| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI01070 |
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| Symbol | |
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| ID | 3259786 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | + |
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| Start bp | 264329 |
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| End bp | 270051 |
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| Gene Length | 5723 bp |
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| Protein Length | 1519 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258592 |
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| Product | transcription regulator, putative |
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| Protein accession | XP_572827 |
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| Protein GI | 58271342 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGT CTGACACTCA GACGGGTGTC GGAATATCCG CTTCCTCATC GGTCATATCC
TCTCAGAGCG TAAGCCCGTT GCTCAATTAT GACAAAAAAT GTTCATACGC TGACTGTTCT
CTCTAGCCCT CTTCCAAACC CTCCTCAACT CACAGAATCA CACTGCGAAT GCCTCAGCAA
CCAGAGTCTA CTGCTGACCT TGATTCTGAG TCTGAATCAC TGACGCCTAG TCCCGAAGAA
ATCAACATCG GGCAGGGCAT TGGGGAAGAA GTCAGTGACC AAGAGCGAGC AGGAGATGAT
GAAAGTGAAG GAGAAGCCGA GCAGGATGAC TTTAATTATG ACGAGGAGGA AGAAGAGGAT
TACGATGAGG ATGAATTAAT GGAGGAAGGG GATGATGATG ACGACGATGA TGATCCTAAC
TTCGGTGAGA GGAAGAAGAA GGCCAAAAAG GCGAGGGTCA AGATGGACAG CGACCGGCCG
GTAAAGCAAA AAAAGTGTAA GTGTTCTGAC TGCAAAGACT TGAAACGTAA ACTGACCCAA
TCTTCACAGC TGCCGGTGCT TTTCCTATGC GCAAGCAAGT AGACGAATCC TCCGATGAAG
ATTACGGGAC AAAGGCGCAC AAGAAAAAGT ATTTTTCTAA GACTGGAGTC TCACGCAAAG
CCACTCCAGG TACTCCATAC TCTGAAGACA ATGCGTTCAG GCGCGGAGCC GCCAAGAGGG
TGGTGACATA CAACGAGGCC GATGTGGACT ATGGACTTGA GAGCGAGGAT GAAGCGGGAG
ATACTGGTTA TCACTATACC GCCGGTGCCC CTGCGGAAGG TGTGTTACTA ATGGTTATGC
CTGGTGACAG GAACTGATTT GTTCTTTTTT TTTGTAGCCG AGCCAGCTGA CGAGATTGAC
CAAGTCATGT TTCACTGGCG AGATGAAAAC CACAAGGATG ATCCCAAGGA TATTCCTCAA
GTCAACCTTG TAAGTGGTGT CGGTATGTTG TGTTTGACAC TTCTGATCAT CGATTTACAG
CGATTCCATA TCAAATGGAA AGACTACTCC CACATTCACA ACACCGACGA AACATATGCC
TTCCTCAAAA ACTACAAGGG TTTCAAAAAA GTCGAAAACT ACATTACGAA AGTATGGACA
ATTGATCAAC GTTACCACCA TCCTGAACCC GATGCTGCTT GGAAACCCAC TCAGGAAGAG
