| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI01000 |
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| Symbol | |
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| ID | 3259446 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | + |
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| Start bp | 245948 |
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| End bp | 248965 |
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| Gene Length | 3018 bp |
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| Protein Length | 748 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 638258585 |
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| Product | DNA helicase, putative |
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| Protein accession | XP_572723 |
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| Protein GI | 58271134 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.359255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGACGAGCCG AAAAGTACAA AGTAGCTTCG CCCAATCAGA CAGAATGACC TTGGACATCC
TCCAGCCCAA GCCGACTCCG GACGCCTCCG TCCAGTCATT TCTGAATAGG CATAAACAGC
TTTTGGAACT GGAGAGAAAG GCAGAGGAGG AGCAGACAAG ACTGCTCAAC TCGAAATGTT
CGCCTTCTCT GCTTGAGCAG AGAGGTCTGG CTTTGAATGG TTTAGGGGTT TCTGGTATTA
GCATTGGACT AGGAGGGAAA AGGTAACTTC AAGAAACAGA CTTTATAATG AGGAATAAGT
GTGATACTGA CGATTTATTA GTTTAATCGA GCTCCATAGG CCTTTGGCAT ACCACACTTC
GCCAGCGTTG CCTCCACACA CGTTTCGTCC AGGAGACCCA GTGCGTATAG AAGCGCACGT
GGCCACTACA TCTGGCAAGA GCAAAGGAAA GAAAAGAGAA TCAGAAGATG AAGGTGCTGT
GGAGGGTGTA GTCTATCGGG TCGGGCCTGA AAAGGTGGTC GTCGCCGTGA ATGAGTCGAA
AGAAATAGAT CTGCCAGAAA GATTGAGGCT GTAAGTGCCT TCTTTTTTGT GTGACGGGTA
GTATGCTCAT ACGTATTCAG ACTCAAACTT GCCAATTCAG TCACCTTCGA TCGCATGGAA
AAAACTTTGG CACACCTTGA ACGTTTGGTG CTCCCTTCAG GAGGAACTCC TTCACCTCCA
TCTTTCAACA TGCCGCTTGT ACAAGCCCTT CTCGGTAAAC AACTGCCAAC ATGGAAGGAA
ACAATACCTC CTCAAAATAA TATAGAACCT TTGGGGCAAC TGTCATCTGA TGAGGACATG
AAGTGGTTTG GCCAACATTT AAATGACAGT CAGAAAGAAA GCATCAAGTT CTGCCTAAAA
GCAAATGAGG TCGCTTGTAT TCATGGTCCA CCAGGAGTAA GTTTGGGTTG GTTTCTGTAG
CTTCCGTTAT GTATCTAAAA TCACTCCCAT CAACAGACTG GCAAAACACA TACACTTGTC
GAACTCATTT TCCAGCTTCT CTCTCGACCT GCTGCCCCAA ACACTACGCT TCCACCCCGT
ATCCTCATCA CGACCCCGTC AAATTTGGCT CTCGATAATT TACTTATCCG TCTCCATATT
CTGGCACAGC AACCACCTTA CAGCTCTCTC CTCCCACGCA ACTCATTTCT TCGTATGGGG
CATCCTACTA GAGTCCACCG AGATCTCGTA AAAGAGACTT TAGATTGGAA AGCAGCAAAC
GGTGACCAGG GTGAACTATT GAAAGATGTG GGAAAAGAAA TGCAAGGTCA CCTTGATGCT
TTGGGCAAGA AGAGAGGTGA AAAAGGTGCC GTAAAAGGGA AAGAAAGAGG GAAGAAATGG
GGAGAAGTCC GAGAGTTGCG TAAAGAGTGC GTTTTGGCTG TCCTATGGGC ATTTTGTAGC
TAACACGTCT GTAGATATCG TCAGCGAGAG GGCAAAGTTG TCAAGACGGT GGTGAACGGG
