Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI02040 |
Symbol | |
ID | 3259764 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | - |
Start bp | 561681 |
End bp | 563066 |
Gene Length | 1386 bp |
Protein Length | 342 aa |
Translation table | |
GC content | 50% |
IMG OID | 638258690 |
Product | dihydrodipicolinate synthase, putative |
Protein accession | XP_572656 |
Protein GI | 58271000 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.602219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGTCAATTCA TTCACGAGGT AAGTTAGAAT AGTCCCATAT AGGCTACGAC CAGTCATTGA CCTCAATAAA AGTCTCGCAC CTCTTCCCTC TAAAGCTCAG TCAAATCCAC TCGAAAAACA TACCTCCAGT CATGACTACC AACAATACCT CTAGCGGCGC GCCTTCTCGA GTTTGGGCGG GCGGTCCTTC AGTCCCTTTG GTTACTGCCA TGAACGACGA TGAGAGTATC AACTACGAAG CATTGGCTAA ACAAACCGTC CGATTGGCTA AGGCCGGTCT TGGTATCGTC TTGCTCGGCA CCAATGGAGA AGGTCAGTCA CACAAGTGTG AGAAATGAGC ATAGTCTAAT TTTGATTCAA TTTCAGCTTC TCATCTCTCT CCTGAAGAAC GCAAACAGTG CACTGTTGTT GTGCGAAAGG CACTCGACGA TGCTGGCTTT GTCAACGAGC CGCTCCTTGT TGGTACCGGA GCTGGATCTG CCCAGACAAC CATCCAGGTG ACTAAAGAGG CTGCCGAGGC CGGTGCGAGC CATTCCATAG TCATCACCCC TGGCTACTTC TCTTTTGCCA TGGGCCGAGA CCGTAAGGCC ATCAAGGACT TCTTCCGAAA GGTCTTTGAC GAGTCTCCTA TTCCCGTCAT GATTTACAAC TTCCCGTAAG TGCAATTAGG ATTATATTCC TTTGAGCCGC ACTCATATCC TATTAGTGGA GCTGCTGCCG GCATCGATTT GACTTCTGAT GAGATTATCG AACTCTCCAA CCACCCCAAC TGCTTTGGTG TTAAGGTTCG TCGATTCACG TTACCTTCTT ATTCTCTCAA ATCTGATTTT TTTTTTCTTT TTACTAGCTC ACTTGCGCTA TGATCGGTAA AGGTCACCGA ATTGCCGCCT ACACTCAGTC CCCTGAATAC CTCGCCAAGC ACGGCAGCTT CCTTAAGAGC TGCACTGCCA CCGGCCAGTT CCAGGTCCTT CCCGGTTTCT CGGAAAGCAC CCTTCCTGCC CTCGTTTCCC GACACACTGG TTGCATCACT GGTACCGGTA ACACCATTCC CAAGACCATC CGACGACTTT GGGACAAGTC TGTTGCCGGT CTTCAGGGCG ACTCCAAGGC GCTCGCTGAA GCCATGGAGT TGCAAGACCG AGTTGCAGAG GCTGATTGGA CTATTGTGAA GGCCGGTATC CAGGGAACGG TGAGTAATCA GCCGATCCCA TCATGGCAAT CGCTCATCGT TCTTGTTAGA AATACTTCCT CGACCACTAT GTCGAGAAGG GTATGGGCGG TGCTGTCCGA CTACCCCTCG GTACAATCTC TGATGACGTT AAGAAGTTGA TTGAAGTTGA TCTCAAGGGC GCTTGGGAGT TTGAGCAGTC TTTGTAACGC ATGCAA
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Protein sequence | MTTNNTSSGA PSRVWAGGPS VPLVTAMNDD ESINYEALAK QTVRLAKAGL GIVLLGTNGE ASHLSPEERK QCTVVVRKAL DDAGFVNEPL LVGTGAGSAQ TTIQVTKEAA EAGASHSIVI TPGYFSFAMG RDRKAIKDFF RKVFDESPIP VMIYNFPGAA AGIDLTSDEI IELSNHPNCF GVKLTCAMIG KGHRIAAYTQ SPEYLAKHGS FLKSCTATGQ FQVLPGFSES TLPALVSRHT GCITGTGNTI PKTIRRLWDK SVAGLQGDSK ALAEAMELQD RVAEADWTIV KAGIQGTKYF LDHYVEKGMG GAVRLPLGTI SDDVKKLIEV DLKGAWEFEQ SL
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