT CTCGTATACC 
TCCGTCATGG TACTTATTGT GAGTCGAGAC CCCCTACATC AAGTACGCCT GTTAACCCAT 
CCCTACAGAA TGCCATGTCT CCTCCCCACG TTGTTGGCCT TGCCAATGGA CTCGCCCAAA 
GCACCGTATC ATTCTCGCGT TTCTTTGGCC CTGTAATCGG TGGTGCTGTG AGTAATACCT 
TCCAGAGCAT TTCGTGGCAA CATACTGATG CCTTGTTTGT AGGTTTGGAG CGCCAGCATC 
AATGGTAATC CAAGCGGTTA TCCTTATGGC TTTTACTTCT GCACTGTAGC ATGCTTTATT 
CAGTGGTCAT TGTCATTTTT TATCCGTTAA TCAGCCATAC CCGGTGCTTG AGGAAAAGGT 
AGTTTATATT ATGGGCGCCA AGCGCGTAGA TCGTATAGTC GGGGGACCTT AATTGGTGAA 
CGACAAGAAT TTGTGAATCA TGGCAGACAT CATTAATCAC TTTTATGACC TTTTTTTTTG 
ACAGTAACGA ATATATGTGG ACTCTGCTCG CTAGAATGCG ATGGCGAGCA TATGTAGCAC 
ACTGATTTTT CTGATGATTT GAATCCGACG ACCAAAATAT A 

 

Protein sequence

MTATPPGRIA LPPKPTITDI LGGSSALASD TPSPQAHQSF NSPHSSAVNG HSRGTIPRSK 
ARTKSARLSF SSYGRGRAAS SRGPAGGIVD DLLDDEDFGP KLPTLVPGIR AAYATPLPAL 
PMIVMCIAML SELLAANLCT PFILKQVEGF FLNSGREKNS ETEAAVGLWT GNLVSVFFIT 
QFFTSLLWSS IADRHGRRAV LVASLAGSAI ALVIFGTSES LPEAICVRLI QGIFGGAVGV 
FRGSIRDLTD DTNAARAYAM LGFSWGFGGV IGPIIGGVFE SPKENFPGTA LAQIRKMTGI 
LTLFQNFPYI LPTIIGGGVL AVGAILSCLL SWDGGVRGGR RITLAVEKNE PLAGISPAAG 
RHASPAPSSR TAIRVPSVSL RRVLSPSQEE EDAAHGAGYP ELSRSAGGRR DSRASLGTAY 
GYGGIRSKHP TLAARAALEA ARRASAAVGR PDESDEEDGE MGNRALKVAQ RLLLANEENT 
FNINDLWVSA AVAQDTAVFD DEEETEDDQE EEVNEAVPDT SFASPSLHAL SPSTYDGHQG 
DLSFRRSSRA RLTSVGNISL HRNLPGHRLS VSHGGRRFST TSGHMPAIFS NTGVKTPPAV 
AAAYEAESPR HEADSFFRAA SPSPDHGRGS TGGLSAIAEG PGNAVDSATA GVAAQISEKE 
ASSFSLLPVQ VIIQYGLLAL HNTIHDQIFL SFLVTPYRSG GLGLNPAHFS LVVALMCLCQ 
LVYQFYIYPR LGPPLGRFTH LQMFRIGCAL YLPAYFSLPI LHKIASPDSE GSFFLMFCLV 
TITAVRYCAG TFSYTSVMVL INAMSPPHVV GLANGLAQST VSFSRFFGPV IGGAVWSASI 
NGNPSGYPYG FYFCTVACFI QWSLSFFIR