Gene CNI00080 details

Gene Information

• Locus tag: CNI00080
• ID: 3259463
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 22009
• End bp: 29138
• Gene Length: 7130 bp
• Protein Length: 1607 aa
• GC content: 47%
• IMG OID: 638258492
• Product: ATP-dependent bile acid transporter, putative
• Protein accession: XP_572761
• Protein GI: 58271210
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.35952
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TACATTTACA TCCTGACTGA TAGACACAAA TACTAGCTAT ACGATCGCCA ATATCCTCTC 
CACCACTCCG ATGGTCTCAC TGCGCTCTGT GTCAAGCCTA TAGCCACTTA GCAGGAGTAG 
ACAAGAGCGT AATAAAACAA CTAACAAGTG TCAAGTGTCA ACCTGCGATC ACGTCTTCCA 
GATCTCCAGC ATCTCGACTT CGTTCCAACA AAGGAGCATA TTATCAGTGA TTGGGCGATT 
TATGACTGTA AAGAACTAGA ACCATTTCAG GTGTTGAAGT AAGGACAAAC AAAGAGCAAA 
AGGATACGAT CTGACAGTCC GCGTGGGCGA AACAAAGGAA CGGTGAGCCT GACGTCCTTC 
ACTATACGCT TATATGCGGA GAGATATATA TTTATTGGTC TGTTATATAT CTTTTAGACC 
CCAATTCGTA TTCCTACAGT TCAATTTCTA TCACAAAGGA GGCTGATTCA TGAGCATGCC 
TTCTTATAAC GCATCGACGT ATGCGTCCGA AACGGAGACG CTCTTACCCC GCTCCCCGCC 
TTCTCCCCGT TTTCCCACTT CTTCAGACCA GTACGCCGAT GATGACCATG ATCTTCCCGT 
CCAAATTGAC AGCTTTCTTC GCAATGTCAA GATATGTAAA TCGGCTCTTG GGGCATCCCT 
GTTAGGCACC TTCGCGATGG AAGTATGGCA CTTGTCTATG TCTGCAGCGG AGGTAGGACA 
TCGAAGGCGT AGTGAAACTC AACAGAAAGC TGTAGAAGCC AGTATGTGGG CGGACATATT 
GGGAACAACA ATCATTGTAA GTGTCTTTGA AATATTCCTA GTATTTGCGT CATTATATCT 
GTTGAGGCAC TCTGATGAGT GTATTCGAAT CTACTAGTGC TTCTTATCGA TCCTCTACCT 
CGCATCACTC TTGAAACCCA TAACCGTCCC CTCTGTTTCC CTTTCCCCAA AAATTCAAAA 
CTCCTCCCTC CACCGTTCCC TCTGTACTAC TACTTTCACC TCCATCCTCT TCCTCCTCAT 
CGCCCACTCT TCTCCGGGTG TAGCCTACAC TGTATGGACC CATCTCTCAT CGCCAAGGTT 
GGACGATCCA ATGGCAGAAG GAGTATACCA CCTCCGTATG GTGGGATTGA TCTTGGTCCT 
CTCAAGCGTG GGATTTATGC GTCGGGGTCC AAAGATGTAC TTCCCTCCAC CGAGATTAGG 
GACAGGATTC GGGTTGAATA GGGAGCCCGA ATGGGAGAGT AAGAAGAAGA ATGGACATGA 
CATTGGTGAA TATGGGGAAG ATGGATATCA AAATGGTGAT GAGGACAGGA GAAAGGGGGT 
GGTTATCAAA TTGACGCCTG CACAAGAGAT TGATGATCCC CTGACCTCCG CAGCGTCGGC 
CATTACCATC GAACGGCAAC GACTACCCCC CAAAGTTCCT GAAGAGCCAA AATCTAATGT 
