| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH01190 |
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| Symbol | |
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| ID | 3259129 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 838605 |
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| End bp | 843469 |
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| Gene Length | 4865 bp |
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| Protein Length | 1464 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638258364 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_572309 |
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| Protein GI | 58270306 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGCACATCTC CGCCACCGTT GTCTCCCTCC CCCGCTGCAC TGCAAGAAAA GAATGACAGC
ATAGAAGAAC CAACACGGAT CAGGACAACT TCACTTCACC CCCATTCGAC ATTCGTTAAC
ACCTTCATCT TGCAGCCATG TTCACAAAAG CAACGTAAGT ACTCCCAAAC ACAGCTCCCA
GCTCCAGCTA AATTCCCCTA GTTCCCACCT CCGTCCCTTC ATCCGTCTCC CCTCTTCTCA
CTCCCCTGCC TCTCCAGACC ACTTCACCGC CAACCCTTCT CTTTTACACC ATCTCCCTCA
GCATGGCACG AGTAATTCAG TAATTGTTCA GGGACAACAT TCTGCCCAGG CCGGTGGTGC
GTCTGGACAT GCTGGACGGA CAGGCTATGG TGGCGGCGCA GGTGCCGGTG GAGGATATAC
CGTGAGTGGG GAAGTCTGCA AAATGCATGG TGGCAAGAAA AGCTGATCAG ACGGTAGGGT
CACGCGCGAG CTTTCCTCTC TCTCCCTCAA ACAGCTTCTT TCGATCCTTC TTCCACCCTC
TCTGACGAGC GAAAAAAGGA CGCTTCAAGT TCATCCTCTT CAAATACATC TCTACTCCTT
AAACACCGTC TGTCCAAGAC ACCACGAATA GTTCACCTCA ATGATTCTGT TCGGGCGCGA
CGAGCAATTG AAGAACGAAA AGGGGGTAAG GATTTTACGG TCGTTGAACT CGAAGATGTT
CCCAGAATCC ACAGACGAGA TTCTATCGCC GAATATACCT CTGGCCGATT ACCCTTAACG
TCTACTTCAA CCCGATCACT ATCCCGTTCC CATACTTCTT TCGACATTTT CCAGGTCGGT
ATTCCTCAGC CTCGATCAAT AGGTCTTCGT GCTCTTTCGA CAACATCTAA TGCACCTCGA
GCTCTTGAAG CAGAGGATAT CGAGGCGGTT GAAGAATTGG AGTTGATGAC TCCTCGTGCT
GGGCGAGAGG TTAGGACGAT CGGTCAGCCC AATCGAGTGT TGATGGACCT TGCTGGACGA
GATTTGCCCT CAACAGTCAC AGCTGGTTGG CAGTTGGGAG GGATCAGGAG GAATTCCACT
GCTGCAGTTG AGCGGCCATC GCTCGACCTC CCTCCTGCTG ATCTTTCCAG TATTGCGACT
CACGAGCAGA AGGAGGACAA ACAGCGTGAA GAGGCGATTC TCCAAGCACT CCGCCAAGCG
AAACAGAATG GAAATGCCGA ACTCGTGAAA AACCTCATCA CCCATTATCG TTCTCCTCGA
TCGCTTCCAC CTTTCTCTCC AGACAGTCTT CCTGGTGTTC CAGAATTGTC AAAGCATTAC
CCCCTTCCAT CCGGTTATTC TATCAGGATT TACAACGCCT GCCTCATTGC GGCTCTTGCG
ATTCGAAGTC CTGGTCAATC CATCGCGCCA ATCCTCGAAA TTTACAACGA GCTTTTAGAG
AAAGACATGA TCCCTGATAG TATGACCTAC GGCGCAGTAA TCCGAGCTTT GGCTATGAGA
GAGCGAGACG TTAGAGGGAG TCAGGAGATC TGGGAACGCC AAAAGACTTG GGGCTTGTGG
CGGTCCGAAA TTAGTGGAAA TCAGACTTGG GATCCTGAAG TAGCGGCTGA AAACGACGCA
AACATAGAGG CATACCTCGC CGAAAACAAT GTTTTGTCGG CAGTCAGGCT TTTCCGAGCG
