| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02990 |
|---|
| Symbol | |
|---|
| ID | 3259102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | - |
|---|
| Start bp | 275048 |
|---|
| End bp | 277761 |
|---|
| Gene Length | 2714 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638258186 |
|---|
| Product | sugar transporter, putative |
|---|
| Protein accession | XP_572469 |
|---|
| Protein GI | 58270626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCCTTCCT GGCCACTCGT CCTTCCTACC TCCGTTACCT TGAGCACCAC CATCACCATG
ATGTCGACGG TTGACTATAA GCCCGACAGC ATACACGTCG AGAAGACCTC TCTTCCTCCT
TCCTCTTCCT ACCATGAGAA CGACACCAAG GCCGCTGATG CGTCTCATAT TGAGGACATG
GGCGACAAGA GCCACCATAC GCCAGCGGTC AATATCATTC AAAACCCTTT GAGAGTGAGT
CTTCTGTTCA TTCTTTTGCA ATTTGGCAGG GAGAATGTCG TGGTCATTGT TTCTGGCGAC
ATCTTGAGTT GGAGAGCATC AGATTCCGTC GACTATCATA CATAAGCATC ATTGCTAACC
TTTCTTTAGC GCTTCGCACC TGAAAAGGTT GTCGAGGATG CCAAGCTTTT CGCCAACGGT
CACAATCTTG CTGAATATAG CGATCTTTTT GGCCGGGCTG CCCTTGTTGC TCGAGAAGGC
AAGCACTTCG ACACCATCAG TGTGCTCACT CCAGAGGAAA AAACTGCTCT TGAGTACGAA
AGAGATCACA AATGGCACGG TCCTCGGATG CTCTGGTACT CTATCGCTCT TTGTGCTATC
GGTGCTGCCA CACAAGGTAC GTCTCACTCT CCTTGATCTC ATCTAGCGTG GCTAATCCAG
AACAGGTTGG GATCAAACTG GTTCTAACGG TGCGAACTTG TCTTTCCCAG AAGAATTCGG
TATTGCGGGT GAAGGCCGAG ACGAATGGAT CGTCGGTGCT GTCAATTCAA TCATCTTCTT
AACTGCCGGC TGCATTGGTG CATTCATTGT CGACCCTCTT AACCACTACC TCGGTCGTCG
AGGTGAAATT TTCCTCACCG CCTGTTGTCT TACCGCCACC CCGATCGCTT CCGCATTCAC
TCACTCTTGG CAAGCTCTCT TTGCTGTTCG TTTCGTCATG GGCATTGGTA TCGGCGCGAA
GAACGCTACT GTCCCCATCT TCTCTGCTGA GATTGCTCCC GCTAGGGTTC GAGGTGCTTT
GGTGATGTTC TGGCAGCTTT GGGTCGTTGC TGGTGAGTCA TTCAGTCAAT CGAATCGGTC
CACTCAACGT GTGCTAATGA TGAATAGGTA TCTTCCTTGG TTTCGCTGCC AATGTTATCG
TCAAGAATAC CGGCCAGATC GCCTGGCGTC TTCAACTCGC CTCCGCTTTC ATTCCCGCCT
TCATCCTCAT GCTCGGTATC TGGTTCACCC CTGAATCTCC TCGTTGGCTC ATGAAGCACG
GAAAGTACGA CAAGGCATTC CACTCTTTCC TGCGTCTGCG AGCCCACCCC ATTATTGCGG
CAAGGGACTA CTACTACTCT CACGTTATCT ACCAAGAAGA GCTCTCCTTG GCTAAAGGGT
CCAACTACTT TTCTAGGTTG TGGGATTGTT TCAGGGTGCC TAGAATCAGG AGGGCGAACT
ATGGTGCTTC TACTGTTATG CTCGCTCAGC AGATGTGCGG TATCAACAGT AAGTTTTCTC