ATTCGATTAC AACAACTCTT CAATGATTAA CTTTGTCCTC CTTACCTATG TAAGTTCTTC 
CCTATCGTCT GTTTTTATGT TCAGATTAAA CTAAGCCCTT CGCTGACGGA GCGATCTCGG 
CAGATTGCTC CCCTCGCCAT CCGTTCTGCA CATGTAGCAA GTCTTCATCA ATCCGATCTT 
CCTATTCTTG AAGATGAGAC GAGAAATAGT GGGGTGTACG AGACAGCGTT TGCATCCAAC 
TCTGCTTCGC ACACGAAGAT AATTGGATTG AAACGGATGG TGGGATCAAA AACGACCACG 
AGCTGGCAAC TCGTCAAAAC ACTTTGGGCC GGCAGGGGTT GGACTGTGTT CATCTGTATG 
TTCTCCCTTT CCCCTCTTTA CTTTTCCTGT TTCCGCTAGC AAACAATCGC TGATATCTTT 
CTTTGAACCG CATCACAGCT TTTGTACTCG AAACTACCCG CAATCTCATT AGCTTCATCC 
AAATCGCCGC CTTACACGAA ATCATCCAGT CATTCAATCA ATCTCCAGGA GAGGACAAGA 
GCTATGCGTA CTTGATGTGT TGGGCAATGT TCTTCGGCCA GACGGTAGAG GTCTTGTTGG 
CAGCTTACTG TTGGTTAGTT CTTTTTTTCA GTTTCTTGCC TTCAGGTTGA TGAGGTCCGA 
TGGGGCTGAC AGAGGTGACA GTGTACGAGA GAATTATATG CTCCATATTC CTGTACGAAT 
GAGCATCAGC TCCATTGTAC GTTCTCCTAT CTCCACTTCA TCCCTTCACT CGCTAACCTA 
TCGTCAACAG ATCCTTGCCA AAATTCTGCG TACAACCGAT GCTAAAGCCC TCGAAGCGCA 
CAACACGATC GATTCTAACT CCGATGACGG GCATGTGCGA AAAGGTACAA AAGAGAAGAA 
GACAAGCGGA GCGCAAGGAC GAAGTCAGGT GATGAACCTG CTCACGATTG ATACGAACAC 
TGTCGCTTCG CTGGCTACGC ATACATGGGG CTTTACCAAC GGTATCACTA CATGTACGTA 
CGATGCTCTT TATCTCTCTG GGCCCGTCCA TCCCTCTCTT CCAGTTCTTT TCTCTTCTTC 
TTTCCTCCAT TTGTCCATCT ATGCTGCCTA TCCGTCTATC TCGATCCCGA TAGAAGAGCT 
AACGGTACAA TGTTAGTAAT TATCGGAGCC GGTATGTTGT ATGGAATGTT GGGTGTCAGC 
GCCTTTGTGG GTATAGCGTG CGTACCGCTC AGTACGCCTC TAACGTGGCT AGTCGCCAAG 
CTGATCTATC GTAAGTCCTT CCCTACCTTC TGTCCGAATC AAATCAGATC ATGGCGAAGA 
ACGGATGTGA TGCTGATAAG GGGGTCATTC AGGTTGTGAT ATTGAGTGGG CCAGGGCTCG 
GGATGCTAGG ACAGGGGCTT TGAAAGAGTT TTTACTAGGC ATCAAGGTCA TCAAGGTAGT 
GTTCTTCTCA CTAATGCTCC ATCACCCAGC CTTTTCCTGG AAACTGACGA AAATAGTTGA 
ATGCCTTTGA ACCTTATTTT ATGCATCGGA TCTCGAAGCT ACGGGCTCAC GAAGTCAAGT 
ACGTCGGCTC CCTCTTTGCC TACGCTCTCT CGCGCCGAAT TCACTAATGG CGCTGTCGTT 
CTGCAGATGG CAGCGATGGC GCTTCACTCT CGGCACAGCA TTCAACGTCC TAGCGGACCA 
ACTCCCCATT CTCTCCATCC TCATCACCTT TGCATTCCAT ACTAAGATCA TGGGGCGCCC 
GCTTGATGCA CCTACCGCTT TCGTAGCACT TAACATGTAT GTTGACGTCT GTTTGCATTC 
