Gene CNI02950 details

Gene Information

• Locus tag: CNI02950
• ID: 3259556
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 800098
• End bp: 803626
• Gene Length: 3529 bp
• Protein Length: 881 aa
• GC content: 48%
• IMG OID: 638258786
• Product: transcription corepressor, putative
• Protein accession: XP_572650
• Protein GI: 58270988
• COG category: [R] General function prediction only
• COG ID: [COG2319] FOG: WD40 repeat

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.414493
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATTACAGCGA AGTTCGTGAA TACCGTGTAT TTCACTTCTT CCTCTGTAAC TTTCCAAGGA 
AGAGGATAAC TGTGAGAAGG GTATTATGAA GGTTACCAAG CCCAACTGGG TGGAACATAC 
CGGTAAGCCG TTGTTTTCAA TGGAGAGTGC TCGCTAATCT TTTTTGGTTG CAGTGGGGGA 
GAAGAAAGCC AAAACAGCCA TCTACAGCAT TTCTGTACAT CCAGATGGTA CCCGATTGGC 
AACAGGTGGC CTAGGTGCGT GGATTTATTC AATAGTTTGT CTATTCTAAT GTGAGGCCTG 
GTTTCAATTG GTAGACCATA AAGTTAAGAT ATGGTCGACG CTGCCTATTC TCGACGTGGA 
AGCAGAGAAG GAAGAAGAAA ACCCTAAGCT GTTATGCACG ATGTCTTCCC ATACCGGTTA 
ATATCGTTTT TAAACTAGTA CGACAAGGCA ACTTTGCTGA TGGAGACGCC AGGATCTGTG 
CTGTCCGTGA GGTGGGCTCA CCACGGAAGA TTCCTAGCGA CAGGATCAGA TGACCAGGTT 
ATTATGATAT GGGGTCTTGA TCCGTACGTA GAGCCTTTCT TTCACCGATA GAAAGGAAAA 
AAAAAAAAAC GCTGATCAAT GCTTCGGGGC CAGTGATGGA GGTGGTCGAC TTTGGGGTTC 
TGACGAAATT AATGTCGAAA ATTGGAAGGC TTTAACGCGA TTGGTTGGGC ATGTAGCAGG 
TATGAGACTG TCACATCCTC CTTCTCATTT GGCGTTTGAC ATTAATGTCC TATTTCAGAT 
GTTGTGGATC TAGCTTGGTC AAGGGACGAC ACCATGTTGG CATCCGTCGG CCTTGACAGT 
ACTGTCTGGA TTTGGGATGG CTTGACATTT GGTAGGACTC TTCTACACTT TTTATTTTGA 
TCAAGCTGAA GGATCATTTC TTACAGAACG ACTGAGGAAA CTTGATTTAC ATCAGGGATT 
TGTTAAAGGA GTTTGTTGGG ATCCTGTTGG GAATTACCTT GCTACCCAGG CGAGTCTAAA 
TTGCTGCGCA GTTTTATGAC AATTCTAACA CGTTCATCAC TCCTAGTCCG ACGACAAGAC 
GGTGAAGATC TGGAACACTG AGGACTGGTC ATTAGCTGAA ACCATTTCCA AACCGTTCGA 
GACATCACCG CAAAGCACAT TCTTCCGAAG ATTGAGCTGG TCGCCTGACG GTGCTTTCAT 
CGCAGCGTCC AATGCTATGA ATGGACCAGT GTTTGTTGCT GCGGTGATTG ATCGAGAGGG 
TTGGGCGTCG GATATTTCCT TTGTTGGACA CGAAAATACA ATCCAAGTGG CTGTGAGTAT 
CCATAACTCC GTAGTGATCT GTGTTGTTCA CTCGATTGTC AGGCTTTCAA CCCTCGCCTC 
TTCTTTCCTG AGGGTGAACC TAAAGGAAGA GCGACGGCTT CCAGCATGCT TGCGCTTGGT 
GCAAACGATT TTAGCATTTC CATCTGGCGA AATACACTTT ACAAGCCTTT GGTGGTGTTG 
AAAGATATTT TCGGAGCCGA CTTGATGGAC CTCTGCTGGT AAGTCTGAGC ACTGCTTGCA 
ATTGAAATGT GACCTAAATT TTATTCCTGT AGGTCAAACG ACGGATATGT CTTGTACGGT 
TCCTCCGTTG ATGGCTCAGT GTGTGCTATC CAGTTTGAAC CCTCTGAGTT CACCGACCTT 
GCCGACTTTT CTGCGACCGA ACTCGTCCTT CGAGAATACG ATTACAAACC CAAACGGGCT 
CACCAACCTC TTGCGGTTCA TTCCTCCGCT GCCTCTATCA CCAACGGCTT TGGCCCCTCC 
ACCACTACCT CCACTCATGT CAACGTCTTA CAACCTAAAA AGGGCAAAGC CAAACGCCGT 
GTGGATCTCT CTAATGGTAA CATTAACGCT GGCCCTAGTG CAGGTCCAAG CCGCCAAGCT 
CTTCGACCCC CACCACCAGT TGATCCATTC AGTGGACCTA TACAAGGTTT TGCCAGTCCC 
TCGACGGCCC AAGCGTCAAC AGCGAGGATG TTTGAAGATG CGCACCGAGC TTTTGGACCT 
GGTAGTGGAA GTATATCAGG CACCTCACCT AGAGCTGGGG ACAAGAGAAA GGCCAGCGGG 
TCATATGAGG ATCCTACGAG AGGTGTACGA GGGAGGGGCA TGCCCGTACA GCAACCAATT 
CAGCAGTTTG AAGTCCAAAT TATCCGAGCA CCTATGGTGG CACCTTCTCC CTCGGATGCT 
GGTCCATCAA AAGCCTATCT CCCGTACCCT CAAGTACAAT CAATTTTGCG GGCCCAAGCT 
ATTGGGAATG AAAGTCGTAG TATCTATCTC GAAGCCCGAA ATACTTCAGA TCCGAAAGGG 
GAAAATGTGC TTTGCTACTT TGCAGACGGT GAACAGAGGT GGATGGATTA TTTGCCGAAA 
GCGGCTTTGG CGGTTACTGT CACGAAGAAT TTTTGTGCGG CGGCTTGCGA GGATGGTAGT 
CTGAGGGTGT ATTCCCCTGC AGGACGATTG TGAGTCACAA CCTGTGTCTG ATGTGGATCA 
CTCAGTTGAT CACGGAACAG GATACTAAAC ATGAAATTAT CGGGCTTGGT GTATGACTTA 
CAAGGGGAAG ACAAGATGCT GTTGATTATA ACAATGGATT GTCAAGTGCG CGTCATGTAA 
GCTTTTCTAA GATTCCTTTT GACACATGTA GAAGCTGATA GCCTTGCTAG AAACGTCCGC 
AACGGCAAAG CATTTTCCCC ACCGTCGAGC ATCCACCATC TTCTTTTCCC GGGATCATCT 
TCATTCCATT CTTTTGACAT CATTTCATGC ACTGTCCGAC CTAATGGTGT TCCTGTGATC 
ATCACTTCCG AACCTCAAGC CTTTGCTTAC GACGCATCCT TGCATGAATG GAGCACCATT 
GCCTCCCCCC CTATTGCTGG CATCCAGCCT TTGCCGAGTG GCCCTTCAGG TCCTCTCTCT 
GTTGTTGATC AGATTGTCGC CAAGTCGGCA CCAGTGACGA CGACTGAAAA GAGTAATGCA 
CCTTGGATAG AAGAATCATA TGTCATGTCA CAGTTTGAAA TGAAACTTCG AGGGACGGTG 
CTGTTGGATT CAAAGGAGGA ACACAAACAC TGGTTACTGG GGTATATGAA ATATTTGGGA 
GATGAGAACT TTGCGGAAAG GGCTGGAGAG GTGATGAAGG ACCTCATTGG CCCTGTATAC 
CAGTAAATGA CCCCCTCAGC ACTATCTATG CGGGCTGACG GCTGCATTTT AGTCAATCGA 
AACCCACCGG ATGGGAACCC AAACTCTTGG GTGTTGATAA GCGTGAAATA GCGGCGGAAG 
TGTTGGATGT GCTCTCGAAG ACATTGCAGG GCAAAAATGT AGCATCGGTG TGGTACGATG 
TGCTAGATAA GATGAAGGCA GACGAGGGAT CCTGGTAGTT GTAGGTCGCT TCCCCCAAAG 
ACTTATCGGC GTGCTGACCA TTTGTTAGGT AAAACAATAT ATGGTATACT CAATGAACAC 
GTTTACATGC ATCTTTCTCC TGGCCTTTGT CTTCTTGAAG CTTCTCAAT 

