Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03660 |
Symbol | |
ID | 3259116 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | + |
Start bp | 60295 |
End bp | 62694 |
Gene Length | 2400 bp |
Protein Length | 606 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258117 |
Product | alpha-amylase AmyA, putative |
Protein accession | XP_572528 |
Protein GI | 58270744 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGCCTCTATC TTTGCTCCAT CATCCTGCCA CTCTTTTTCA ATCCACACTC ATTTATTCAC AAGAGGTGCA CAATGCCTGT CCTTTCAAAA CTTATCTCAC TCCTCCCACT CCTCGCCATC GCTCAGGGAG CTACCAGCGA CGAATGGCGA TCAAGATCTA TCTATCAGTG AGCACGTCGC TCTCCAGCAA GGCCCGTATT AACCCTCGAG CAGACTTATT ACTGACCGTT TCGCACCTCC TTCTGACGAC ACAACATGTC CGTTAGGCGC TACTAACTAC TGCGGTGGTA CATGGCAAAC CATCATCTCG AAGCTAGACT ATATCCAGAA TATGGGATTT GATGCCATCT GGATCAGTCC TACCGCTCTC AACATTGAAG GTAATACTAA GTATGGCGAA GCTTACCACG TAAGTATCCG ACAAGTTTCA ATACTTGCGT CCCCCAGCAA GCAGTAATGA CATTCAGCTG TAGGGATACT GGACAGCAGA CCCGACTAAA CTCAACCCCC ATTTCGGCCA AGCTTCCGAT CTCAAAGCCC TCTCGGTTGC GGTCCACGAC CGAGGAATGT ACCTCATGGT CGACATTGCT ATTAACGCTC TTGCAGCCAC TTCCTACTCT CTCGATGCCT CTGCACTCGC TTCAGATGCC GATGGTACCC TTCTCTTCAA GGACCCTTCC GATTTCCACA CACGATGTGA TATCAGCTGG GGAAACCACA CTTCCGAGCA AGTCTGCTGG CTTGTGACAG GAGATGACAA CGGGGATGTG GCGCTGCTTG ATCTCAAAAC TGAAAGCGAC TCTGTCGCTA GCGTACTCAA GGACTGGGTT GGTGGGTATG TCACCGAGTA CGGGATAGAT GGTTTCAGAA TTGATGCGAG CAAGCATATG AGCAAAGAAT TCCAGCACGA TTTCTGCGAG GCCGCCGGCA CGTTCTGCAT GGGTGAAGTC GCAGGTGACA ACACCGAGTA AGTCTTACGA ATGATATCTA GCTTGATACT AAAGCTGACC ACTGGCAGAT ACGCGGGGGA ATACCAAAGT GCTGGTGGCA TTGACTCTGT TTGTGGTTTC GGCCTCATGT ACGGCTTTGT CAACGTTTTC ACCGGTGGCG ACAAAATGTC CACCCTCGAA TACTACATCA ACCTCGCCGC CTCATCCTAT CCTGATCCTA CAGTCATTGG CACATTCCTC GACAACCAAG ATCTTCCTCG ATTCAATTCT CTTACATCTG ACGCTTCACT CGTTTACAAC GCTATTGTCG GTATGTTCAT GTACGGCGGT ATGCCGATTG TGTATTACGG TTTGGAGCAA GACATCTCCG ATGGTCCTAC GGACCCTCAG AATCGGGAGG CGCTTTGGAA TTACAATAAT TATGCCACTG ATGGGGTTAC CTTTGGGAGG ATCACAAACC TCAATAACAT TAGGAATAGG TTGGGCGGTG TTGGTGAGCT GTATAATGCT GTTGCTACAG TTCTTGCCAT TCAGGATCAG GACATTGCCC TTCAGCGAGA AGAGGCTTTG ATTGTCTTGA CTAATGTGAG TGATTATTTG TGTACCTTTC CCTATTACTT TGTTGATGAT CCATGTTAGC GGGGCCAGTC TGGTACCGGC ACTTGGGCTA TCAAAAACAC CCAATTTGGC GGCTCTGTCT CTGTCATCGA GTAAGCCTAT TTCCGCTCTT TGTGTTCATA TACATTGCTC ACCAACTATT AGTCTTCTTT CGTGCTCTAC TTCTACTACT GACAGCGATG GTTCTCTTAC CGTCACATGG ACTTCCGGCC AGCCTTTCGT AAGACGGCTT CTTCTTCTCT GCTCAACGAC ATTTCGATGA TAGCTAATGG TTTGTGCAGG TATTTGTCGC CTCTGATGTT GCCGATAAGG CCGGATTATG TGGCTCTTTA TCCAACAGCA CTAACGCTAC TACTGTCTCC TCATCTTCCT CTGCTTCCAC CTCTATCGAC ACTGCCACCA GTAGTGCCAG TATAAGTGGC AACCTCGCCG TCATCACTGA TGGCTCCTCC TCTCCCTCTT TCTCTGCAAC AAGCTCAGCC CTCTCTTCAA GCATTAGCTG GTACACCCCC ACCAGTGCTG CCAGTTCCGT CTCGAGTTCC GAGTTGGTAG TCGTCGTTGC TGCCGTGTCA ACTGCAAGCA CTGCTGTGAC TTCTAGCGGA AGCATTTGTC GCAGGTCAAA GAAGAGGGCT ATGAGCAAGA GGCAATTGTA AGGCTTTCAA TTCGGGAGGC TGTTGGGTCA GAGTGTAATA GTGATGGGAG GTGATCAAGA GGATTATGGA CACAAGGCCT GCCTATGGAA CGAACGATCA TAATTATCAG CCTTTCAATC ATAATTATCA ACTATTAATT TATTGTGAGG ACGATCTATA AATCACGGAC ATATGAATCA
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Protein sequence | MPVLSKLISL LPLLAIAQGA TSDEWRSRSI YQLITDRFAP PSDDTTCPLG ATNYCGGTWQ TIISKLDYIQ NMGFDAIWIS PTALNIEGNT KYGEAYHGYW TADPTKLNPH FGQASDLKAL SVAVHDRGMY LMVDIAINAL AATSYSLDAS ALASDADGTL LFKDPSDFHT RCDISWGNHT SEQVCWLVTG DDNGDVALLD LKTESDSVAS VLKDWVGGYV TEYGIDGFRI DASKHMSKEF QHDFCEAAGT FCMGEVAGDN TEYAGEYQSA GGIDSVCGFG LMYGFVNVFT GGDKMSTLEY YINLAASSYP DPTVIGTFLD NQDLPRFNSL TSDASLVYNA IVGMFMYGGM PIVYYGLEQD ISDGPTDPQN REALWNYNNY ATDGVTFGRI TNLNNIRNRL GGVGELYNAV ATVLAIQDQD IALQREEALI VLTNRGQSGT GTWAIKNTQF GGSVSVIDLL SCSTSTTDSD GSLTVTWTSG QPFVFVASDV ADKAGLCGSL SNSTNATTVS SSSSASTSID TATSSASISG NLAVITDGSS SPSFSATSSA LSSSISWYTP TSAASSVSSS ELVVVVAAVS TASTAVTSSG SICRRSKKRA MSKRQL
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