TAGAAAGAAT TTTTTTTTTA AATTTAGAGA GAGAAGCAGC TAATCTATTT GTCCAATATT 
AGCTTCAATC GCGTCAAAGA CGGCCTCCAA ACATTCCCCC AGATCATCCA AACATTTCTC 
TCGTGCAAAG TATCCCTCGA CCGTCTATCA CGCTATCTTT CGCAACCGGA GATTGATGAT 
GACCGCTGGG AAAGCATTTC AAGGAGAATT ATCTGCCGAG ATGCCACGAT TACTTGGCCT 
ATAGGGGAAG GTATTGATAA GGGAGATACA GGAAGGTTCA AGCTTGAAGG CCTGGATCTG 
AAGGTACCGG AAGGAAGGTT GAGTTTACTT TGTGGACCGC TTGGTTCGGG AAAGACTTTG 
TTGGTGAATT TGACATTCTG TTACTGTCCA GTTATCGTTT GAAGCTGATC AATTACCTTC 
CAATCTCAGC TCCGAGCTTT CTTGGGTGAG GCGAAGGTCG AAAAGGGCTC CGTCCTTGCG 
CCCAAAAGTC TTCCCGATGC TACTCCCATC CTTCTTGACA ATGAGATTGA AGCAGCCGTT 
CACTGGACGG CTCAACACTG GCTCAATGAC TCCATAGCGT ATGCCCCTCA ACAGAGTTTC 
ATCCGACATG GTACTCTTCG CGATAATATT CTTTTTGGAC AGCCGATGTG GAGAGAGAGG 
TATCAGGAAG TGCTGAGACA GGCTGCGCTT TTGCAGGATC TAGAGATCTT GGAGGATGGT 
GACATGACAG AAGTGGGAGA GAACGGGGTG ACGCTGGTAC GCCCGGTTGT CTCCACATCC 
TTTCCTCTTT AATAGCTTAC TTGGGCATAG AGTGGTGGTC AGAAAGCAAG AGTCAACCTT 
GCGCGCTGCA TCTACTCCCG CGCTTCAACC ATCTACCTTG ACGACATTCT CTCCGCTGTT 
GACGCCCATA CTGCCCAATT CATCTATCAA GAATGTCTTC AAGGTAGTCT GCTCAAGAAC 
CGAACAGTTG TTCTCGTCAC CCACCATGTG CGCCTGGTTT TGCCCGCCGT CAGCTACGTC 
ATTTCTCTCA ATACGGAAGG ACGAATCGAT CAAGCGTGTT CTCCTTCTCA AATCGATCTT 
AACACCTTAT CGGAATCTGC CCCAAAGTCT CCCATCAATA GTGAAGACAT AACGCCGGCT 
GCTCAACTCG AGAAAAAGCG GCTCATCAAC GTCGGCGCCC TCGACGCTAA AACTACGCGT 
AAACTATACC AAGAAGAGCA AAGAGCTGTT GGTCGGGTCT CCGGTAGCCA TTACTTCCTC 
ATTTTCCGTG CAGCGGGCGG AATGTGGTAC TGGCTCATTC TTGCCATACT ATACGGTGGT 
CATCGAGCTC TTACGATGTT AAGGATCTTC TGGCTCGAAC ATTGGTCAGC CAACCCTAGC 
CCTGAACACC TCAATTACAA CCTTATTGTT TACGCAGCCA TCGTCAGCTT TGGGATCGTG 
ACAGGCGCTT TCAGGTGGAT ATGGCTTTAT GGGATTAGTA ACGTTGGGTT CTACTCAAGA 
GGCAATAGAC GTGTACATGA CCTGATCATG GCAAGATTAT TCTCTGCCCC GCTGCAATTT 
TTTGAGAAAA CCCCACAAGG GAGGCTGCTG AATGTTTTTG GCCAAGATAT GTGGAGACTT 
GATTGTAATG TGGCGGACGA TTTTGGAAGT GAGTTGAGTC CTGCTCCCTG GTTAACTGGC 
GCTAACAAAC AACCCCTTCT AAAGGAACAA TCATGGCTAG TGAGTCTAAC ACGACTATCG 
CGAGAAACAA GTGCTCATCA TGCGCCAGGT CTTGCGATTG TAACCTCTGC GGCTGTTGTC 
TTTTTCAAGG AACCCGTGGG TCTTTTCTTT TTGTGGGCGT CGGAGGCATG TACTGACCTT 