GCGGCTTTAA CAGGCCAGGC TGGGCGATTT GTCGTGTCGA TACATGGCAC TGTGTTAGAC
GCTTTGAGCA AACTGGAGAA GCCTGATGTA ACTGTGATGG AACAGTTGGT CGAGCACGCC
GAGTCCCATG AAGTGCCAGG TATAATATCG CTTTACAAGC ACCTTTTCTT GGCCTACGCT
AAAATCAAGG ACGCTTCTGC TCTTAGTCAA GTATGGAACA AGTACCGAGG TCTGGCCAAG
ACCGCAAGTC GAGAAGACTG GGCCGCTGCG TGCGGTCAGC GTGAAGCCTA TGATGTCAGG
ATCGAAGGAG CCATGCGGGA GCCTTGGGAT ATTGTGATAA GTGCTTTCAT TGAAGTTGGG
GAGTTGAGCA AAGCGTTTGA AGTTTTTGGA GAAATGGCAG AGGTCGCAGA AAAGAAAACT
AAGGCTGAGG TGCCGCCTGC CACCCACAGG ACGTGCGGTG TACTTGTAAC TGCCCTTGCT
CGAGCTGGTG AATTCGACCT CGCCTTAGAG TGGTTCAACA GCTTGCAAGC CTCTGCTATT
GTTACTCAGA ACTCGCCCCA TCGACTCACC CTTGAACACA CCATTGTCCT TGCAGAACAG
CTCCTCCTCA AGGGACGTTG GTTTGACGCT GCTGACGTCG TTATTGGGCT TGGGGGGATT
CGTGATGAGT TGGCTCAACC AAGCGCCCAA CACAGCCTGC GCACCGTCGC GTGGAAGACT
AACTTTGCTC TTATTCACCA CGCCGCTCGC TCGACTCCTG AAGAAGCTGC TCGCACGCTC
GCCCGTGCGC AGGAAGTACT TGCTGCCGTT CCCATTCAAC TCGATCTGCG AACTGTCGTC
CTCCACCTTA CACTCCTCGC TCAGGCTAGC GATTATACCA ATATGATTCG CGTCGTTGAT
CTCATCTCTG CCCGAAAGCT TCCTGCCAAC ACCATCCAAA GACTGAATGA TGCTTGCGAC
CAAATCGCTA AGGAAGACAT ACCCTTCAAG TACCGAATCG AGTTGATCAA GGCATTTGGC
CGGCATCACG CTGATTTGAC GCCATTCGTG GCGGAGAAGC TCATCCAGGC ATATATCTCA
GAGAAAAGCA AGCCTGTTGA TGAGCGCGAT CTGAGCAAGG AATCGCTCTA TATTCTTCTC
GATGCCTTCA CTGTCGTTGA ACAAAAGCAA GTAAACGAGG GGGAATATGA TGAGGCGCTT
GAGCAATTGA TGCAGGATCT CGCGGCGACC GACGTCAGTG AGGATATGAA GAATGCGACC
TCAAACCAGG CCATCGGCTA TTTAGTGAAA AACGTGATAT TCAGGTTCGG TGCTGAGCGA
GCTCGATCCA TGTTGGGTGC GGTCTTTGGC GAGCAAGAAG CCACTAACTT GGTCCAACCC
GTTTCTCCCA CTTTTATCCA ATCCGAAACT GTCTCTGGTA GTGAACGTCT TTCCGAAGCC
GCCTCTCCCA GTCAATCTCA TGCCTCCTCG GCTACCTCTG CCCCTGCCCT TTCTTTCTCA
CAAACGCTTA CTTCCTCGAT CGAGCGCTTC ACTTACCGTA ATCCCACCAT CACTCCTCTA
GAAGCTTACG CACTCCTTCG AGACGGTCTT TCCGTCTCCC AAGTCCCTCG ACTCGAAATC
ATTCTTTCCT TGATGGATCA TCTTGCCCGT CGCAACGATG AACCTAAAGT CCGGGAGCTT
TACGAGCTGG CCCAGGTTGT ACTCAACTCT TTGGTCAGAC CAGATGTTCA AGCCCAGAGT
TGGTACTCTG CCGAGAACGC TATGCTCATC GCTTGCTGTC ACCTTGGTTA TCTCGAAGAG
GCCGGTCTCC ATCGAGCTCG TATTGTCCAA GCTGGCTTCA CGCCCAGTGC TGATGCTTAT
GCTACCATGA TTGCCTCTTC AAAAGACACC ACCGATGATG CGCTGGTCGC TAGAGAATTA
TGGGAAGAAG CTCTCGGTAT GGGTGTGAAA CCTCATCTGT TCTTGTACAA CACTGTTATC
AGCAAATTAA GTAAGGCCAG GAAGGCGGAA AGTGCGTTGG ATCTGTTCAT GAGGATGAAG
TCCGAAAGGA TTAGGCCATC CAGTGTTACT TACGGAGCTG TTATCGTAAG TTTTGCCTTT
ATATCTGCAG TTTCTTGAAC TAACAAAGCG TTCAAGAATG CTTGTTGTCG AGTTGGCGAT
GCTTTGTCCG CAGAGACTTT GTTCGAGGAA ATGACTTCCC AGCCCAATTT CCGACCTCGT
GTCCCTCCCT ACAAGTAAGA CATACTTTTT ACGCTTGTTG AGTTTCTGTT GACATCAAAT
CCAGCACTAT GATGCAGTTT TACCTTCAAA CCCAACCCAA CCGAGAACGT TTCCTCTATT
ATTATGGTGC CCTTCAACGC GCTCGCGTCC CTCCTTCTGC CCACACCTAC AAGCTCCTTA