ATGGAGCAGT ATGAGATCGA CAAGGAAAGG ATCAAGGAGC TGCAGGAGAG CTATAAGATT
GTGGAACGAG TTTTGGATGA AAAGGAAGAG AAGCGAAAAG AAGGTCGAGC AACGTTGTTC
TTTGTCAAAT GGACGAGTGA GTCACTCTGT AACCAAAACC CAGAACCAAT CGGTGACATT
CTACGTAGAC CTTCAATATA GCGACTGCAC CTGGGAAAGT GAGTGCGCAT GCCCGGAATT
CTGGCTGACA ATTGTAGCCT ACGAGGATGT AATGGAATGC CAAGGTGCCA AAGAAGGCAT
CGAGGAATTC CATCAGCGTC AAGCTCGAAC AACTATCCCT GCCCGATCGA TCAGCTATGG
TATCGACAAT AGGCCTACCT ATCAGAAGAT TCCTGAGAAC CCTCCTTACC TTGCGTGCGG
CGGTGCTTTG AAACCGTTCC AGCTTACTGG GTTGAACTGG CTGGCGTACG TATGGAGTAA
GGGCGAGAAT GGTATTCTTG CCGATGAAGT AAGTGCTTCC TCTTTGCATA GATTTAATGG
AAGGAAAGAT GCTGATGAAG CTGTTCCTTC CACTTGCAGA TGGGTCTTGG TAAAACCGTC
CAATCCGTCT CTTTCCTCTC ATATCTCTTC CACGTCCAAC ACCAGTATGG CCCTTTCCTT
GTTGTTGTCC CTCTATCGAC CATCTCCGCT TGGCAAGCCC AGTTCAAAAG GTGGGCGCCC
GAATTGAACG TCATTTGTTA TATGGGTTCG GCCAGATCTC GAGACGTCAT TCGACAGTTT
GAATTTGGAC CACTGAAGAA TTTGAAGTTC AACGTCCTTC TTACGACGTA TGAGTTCATT
CTCAAGGATA GACAGGATTT GCAGCAGATC AAGTGGCAAG TCTTGGCTGT GGATGAGGTA
AGTCCTTGGC CAATGGTTTG ATGAGGAGGA GCGTGGAATG AAAGGCTGAT TGGCGTGAAT
TAGGCGCATC GGCTTAAGAA TCACGAGTCT CAGCTTTACG AGGCGCTCAA GAGTTTCTGG
AGTGCCTCCA AGTTGTTGAT CACCGGGACC CCGCTTCAAA ACAACGTCAA GGGTGCGTCC
TCCGCCATAA ATTGGAAATG ATATGGGCTA ATATGTTGTA CTAGAACTCC TCGCGCTGAT
GCACTTCTTA ATGCCTGAGA AATGTAAGTG CCCGAAAGCA GATGAATAGG GTTATGCTGA
ACGTGTCCTA GTCCAACTCG CCAACGACTT TGACCTCAAC GATGCGAGTG AAGACCAGGG
AGCCAAGATT AAGGATCTCC ACGACAAGCT TACCACGCTC ATGTTACGGA GGTTGAAGAA
GGATGTCGTC AAAGAGTTGC CTACGAAATC CGAGAGGATT CTCCGAGTGG AAATGTCTGC
CATGCAGACG CATTACTACA AGAGTAAGCC AATGGTTACT CATTTGACGA TTGGTCAGAG
TGGAACTGAT CGCCCATAGA TATCCTGACG AAGAACTTTG CGGTCTTGAG TAAAGGTGGC
ACTCAACAAG TCAGCTTGAT GAATGTTGCG ATGGAGTTGA AAAAGGCCTC GTAAGTGCTA
TATCGCAGTC GCGACAAGTA TCTGAGCTCA TACGTGTCAT CACAGGAACC ACCCCTACCT
CTTTGAAGGA GCAGAGGACC GCAGCAAACC TGCCAACGAA ATTCTTCGTG GTCTCGTCAT
GAATTCTGGC AAGATGGTCT GCCTTGACAT GCTTCTCTCA CGACTGAAAT CCGATGGTCA
CCGTGTCCTT ATCTTCTCTC AAATGGTTCG TCTGCTCGAT ATCATCTCGG ATTACATGAC
AGCCAGAGGT TATGTGCATC AGCGTTTGGA CGGAACGGTG CCCTCTGATG TGAGGAAGAA
GTCGATCGAG CACTTTAACG CGCCTGGCTC TCCCGATTTT GCCTTTTTGT TATCCACCAG
GGCCGGTGGT CTTGGTATCA ACTTGGAGAC GGCTGATACG GTCATCATCT TTGACGTAAG
TTGCTGCAAT TCGCAGAGTT TGATAGATAG CATGACTGAT AGCGTTGATT TTGTAGTCGG
