Gene CNI02040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI02040 
Symbol 
ID3259764 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp561681 
End bp563066 
Gene Length1386 bp 
Protein Length342 aa 
Translation table 
GC content50% 
IMG OID638258690 
Productdihydrodipicolinate synthase, putative 
Protein accessionXP_572656 
Protein GI58271000 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.602219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGTCAATTCA TTCACGAGGT AAGTTAGAAT AGTCCCATAT AGGCTACGAC CAGTCATTGA 
CCTCAATAAA AGTCTCGCAC CTCTTCCCTC TAAAGCTCAG TCAAATCCAC TCGAAAAACA
TACCTCCAGT CATGACTACC AACAATACCT CTAGCGGCGC GCCTTCTCGA GTTTGGGCGG
GCGGTCCTTC AGTCCCTTTG GTTACTGCCA TGAACGACGA TGAGAGTATC AACTACGAAG
CATTGGCTAA ACAAACCGTC CGATTGGCTA AGGCCGGTCT TGGTATCGTC TTGCTCGGCA
CCAATGGAGA AGGTCAGTCA CACAAGTGTG AGAAATGAGC ATAGTCTAAT TTTGATTCAA
TTTCAGCTTC TCATCTCTCT CCTGAAGAAC GCAAACAGTG CACTGTTGTT GTGCGAAAGG
CACTCGACGA TGCTGGCTTT GTCAACGAGC CGCTCCTTGT TGGTACCGGA GCTGGATCTG
CCCAGACAAC CATCCAGGTG ACTAAAGAGG CTGCCGAGGC CGGTGCGAGC CATTCCATAG
TCATCACCCC TGGCTACTTC TCTTTTGCCA TGGGCCGAGA CCGTAAGGCC ATCAAGGACT
TCTTCCGAAA GGTCTTTGAC GAGTCTCCTA TTCCCGTCAT GATTTACAAC TTCCCGTAAG
TGCAATTAGG ATTATATTCC TTTGAGCCGC ACTCATATCC TATTAGTGGA GCTGCTGCCG
GCATCGATTT GACTTCTGAT GAGATTATCG AACTCTCCAA CCACCCCAAC TGCTTTGGTG
TTAAGGTTCG TCGATTCACG TTACCTTCTT ATTCTCTCAA ATCTGATTTT TTTTTTCTTT
TTACTAGCTC ACTTGCGCTA TGATCGGTAA AGGTCACCGA ATTGCCGCCT ACACTCAGTC
CCCTGAATAC CTCGCCAAGC ACGGCAGCTT CCTTAAGAGC TGCACTGCCA CCGGCCAGTT
CCAGGTCCTT CCCGGTTTCT CGGAAAGCAC CCTTCCTGCC CTCGTTTCCC GACACACTGG
TTGCATCACT GGTACCGGTA ACACCATTCC CAAGACCATC CGACGACTTT GGGACAAGTC
TGTTGCCGGT CTTCAGGGCG ACTCCAAGGC GCTCGCTGAA GCCATGGAGT TGCAAGACCG
AGTTGCAGAG GCTGATTGGA CTATTGTGAA GGCCGGTATC CAGGGAACGG TGAGTAATCA
GCCGATCCCA TCATGGCAAT CGCTCATCGT TCTTGTTAGA AATACTTCCT CGACCACTAT
GTCGAGAAGG GTATGGGCGG TGCTGTCCGA CTACCCCTCG GTACAATCTC TGATGACGTT
AAGAAGTTGA TTGAAGTTGA TCTCAAGGGC GCTTGGGAGT TTGAGCAGTC TTTGTAACGC
ATGCAA
 
Protein sequence
MTTNNTSSGA PSRVWAGGPS VPLVTAMNDD ESINYEALAK QTVRLAKAGL GIVLLGTNGE 
ASHLSPEERK QCTVVVRKAL DDAGFVNEPL LVGTGAGSAQ TTIQVTKEAA EAGASHSIVI
TPGYFSFAMG RDRKAIKDFF RKVFDESPIP VMIYNFPGAA AGIDLTSDEI IELSNHPNCF
GVKLTCAMIG KGHRIAAYTQ SPEYLAKHGS FLKSCTATGQ FQVLPGFSES TLPALVSRHT
GCITGTGNTI PKTIRRLWDK SVAGLQGDSK ALAEAMELQD RVAEADWTIV KAGIQGTKYF
LDHYVEKGMG GAVRLPLGTI SDDVKKLIEV DLKGAWEFEQ SL