TCGACGCCTA TGCCACTCTC CCTCCTATTG ATATCCCTGC TATGGAGCTC GTATTCGCTC
ATCTTATTGC CGACAAATCT GTACGAGTTC AAGGTACTCA CTGGGCGAGC TTGATCTCCG
CGTACGGTAT TCACGCGGGT GATGCCAAGA GGGCCAAGGA GGTGTTCGAC AAGATTCCAG
AGAAGGGTGG AGACTACGAA GCAGTTGTAT GGGAGGCATG GTTAAATGTG CTCAGTCAGC
AAGGTACTAT CGAGCAATTA GAGGAGGCTC ACACTAGAAT GCTTGAGAGT GGTGTACAAC
CGACGGCTTA CGTTTACAAT GTTCTCATTA ACGGCTATGC CAGAGCTGGT AACATTGGGC
GTGCCCGTGA GGTCTTTGAG TCCATGGGAG ACAGTATCAC TGGTGTCGCC GCTCCCAACA
ACCATCCTGT TCTTCTCACC TCATCTGGCC ACGCCAAGCC GTCAACACAG GCTGCGACGA
CTGGTGTGGT CTACCGAGAA CCGTCAACGT ACGAATCAAT GATTCGAGCG GAGATCACAT
GTGGAGACCA GCAGAGGGCA ACAGAGGTTT TGCAGAGGAT GGAGGAGAGG GGTTACCCAA
TGGCGGTTTA CATGCGGGGC AAGGCAGCAT TGGAAGGAGA GCCTCCAAAG TTTTAGATTA
GATCATTCAC CACTCATATT GGTTCATTCA CTTGCATTTA TACCCAATTT ATAAGATAGC
TGTTGGGAAA GGAGAAGTAT ATAGCTTCAG GAAAGACGTA TTTAATATCC AGGGGATTGA
TGTAC
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| Protein sequence | MFTKATSHLR PFIRLPSSHS PASPDHFTAN PSLLHHLPQH GTSNSVIVQG QHSAQAGGAS
GHAGRTGYGG GAGAGGGYTG HARAFLSLPQ TASFDPSSTL SDERKKDASS SSSSNTSLLL
KHRLSKTPRI VHLNDSVRAR RAIEERKGGK DFTVVELEDV PRIHRRDSIA EYTSGRLPLT
STSTRSLSRS HTSFDIFQVG IPQPRSIGLR ALSTTSNAPR ALEAEDIEAV EELELMTPRA
GREVRTIGQP NRVLMDLAGR DLPSTVTAGW QLGGIRRNST AAVERPSLDL PPADLSSIAT
HEQKEDKQRE EAILQALRQA KQNGNAELVK NLITHYRSPR SLPPFSPDSL PGVPELSKHY
PLPSGYSIRI YNACLIAALA IRSPGQSIAP ILEIYNELLE KDMIPDSMTY GAVIRALAMR
ERDVRGSQEI WERQKTWGLW RSEISGNQTW DPEVAAENDA NIEAYLAENN VLSAVRLFRA
AALTGQAGRF VVSIHGTVLD ALSKLEKPDV TVMEQLVEHA ESHEVPGIIS LYKHLFLAYA
KIKDASALSQ VWNKYRGLAK TASREDWAAA CGQREAYDVR IEGAMREPWD IVISAFIEVG
ELSKAFEVFG EMAEVAEKKT KAEVPPATHR TCGVLVTALA RAGEFDLALE WFNSLQASAI
VTQNSPHRLT LEHTIVLAEQ LLLKGRWFDA ADVVIGLGGI RDELAQPSAQ HSLRTVAWKT
NFALIHHAAR STPEEAARTL ARAQEVLAAV PIQLDLRTVV LHLTLLAQAS DYTNMIRVVD
LISARKLPAN TIQRLNDACD QIAKEDIPFK YRIELIKAFG RHHADLTPFV AEKLIQAYIS
EKSKPVDERD LSKESLYILL DAFTVVEQKQ VNEGEYDEAL EQLMQDLAAT DVSEDMKNAT
SNQAIGYLVK NVIFRFGAER ARSMLGAVFG EQEATNLVQP VSPTFIQSET VSGSERLSEA
ASPSQSHASS ATSAPALSFS QTLTSSIERF TYRNPTITPL EAYALLRDGL SVSQVPRLEI
ILSLMDHLAR RNDEPKVREL YELAQVVLNS LVRPDVQAQS WYSAENAMLI ACCHLGYLEE
AGLHRARIVQ AGFTPSADAY ATMIASSKDT TDDALVAREL WEEALGMGVK PHLFLYNTVI
SKLSKARKAE SALDLFMRMK SERIRPSSVT YGAVINACCR VGDALSAETL FEEMTSQPNF
RPRVPPYNTM MQFYLQTQPN RERFLYYYGA LQRARVPPSA HTYKLLIDAY ATLPPIDIPA
MELVFAHLIA DKSVRVQGTH WASLISAYGI HAGDAKRAKE VFDKIPEKGG DYEAVVWEAW
LNVLSQQGTI EQLEEAHTRM LESGVQPTAY VYNVLINGYA RAGNIGRARE VFESMGDSIT
GVAAPNNHPV LLTSSGHAKP STQAATTGVV YREPSTYESM IRAEITCGDQ QRATEVLQRM
EERGYPMAVY MRGKAALEGE PPKF
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