ACTACAATCC GCAGAATGAC TTGCAAGCCA TGGCCCGAGC ACATCGTATT GGTCAGCAAC
GCCATGTCAG CATTTTCAGG TAGGCGTTTT GACTTCCTGA CGACGTCTTA GTGCTGATCA
AGTTACAGAT TGGTATCAAA AGGAACTATT GAAGAAGATA TTCTTGAACG GGCCATGAGG
AAAATGCTCT TGGAGTATGC CAGTAAGTGA CCCGTGGTTC ATAATCCGCA CTCGTACTAA
GACAGTTGGT AGTTATCAAC AAAATGGACA CCACTGGTGC CCATATCAAC GGTAGTTCCA
CTCCCAAAGA CAAGAATGTC GATCTTTCGA AAGAAGAACT CTCGGCCATC CTCAAGTTTG
GTGCTCGTAA CATGTTCAAG ACCGATGATA GCACGCAGAA CAAGAAGCTC GACGAAATGA
ACCTCGACGA TATCCTCAAC AATGCCGATG CCTTTGATAC CGAATCAGCC GCTGCTCCCG
GTACAACATC TCTGGGCGGT GAGGGCTTCT TGTCGCAGTT TGCTGCTATC CAAGATGTGA
AGGCGGATGT GGACAACTTG TCTTGGGACG AAATCATTCC CGAGGATGAA CGAGGCAAGG
CTGAGGAGGA AGAAAATGCG GCTGCGACAG CAGAGATAGT CGCTGCAAGT TCAAGAAAGC
GAGCAGCGGC CAAGGCACCG GGGACGTATC AGGATATGGA TCTCGATGAC CACGACGGAA
GCAGCAAACC CGGTTCACCC AACGACAAGA AACCTAAGGC TCCGGGGCAG CTCAAGAAGA
CCCCAGCACA ACGTGCACTG GAGTTGAAGG ACCGTGATTT GCGAGTGCTA ATCCGAGGTA
TCCAAAAATG GGGTGATATC CGTTCGCGAT ACGAGCCTAT TGTCAAGGAA GCGAAGTTGG
AGAACAAGAA TCGGGTTGTC ATCATCCAGA CCTGCGAAGA TATCATCACG CACGGCGAGC
AAACTATCGC GGCTCATAAA GCGCATATTC GAGACCTTCA AGAACGTGGT GAACCTATAA
GTTCTTCCCT TCGTCAAAAG GCTATCTTGT TCACGTACAA AGGTGTTGCC TCTATCAACG
CGGAAACTGT GGTAGCGAGA TATTACGAGT TGAAGGCGCT CGTAGAGCAT TTCAAGAGAG
TGGAAGATTT CCCGTCTTAC ACAATCCCTC ATGACAGCTT GAAGCCCACA ATGAACTGGA
CAGTGGAGTG GACGGCAAGA GAAGATTCTC AGCTGCTGGT TGGCATCTGG AAACATGGTT
TTGGGAGCTG GGAAGCAATT GCTCATGTGA GTGCATATTA GTAGGTTTGT AAGTGTAGAG
AAACTGACGA TGGAATAGGA CCCGGAGCTT CATCTCAATG ACAAGATCTT CCTAGAAGAC
CCCAAGGCCG CCAAGCTTGA CCCTAACGCT CCTAAGCCTG GTGTTCCTGG CCCTGTCCAT
CTTCAACGAC GTGGTGACTA CCTTTGTAAG TTGTAAATTT TTTTGTAGCG GCACGGCATA
CGTGCTGACT GAAAGCTAGG TGGTATCATC CGGGAGTACG AAGAGAACCG TCGCATTCTG
GTAGAACAAC AAGCTATGAT TGCCAGTTTG CCGGCTAAAG AAGGATTCGG CTTTGAACAT
CCACCTTTGC CGTCAATCGC TGGACCTTCG AAAAAGCCTA GTCCTTCAAT CGCGAGTTCT
AGTAAAGATA GGGATTCAGG CAAGGGTAAA AGACGGAAAA CTCCGGAATA CACGGACTCG
GAGGATGAGT CTAGTTATGA GTCGATGGAC GAAGATGCTG TCAAGGAGTT ATTGAGACCA
GCAAAGAAAC ATCTTGTACG TCATCAAATA GTTCTTTTCC GCATACATAT TTTGCTGATC
TGTATCGTTT GCAGAAAAAG CTCAAATCTG GTACTGAGAA TCTCAGTCGA GAGGAGAAGA
TTGTTGCTCT CAAAGAATGC CTGGCAGGTA TTGGTGCACG TATCGATGAA GTGGTGGCAG
AAAAGGCTGC GGAAGGGCAA AATGCTACGA AGTGGAGAAA GCATTGCTGG GTGTAAGTCT