CATTTCTCCC CTGGCTTTAA CTGACAATGC TTGTAGTCAT CTCATTCTAC AGTTCAACCA
TTTTCACGGA CGTCGGTTAT ACTGATACCC AGGCTCTTTA TGCCTCTCTG GGTTACGGTG
CCGTCCAAGT TGTGTTCACC ATCCCTACAT TGTTCATGAT CGATACCGTT GGTCGAAGGA
GGTTGTGTTT AATTGTAGGC AACATTTTTA ACCTCTTGTC TCACAAAGGC TAACTATTGA
ATAGACTTTC CCCCTCATGT GCATTTTCCT TCTCGCCGCC GGTCTCTCTC TTCTCAAAGA
CAGCGGCAGC CGTGGCTCTC AAATCGGTCC CGTTGTACTC TTTGTCTACC TCTTCACCAT
CGCCTATTCT CTCGGTGAAG GACCCGTCGC TTTCCAGTAC TCTGCAGAAG TCTTCCCTAC
TATTCAGCGA GAACAGGGTA TGGCTTGGGT GGTGTTCATT AACAACTTCT TTGGTATGTC
TTCGCTGTCC CCCCTGCACA TAATCCAAGC TGACATTTCC ATCTTTCTAT ATAGCCGGTG
TCCTTAGTAT AACCTTCCCC CGTATGCGAA CCGTCATGAC ATCTACCGGT GCTTTCGGTT
TCTACGCGGG TCTCAATTTG ATTGCATGGG GAATGATTTT CTTCTTCGTT AGGGAGACCA
AGCAGTTGAC TCTGGAGGAA ATCGATCGTA CGTCTTCTCC TAGCTCCTTC ACTTTTTGAC
GGCAAGGCGC TAACCCTTCT TACAGAGGTC TTCTCCGTCC CAACGGCGCA ATTCGTATCT
TACGAAACCC GAGTCCGCGT CCCCTGGTTC TTCAAGCGAT ACCTTTTCTT CCAGAAGCAC
ATCCCCACCC CACCACCTAT GATTGGCGGC GCCGATGATG AGGATGACTA CAAAAATGAG
AAGGGGGCGA CGGCTTGAAT GGGGGGCGTA GAGGATAGAT TTTAATATTA ATTAGCGTCT
CATATTGTCT TGTGTGGGTT TTTAGGTTAG TGAACAGTAG CTTATCGGTT GGGAGAGGGT
TGATAATCTG GGTATTGGGA GCATTATCAA CAGGTTTTGG CATGTATCAT CCGTTGTCCA
TCTGTTCATC GCTTGTCTTT CGTTTGGTTC ACAAGTTTCT CCTCACCTTA ACCTTTCTTG
TAAAGCTAAT TATTACAAGA ATTCGAAAAG TGTGCGAGTG ACGATTAAAC AAAGATCGAA
GAAAAAGAGT CTAG
|
|---|
| Protein sequence | MMSTVDYKPD SIHVEKTSLP PSSSYHENDT KAADASHIED MGDKSHHTPA VNIIQNPLRR
FAPEKVVEDA KLFANGHNLA EYSDLFGRAA LVAREGKHFD TISVLTPEEK TALEYERDHK
WHGPRMLWYS IALCAIGAAT QGWDQTGSNG ANLSFPEEFG IAGEGRDEWI VGAVNSIIFL
TAGCIGAFIV DPLNHYLGRR GEIFLTACCL TATPIASAFT HSWQALFAVR FVMGIGIGAK
NATVPIFSAE IAPARVRGAL VMFWQLWVVA GIFLGFAANV IVKNTGQIAW RLQLASAFIP
AFILMLGIWF TPESPRWLMK HGKYDKAFHS FLRLRAHPII AARDYYYSHV IYQEELSLAK
GSNYFSRLWD CFRVPRIRRA NYGASTVMLA QQMCGINIIS FYSSTIFTDV GYTDTQALYA
SLGYGAVQVV FTIPTLFMID TVGRRRLCLI TFPLMCIFLL AAGLSLLKDS GSRGSQIGPV
VLFVYLFTIA YSLGEGPVAF QYSAEVFPTI QREQGMAWVV FINNFFAGVL SITFPRMRTV
MTSTGAFGFY AGLNLIAWGM IFFFVRETKQ LTLEEIDQVF SVPTAQFVSY ETRVRVPWFF
KRYLFFQKHI PTPPPMIGGA DDEDDYKNEK GATA
|
|---|
| |