Gene CNH02290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH02290 
Symbol 
ID3259292 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand+ 
Start bp489142 
End bp490352 
Gene Length1211 bp 
Protein Length244 aa 
Translation table 
GC content48% 
IMG OID638258258 
Productcytoplasm protein, putative 
Protein accessionXP_572402 
Protein GI58270492 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR03328] methylthioribulose-1-phosphate dehydratase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCCACTTTG CACAAAAATG GCCAAGACCT ATACCCCCGA AGAGGCCGAG GCCCTTGTCC 
ACAGCCATGA CCCGGAGCAT GTGGGTGACC CTCCTCGTTT CAGTAGTGAT GCCAAAAAGG 
CTGACGAAGA ACAGCCCGCC AACTTGATCT GTGACTTATG CCGAGAGTTC TACAGTGCGC 
CAGTTTCTGC AATAAGAAGC TGAAGGAATT TCATGACTAA CATATATGTA GAGCTTGGAT 
GGGTTACTGG CACAGGTGGA GGTGAGAGCT TTAAACTGAA GTAACAGGCC GGCTTAGCTG 
ACGCGTTAGA CAGGCATCAG TATCCGCAAG GAGTGAGCCG ATTTCATTCA CATGTAAAAG 
CTGCTGAAGC TCACTCATGA TGTTAGCGAT GTTGTGTACC TCGCCCCTTC TGGAGTCCAG 
AAAGAACGAA TCAAGCCCGA GCACATCTTC GTTCTCCCTT TTGCCCAGTC TTCCGTACCT 
AAGCCTGGAT CAAAACGAGA CTTCATCAGA ATACCGAGCA AAAAAGGTCT CAACGAGTCT 
CAATGCACCC CGCTCTTTTG GAACGCCTTC ACCATGCGAG AGGCTGGTGC CTGTATCCAT 
ACTCATTCTC AGCATGCCGG TAAGTTCCCC CCAACTGTAG TAACAATGCC TTATATGCTG 
ACTTTCTACA GTACTTCTGA CCCTCCTTCT TCCTCGCGAT GCTCCTAGCT TCCGAATTTC 
TCACCAAGAG ATGATTAAGG GTGTCCGTTT GGGCGGTGTT GGAAAGACAT TGAAGTTCTT 
CGAAACCCTC GAAGTACCTA TAATTGACAA CACGGCGTTT GAAGAAGATC TGACCGAGGG 
CATGGCTGCT GTGAGTGAAC ATCATGCGTT GAATGATTGA ATCACATTGA CGGAGATCTA 
TCAGGCAATG GCCAGGTACC CAGACGCACC GGCCATTTTG GTCAGACGGC ATGGTGTCTA 
TGTCTGGGGT AAGTTGCATT GACAGATATT CAGTCTGCCT TGATGACTGA TGTGACCCAT 
AGGTAACACC TGGGAGCAAG CCAAGACTCA AGCAGAGTGC TTGGACTACT TGTTTGAGAT 
TGCTTGCAAG ATGATCCAGA ATAAGATTCC TCTTGAAGGT GATACATAGA TGAAGCGTGC 
ACAACTGCTG TCTAAAGCGC ATTTGTTGTA GGGCGAAAAT CGCATATACC ATGCAAATAC 
TACATGTTTA G
 
Protein sequence
MAKTYTPEEA EALVHSHDPE HPANLICDLC REFYKLGWVT GTGGGISIRK DDVVYLAPSG 
VQKERIKPEH IFVLPFAQSS VPKPGSKRDF IRIPSKKGLN ESQCTPLFWN AFTMREAGAC 
IHTHSQHAVL LTLLLPRDAP SFRISHQEMI KGVRLGGVGK TLKFFETLEV PIIDNTAFEE 
DLTEGMAAAM ARYPDAPAIL VRRHGVYVWG NTWEQAKTQA ECLDYLFEIA CKMIQNKIPL 
EGDT