Gene CNH03610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH03610 
Symbol 
ID3259118 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand+ 
Start bp69604 
End bp70721 
Gene Length1118 bp 
Protein Length256 aa 
Translation table 
GC content48% 
IMG OID638258122 
Productproteasome subunit alpha type 3, putative 
Protein accessionXP_572523 
Protein GI58270734 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.661994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCACAATGAC CTCAATAGGA ACAGGATACG ATCTCTCAGT CTCCACTTAC TCTCCGGATG 
GAAGGCTTTT CCAGGTGAGT CTCAGACGCG GACAAGGAAA CAAAGAACGG TGTTGCTTAT 
CTCCTGCTCT TAGGTTGAGT ATGCCAACAA GGCTGTCGAG GCCGCCGGGT AAGCACCGCT 
CATCTTTTCC AGATGTTTCA GGACTGATAT AGAGATATTT GACAGCGTCG CTATTGGTCT 
TCGGTGCAAA GACGGTGTCC TCCTCGGTGT TGAGCGCATC CTTCATTCCA AACTTCTTGT 
CAAAGGCGCG AACCGCCGAA TCGCATCCCT TGACGAACAT ATCGGCATGG CGGGCGCGGG 
TTTGTTAGCT GATGGGAAAC ATCTCGCGAG TAGAGGAAGG GATGAAGCGA GCAACTTTAG 
GGATACCTAT AATACACCTG TTACTGTTCA GGTACGTCTC TTTCAGTCTG TTTTGAATCA 
TGAATAAGTG GTCGGGTTAA GGAGATCAAA ACACTAACTG GACGCGTGTA ATTCTAGATT 
CTCTCTGACC GGCTTTCCGC ATATCTCCAA GCATACACAT CTTACGGTTC TGTCCGACCT 
TTTGGTCTCT CTGCCCTTGT TGGTGGTGTT GACAAGACCG GTCCTAAACT CTTCTGCGTT 
GAGCCTTCGG GAGTGTATTA CGGTTACCGG GCATGTGCAG TTGGAAAGGG CAAAGCATTG 
GCGAAGACTG AGCTTGAGAA GGTCGTGAAC AAGGAAGTGG AGACTGGCGA GGCGATCACT 
GTGCGAGAAG GTGTTATGGA GCTTGCTAGA ATGTAAGTCA TGATCTATTC ACACCCAAAG 
ATATTTTCCG GTTGGAGGAT TACTGATGAG GTGATATAGT ATATACTTGG TCCACGACGA 
AAACAAGGAC AAGGACTTTG AGCTTGAGAT GACTTGGATT TGTGAAGAAT CTGGCAACAA 
GCACGCGCTG GTGCCGGAGG ATCTGCTGGC AGAGGCAGAG GCGAAGGCAA AGGCAGCTTT 
GGAAGAAGGC ATGGAAGAGG ATTAGATATA CTCGTTGGAG TAGACAGGAT TGTAGGTAGA 
TCGGTGACAT ATGTATATAT CGAATATAGC CGTTCTGC
 
Protein sequence
MTSIGTGYDL SVSTYSPDGR LFQVEYANKA VEAAGVAIGL RCKDGVLLGV ERILHSKLLV 
KGANRRIASL DEHIGMAGAG LLADGKHLAS RGRDEASNFR DTYNTPVTVQ ILSDRLSAYL 
QAYTSYGSVR PFGLSALVGG VDKTGPKLFC VEPSGVYYGY RACAVGKGKA LAKTELEKVV 
NKEVETGEAI TVREGVMELA RIIYLVHDEN KDKDFELEMT WICEESGNKH ALVPEDLLAE 
AEAKAKAALE EGMEED