GCACAGGTTG GTTTTTTCTT GACTGTCTCA TTGTATATGT ACTTAATGCA GCGTTGTTTA
GATTGTCCTT GCAACCTGCC ATAGTGCCGG ATCTCGACAG CTTAACAATA TGATCTTCGA
TGTATGTATC ATCGATGAAG CAACACAAGC TGTTGAGGCT GTTTGTTGGG TTCCCATCTT
GAAATCCAAG AAGTTAATTC TTGCTGGTGA CCCTCAACAG GTAAGTACTT ATCTCATAAT
CTACAAGAAA TAGGGCCTAA TATAACTCGA AATCAAGCTT CCCCCGACTA TCATGAGCAA
AGAAAATGCC CCGCCCTTGA AAGACCTTCA AGAAGCAATC GATCAGATTA AACTAGGTGA
TAGCCCATCC CTGAAATCTC CACGAACTCT GGAAACAACC CTTTTCGAAC GTCTAGAAAA
ACTTTACGGT CCCGGGATCA AGCGTGTTCT TCAGGTCCAG TATAGGATGA ACGAACACAT
TGCAGTGTTC CCATCAGAAA CCCTATATGA GTCGGCGCTC ATATCCGATG CTTCAGTTGC
TAAGCGTACG TTGCTTGAGC TTCCATCAGT GAAAGACAAG ACAAGTGAAG ACGTCAAGGA
TGATTTGGAG CCTACGGTGG TCTTCTTTGA TACCGCCGAT TGCGAATTTT ACGAGAGAAC
CGAAGGAGAT GGAGAAGCTA CCAAGAGCTC CATTGGGGAA GGCAGTAAGA GTAACGAGAA
TGAGGCAGAA ATTGTGGCCA GGTGGGCGAG GAAGCTGGTA TGTTGTTCTT CCTGATCGAC
AAATGTCAGC TTATCATACA CAACAGATAT CATTGGGAAT ACCCCCCATT GAAATTGGCA
TCGTTACCCC TTACCAAGCT CAAGTCACAC TTATTTCGTC TCTCCTACAC GAAGAGTACC
CTGAGATGAC GATTGGAAGT GTTGACGGAT TGCAAGGCCA AGAACGAGAG GTGAGCTGTG
TTTGATTTAT CTCTTGAGAC AAAGCTGATC GTTTACAGGC CATCATCCTT TCACTGGTTC
GATCAAATCC TTCAGGAGAA GTGGGATTTC TTGGTGAATA CAGGAGATTG AATGTTGCAA
TGACAAGAGC AAAGAGACAA CTGGTCAGTA ATTGTGGCAT GACAGTTGCG GTGTCACACT
ATCGACGAAG CTGACAGAAT TTTAGTGTGT TGTGGGAGAT TCCAAAACCG TCTCGAAAGG
AACCAAATAC CTGAAAAAGT GGATGGATTG GCTTGAGGCA GAAGCGGATG TTAGATGGGC
TGGAGAAGAG ACGGTATAGA AACCATTAAG TGCGTGGATC ACTTGGTGTA ATTTGCCATA
TGAGCGTAAC ATGGACGGTA AGATTCTGAA TGTCCATAAG CTGTGTCACA TCCACGTTAT
ACAGAATGAT TATTATAGAT TACGATGACT TGTATTACAG TACAATTGGT AACAAACATA
ATATGTGACA GGTAAATTCT TCTGTCTTAC AACATTAAAT ATTGGCTAAC TACTAAACTC
CTCAGATTAG ATTATAGA
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| Protein sequence | MTLDILQPKP TPDASVQSFL NRHKQLLELE RKAEEEQTRL LNSKCSPSLL EQRGLALNGL
GVSGISIGLG GKSLIELHRP LAYHTSPALP PHTFRPGDPV RIEAHVATTS GKSKGKKRES
EDEGAVEGVV YRVGPEKVVV AVNESKEIDL PERLRLLKLA NSVTFDRMEK TLAHLERLVL
PSGGTPSPPS FNMPLVQALL GKQLPTWKET IPPQNNIEPL GQLSSDEDMK WFGQHLNDSQ
KESIKFCLKA NEVACIHGPP GTGKTHTLVE LIFQLLSRPA APNTTLPPRI LITTPSNLAL
DNLLIRLHIL AQQPPYSSLL PRNSFLRMGH PTRVHRDLVK ETLDWKAANG DQGELLKDVG
KEMQGHLDAL GKKRGEKGAV KGKERGKKWG EVRELRKEYR QREGKVVKTV VNGAQIVLAT
CHSAGSRQLN NMIFDVCIID EATQAVEAVC WVPILKSKKL ILAGDPQQLP PTIMSKENAP
PLKDLQEAID QIKLGDSPSL KSPRTLETTL FERLEKLYGP GIKRVLQVQY RMNEHIAVFP
SETLYESALI SDASVAKRTL LELPSVKDKT SEDVKDDLEP TVVFFDTADC EFYERTEGDG
EATKSSIGEG SKSNENEAEI VARWARKLIS LGIPPIEIGI VTPYQAQVTL ISSLLHEEYP
EMTIGSVDGL QGQEREAIIL SLVRSNPSGE VGFLGEYRRL NVAMTRAKRQ LCVVGDSKTV
SKGTKYLKKW MDWLEAEADV RWAGEETV
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