TCTGATGGCA GCTTGTCACC ATTATCGCTG TTGCATTTGG GATACCTTTA TTCTGGTTCA 
GTGGACAGTA AGTCGCCTTC TCAGGCAGCT TTACAAAATC ATATCGATAT TGAGGTCTCT 
GCTAGTCTCA ACAAATTGCG ATCAGATATA CGCCGACTTA CAGCTACTGC AAGTTCACCA 
CTCTACTCAC TTTACAATGA AGCCATCGAT GGGATTGTTA TGATTAGAGC ATTTGGCCAG 
GATAAACTCA TGATGGCGAC AATGAAGGTG CTAAACAATC GGGAGCGGAC AACTTACCTG 
GCGGACTGGA CCGGTAAGTC AAGTTCTTTT GAATTCCTTA CTGTTTCAAA AGCTAATGAG 
TCATAGTATA CAACTGGGTC TCAGCTTTCA TTCGAATTCT CACTAATGTG GTCATTACTG 
CCACTTCCTT TGTCTTGATT GAGAGAAATA TTTCCCCCTC GCAAGCTGGT CTCATTTTGA 
ATTTTGCTTT GACAGTTTCC GGTAGTACGT GAAGATCATT CTTTTCGACC GACTTGAAGC 
TAACTTTTTC GTGAAAGGTC TTTTTGGTTT GATGGAGCAG TACAGTCACC TCGAACAGAC 
ATTTGTCAGT GCAGAACGTA TAAACCAATG TATGTTTACT TCGACCCTTC CTCCGCTGAT 
AGGTAACTGA CTCGAGTTGC TCCAGATATC ACTATGTCGG AACATGAGTC TGAAGAGGGA 
GTATGTCCGC CTCCTGAATG GCCTCAACAA GGAAGGATAG ATGTGAGAAA ACTGAGTGTG 
AGATACGCTC CGGACCTTCC GCAAGTGTTG AAAAACGTTT CCTTCACGGT CGAGGTATGT 
TAGTATCTCT CAAAAGCGAA CATATTGCAA CACTGACACG CTAGACAGCC TGGTATGCAT 
GTCGGTCTGG TAGGAGCTAC CGGTTCTGGT AAATCTACTT TGGCTTTGAG TCTGTTCCGC 
GCTATCGAGT ATATGCAAGG AGAGATCATG ATTGATGGTG TCGGTGAGTA CCTTGATGCG 
AATGGCCTCG GTACTTGCTC ATGATTATCC TAGACGTCTC GAGTCTCATC CTTTCCGAAT 
TGCGAGGTCG ATTGAATATG GTGGCGCAAG ATGGAATGTT GTGCTCTGGT ACTCTCAGAG 
AAGCGCTAGA TGTTACGGGA GGAAGAAGTG CGCACGTTTT TCAGTTTCTG ATCTTTCCGC 
TTACAATTAC TCAGGCGATC AAGATATATT CGACGCTCTT CGCAAAGTGC ATCTCATCTC 
TAATGAAATG TCACAAGAAG AGTTAGATGA GAACCCATTT GCGAATCTGG AAACATATGT 
GGCTATCGGT GAGCAAATAC AAGTCAACAA GCTCTGTATC TTTGCTGAAC TGACTTCACT 
TGTTACAGAA GGAACGAACT TCAGTCAGGG ACAGCGCCAA CTTCTCTGCT TAGCGCGAGC 
GTTGCTCAAG CAGTCGAAGA TCTTGGTTAT GGATGAAGGT GAGTCCGGTT TCTTACATTG 
TCCGAGGATC AATCACTAAG ACAAACTGTA GCGACATCGT CCGTTGACTT TGAGTAAGCA 
CGGCTCGATA TCGTTGTCTC ATTAGTGCAA TTATGCTAAT TTGCGTCGTC CCAGGACGGA 
TTCTAAGATC ACTGCAATGA TCAAGGAATG TTTTAGGGGC ACTACAATGC TTGTCATCGC 
TCATCGTCTG GCGACGATTA TGCAGTAGTA AGTATTGAGA GGCAACATAT TGACAGCTGA 
CTGACTTCTG TCGTTTAGCG ATATGGTACT GGTATTGGAT CAGGGTCAAA TTATAGAGTC 
