Gene CNI02520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI02520 
Symbol 
ID3259641 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand- 
Start bp685590 
End bp686720 
Gene Length1131 bp 
Protein Length260 aa 
Translation table 
GC content47% 
IMG OID638258744 
Productconserved hypothetical protein 
Protein accessionXP_572868 
Protein GI58271424 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID[TIGR00729] ribonuclease H, mammalian HI/archaeal HII subfamily 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCC CTATTGACCC TGTAAACTTG GATCCTGTTC CTCCATTGAG TGACTCTTAT 
GTCTTCCACT CGTCTCTTCC CGCTGCAGAG CAAACTCCCG GGGAGGGCTG GATTATGGGT 
ATCGATGAAG CAGGTCGAGG CCGTAAGTCG AATACTTGCC TTCAATATGG AGCGTGCAAA 
GCTGACAAAA GGTATTTTAG CTGTACTTGG TATGGCAACT GTATTAATTA CCTGCCACCG 
CTCGCTGATA CTGTCTAGGA CCAATGGTGT ATGCCGCAGC TTATTGCCCT TTGTCATTTA 
AACCTATCTT GGAGAGCATT GGTTTCGACG GTGAGTAAGA TGGTATCTAG GACACAGGGA 
TATTGATGAT CATCAGACTC TAAGGCACTA TCCGCTGAAA CTCGGCAGAC CCTCTGGGAA 
TCTTTTGGCG TCCACCCTCC CTTGTGTTAT TCTTCGTCAA CCTTATCGCC CCAAGACATT 
TCATCCAACA TGCTCCGTAA AGTTCCCATA AATCTCAATA GACAAGCAGA GGTAATCGAC 
ATATTTCATA AAGTATAGAG CACCCCTGAC AATGATGCTA GGATGCTACA GTGGGCCTGA 
TCCAGGCAGC CTTAAATAGA GGCATCAACG TTACTGAGGC GAGTTTTTCC TGTTCTTTGG 
CGGCATCTTG TTGGTTGACG ATATGTCTCA AGTGTTACGT CGATGCCCTT GGCCCTGCCC 
CTCAATGGCA AGCCAGACTT ACTGCAATAT TTCCTACTAT CAAATTCACG GTTTGCCCCA 
AAGCTGACAG TCTATTCAAA ATCGTCGGTG CTGCATCGAT TGTGGCCAAG GTCACAAGAG 
ATAGATATGT CCACGGCTGG GTTGATCCTG AGGATGTCAT CCATAGGTTC GTCTCTTCCA 
CTGATCGCAA ACTTGGTGTT CACCTGTTTG AACAGTGCTA CCCATATCAA GTCACAAGAC 
GAAGAGGAAG TTATAAGAGG CAGCGGTTAT CCATCCGACC CGAAGACCCA AGCGTACCTT 
AAGGGATCCA TAGATCCGGT ATTCGGCTAC AAGGGCATTG TCAGATTTTC GTGGGCAACT 
GTCAAAGTCC TCCTCGATAA ACAAGGTGTG GAAAGTAAAT GGTCAGCTTG A
 
Protein sequence
MSTPIDPVNL DPVPPLSDSY VFHSSLPAAE QTPGEGWIMG IDEAGRGPVL GPMVYAAAYC 
PLSFKPILES IGFDDSKALS AETRQTLWES FGVHPPLCYS SSTLSPQDIS SNMLRKVPIN 
LNRQAEDATV GLIQAALNRG INVTECYVDA LGPAPQWQAR LTAIFPTIKF TVCPKADSLF 
KIVGAASIVA KVTRDRYVHG WSQDEEEVIR GSGYPSDPKT QAYLKGSIDP VFGYKGIVRF 
SWATVKVLLD KQGVESKWSA