 

Protein sequence

MKVTKPNWVE HTVGEKKAKT AIYSISVHPD GTRLATGGLD HKVKIWSTLP ILDVEAEKEE 
ENPKLLCTMS SHTGSVLSVR WAHHGRFLAT GSDDQVIMIW GLDPDGGGRL WGSDEINVEN 
WKALTRLVGH VADVVDLAWS RDDTMLASVG LDSTVWIWDG LTFERLRKLD LHQGFVKGVC 
WDPVGNYLAT QSDDKTVKIW NTEDWSLAET ISKPFETSPQ STFFRRLSWS PDGAFIAASN 
AMNGPVFVAA VIDREGWASD ISFVGHENTI QVAAFNPRLF FPEGEPKGRA TASSMLALGA 
NDFSISIWRN TLYKPLVVLK DIFGADLMDL CWSNDGYVLY GSSVDGSVCA IQFEPSEFTD 
LADFSATELV LREYDYKPKR AHQPLAVHSS AASITNGFGP STTTSTHVNV LQPKKGKAKR 
RVDLSNGNIN AGPSAGPSRQ ALRPPPPVDP FSGPIQGFAS PSTAQASTAR MFEDAHRAFG 
PGSGSISGTS PRAGDKRKAS GSYEDPTRGV RGRGMPVQQP IQQFEVQIIR APMVAPSPSD 
AGPSKAYLPY PQVQSILRAQ AIGNESRSIY LEARNTSDPK GENVLCYFAD GEQRWMDYLP 
KAALAVTVTK NFCAAACEDG SLRVYSPAGR LILNMKLSGL VYDLQGEDKM LLIITMDCQV 
RVINVRNGKA FSPPSSIHHL LFPGSSSFHS FDIISCTVRP NGVPVIITSE PQAFAYDASL 
HEWSTIASPP IAGIQPLPSG PSGPLSVVDQ IVAKSAPVTT TEKSNAPWIE ESYVMSQFEM 
KLRGTVLLDS KEEHKHWLLG YMKYLGDENF AERAGEVMKD LIGPVYHQSK PTGWEPKLLG 
VDKREIAAEV LDVLSKTLQG KNVASVWYDV LDKMKADEGS W