TGGTGGGTCC CAAGAGGGTC GCGGGCCGTC CTTAGTATCT TATATACTGA TTTCCAATAC 
AGGTAAACCT CAAGAGCTCA TACATAACAA TCAGTCTGTG TTCTATGGCC TCTGCATGGC 
ACAAGGTAAA GAAGAATATG CGACCTTGTG TAAGATAGCT GCGATTACTG CATAGATTGT 
AGAACCATAG ATTTTGTTAT TATCATACGT ATCTAGACCA TTACAAGCGG 

 

Protein sequence

MSMPSYNAST YASETETLLP RSPPSPRFPT SSDQYADDDH DLPVQIDSFL RNVKICKSAL 
GASLLGTFAM EVWHLSMSAA EVGHRRRSET QQKAVEASMW ADILGTTIIC FLSILYLASL 
LKPITVPSVS LSPKIQNSSL HRSLCTTTFT SILFLLIAHS SPGVAYTVWT HLSSPRLDDP 
MAEGVYHLRM VGLILVLSSV GFMRRGPKMY FPPPRLGTGF GLNREPEWES KKKNGHDIGE 
YGEDGYQNGD EDRRKGVVIK LTPAQEIDDP LTSAASAITI ERQRLPPKVP EEPKSNVFDY 
NNSSMINFVL LTYIKLSPSL TERSRQIAPL AIRSAHVASL HQSDLPILED ETRNSGVYET 
AFASNSASHT KIIGLKRMVG SKTTTSWQLV KTLWAGRGWT VFISFVLETT RNLISFIQIA 
ALHEIIQSFN QSPGEDKSYA YLMCWAMFFG QTVEVLLAAY CCVRENYMLH IPVRMSISSI 
ILAKILRTTD AKALEAHNTI DSNSDDGHVR KGTKEKKTSG AQGRSQVMNL LTIDTNTVAS 
LATHTWGFTN GITTLIIGAG MLYGMLGVSA FVGIACVPLS TPLTWLVAKL IYRCDIEWAR 
ARDARTGALK EFLLGIKVIK LNAFEPYFMH RISKLRAHEV KWQRWRFTLG TAFNVLADQL 
PILSILITFA FHTKIMGRPL DAPTAFVALN MYVDVYGLQT FPQIIQTFLS CKVSLDRLSR 
YLSQPEIDDD RWESISRRII CRDATITWPI GEGIDKGDTG RFKLEGLDLK VPEGRLSLLC 
GPLGSGKTLL LRAFLGEAKV EKGSVLAPKS LPDATPILLD NEIEAAVHWT AQHWLNDSIA 
YAPQQSFIRH GTLRDNILFG QPMWRERYQE VLRQAALLQD LEILEDGDMT EVGENGVTLS 
GGQKARVNLA RCIYSRASTI YLDDILSAVD AHTAQFIYQE CLQGSLLKNR TVVLVTHHVR 
LVLPAVSYVI SLNTEGRIDQ ACSPSQIDLN TLSESAPKSP INSEDITPAA QLEKKRLINV 
GALDAKTTRK LYQEEQRAVG RVSGSHYFLI FRAAGGMWYW LILAILYGGH RALTMLRIFW 
LEHWSANPSP EHLNYNLIVY AAIVSFGIVT GAFRWIWLYG ISNVGFYSRG NRRVHDLIMA 
RLFSAPLQFF EKTPQGRLLN VFGQDMWRLD CNVADDFGSL AIVTSAAVVF FKEPLVTIIA 
VAFGIPLFWF SGHSPLYSLY NEAIDGIVMI RAFGQDKLMM ATMKVLNNRE RTTYLADWTA 
FIRILTNVVI TATSFVLIER NISPSQAGLI LNFALTVSGS LFGLMEQYSH LEQTFVSAER 
INQYITMSEH ESEEGVCPPP EWPQQGRIDV RKLSVRYAPD LPQVLKNVSF TVEPGMHVGL 
VGATGSGKST LALSLFRAIE YMQGEIMIDG VDVSSLILSE LRGRLNMVAQ DGMLCSGTLR 
EALDVTGGRS DQDIFDALRK VHLISNEMSQ EELDENPFAN LETYVAIEGT NFSQGQRQLL 
CLARALLKQS KILVMDEATS SVDFETDSKI TAMIKECFRG TTMLVIAHRL ATIMQYDMVL 
VLDQGQIIES GKPQELIHNN QSVFYGLCMA QGKEEYATLC KIAAITA