GTAATTTTAT TATTTCACAC GCAAATGCTG ATAGATGGAG CAGGTTTGCT TCATTTTTCT
GGCCAAGACA AGGTGTCAAC TACTCGAAGC TTATGGAAAT CCACGGGAAG ATGGTGGTAT
GTATCGAGGT AGTATTCTTT AGAGCACCGC TGACAGATGG TTGCAGAATG AGTCCGGCCC
AACGACGAGT AAATCAAAGG CTAAGCCGAA ACGGAAGACT GAAGATGACC CAAGTAAGCC
GAATAAGAAG CCTAGGCTGT CGGATAGCCA AAAGGAAATT AAGGTTGAGG GCTCGTCTGG
GGAGCAACTG TAAAAGTGCA TGCCGAGGAC TCAACGGACA AAGCTAAGAC TAAAATTCGG
CTTTTATTTT TCGTTTTGTC TTGGTTTATA TGGTGGCTGG TTCCTCTGCC GTTTCTTTTA
TTTTACTTGC ATTGGGCATT TTT
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| Protein sequence | MLASDTQTGV GISASSSVIS SQSPSSKPSS THRITLRMPQ QPESTADLDS ESESLTPSPE
EINIGQGIGE EVSDQERAGD DESEGEAEQD DFNYDEEEEE DYDEDELMEE GDDDDDDDDP
NFGERKKKAK KARVKMDSDR PVKQKKSAGA FPMRKQVDES SDEDYGTKAH KKKYFSKTGV
SRKATPGTPY SEDNAFRRGA AKRVVTYNEA DVDYGLESED EAGDTGYHYT AGAPAEAEPA
DEIDQVMFHW RDENHKDDPK DIPQVNLVSG VGMLCLTLLI IDLQRFHIKW KDYSHIHNTD
ETYAFLKNYK GFKKVENYIT KVWTIDQRYH HPEPDAAWKP TQEEMEQYEI DKERIKELQE
SYKIVERVLD EKEEKRKEGR ATLFFVKWTN LQYSDCTWET YEDVMECQGA KEGIEEFHQR
QARTTIPARS ISYGIDNRPT YQKIPENPPY LACGGALKPF QLTGLNWLAY VWSKGENGIL
ADEMGLGKTV QSVSFLSYLF HVQHQYGPFL VVVPLSTISA WQAQFKRWAP ELNVICYMGS
ARSRDVIRQF EFGPLKNLKF NVLLTTYEFI LKDRQDLQQI KWQVLAVDEA HRLKNHESQL
YEALKSFWSA SKLLITGTPL QNNVKELLAL MHFLMPEKFQ LANDFDLNDA SEDQGAKIKD
LHDKLTTLML RRLKKDVVKE LPTKSERILR VEMSAMQTHY YKNILTKNFA VLSKGGTQQV
SLMNVAMELK KASNHPYLFE GAEDRSKPAN EILRGLVMNS GKMVCLDMLL SRLKSDGHRV
LIFSQMVRLL DIISDYMTAR GYVHQRLDGT VPSDVRKKSI EHFNAPGSPD FAFLLSTRAG
GLGINLETAD TVIIFDSDYN PQNDLQAMAR AHRIGQQRHV SIFRLVSKGT IEEDILERAM
RKMLLEYAII NKMDTTGAHI NGSSTPKDKN VDLSKEELSA ILKFGARNMF KTDDSTQNKK
LDEMNLDDIL NNADAFDTES AAAPGTTSLG GEGFLSQFAA IQDVKADVDN LSWDEIIPED
ERGKAEEEEN AAATAEIVAA SSRKRAAAKA PGTYQDMDLD DHDGSSKPGS PNDKKPKAPG
QLKKTPAQRA LELKDRDLRV LIRGIQKWGD IRSRYEPIVK EAKLENKNRV VIIQTCEDII
THGEQTIAAH KAHIRDLQER GEPISSSLRQ KAILFTYKGV ASINAETVVA RYYELKALVE
HFKRVEDFPS YTIPHDSLKP TMNWTVEWTA REDSQLLVGI WKHGFGSWEA IAHDPELHLN
DKIFLEDPKA AKLDPNAPKP GVPGPVHLQR RGDYLCGIIR EYEENRRILV EQQAMIASLP
AKEGFGFEHP PLPSIAGPSK KPSPSIASSS KDRDSGKGKR RKTPEYTDSE DESSYESMDE
DAVKELLRPA KKHLKKLKSG TENLSREEKI VALKECLAGI GARIDEVVAE KAAEGQNATK
WRKHCWVFAS FFWPRQGVNY SKLMEIHGKM VNESGPTTSK SKAKPKRKTE DDPSKPNKKP
RLSDSQKEIK VEGSSGEQL
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