Gene CNG04540 details

Gene Information

• Locus tag: CNG04540
• ID: 3258713
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006692
• Strand: -
• Start bp: 1291958
• End bp: 1294133
• Gene Length: 2176 bp
• Protein Length: 484 aa
• GC content: 46%
• IMG OID: 638258078
• Product: ubiquitin carboxyl-terminal hydrolase 6, putative
• Protein accession: XP_572134
• Protein GI: 58269956
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5533] Ubiquitin C-terminal hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCATACCGA TGCCCAAATC TCAAAATATG GAACGTGAGT ACCTGGATCA GGATGGTAGT 
AAGGTAATGC TGACACGTAG ATGCGTAGTC AGCGTAAAAC ATTCTGGCAA GACGTACACC 
GTTCCTGTCA CACAAGAGAC CACGACTCAG GCTTTCAAGG ATGCTATCTC TCAACTTACC 
AGGGTCCCTA CTGGTCAGTA TAATATCCTG AAAAGTGATT AAAATGGGAC TGACATGAAA 
TGTAGAGAGG ATGAAGGTTA TGGTGAAGGG CAAGCTGGTG AAGGTACGTT AATCGCTGGT 
GCCATTGAAT GATCCCTTTT AGAGAATTTC TGACAGAATC GTACTGTAGG ATGATACAGA 
TTATGTCGCT TTGGCAAATC AAAAGGTATA TCTATACCAA CGACAGGAAA CTTCAGACGG 
CTAAAGATCA TTACGTAGCA ATCTGTTATG GTAATTGGAG CAGCTGAAGC GTTACCACCA 
CCACCAACCC AGCAAATCGT CTTTTGTATG TTCCCGTCTT TTCCTAGATT GCAAAGACAC 
ACCAGAATAC TGAAGATATC ATCAGTGGAA GATGTAGGGG ATGAAGGCAT TAAATCCGAC 
GAACCCACGG GTCTCATCAA CCTCGGCAAC ACATGTTACC TCAACTCCAC GCTCCAAGCC 
ATCCGCGCTA TGCCCGAAGT CCACCAAGCG CTCAAAGAAT TCACTCCTTC CTCCTCCTCC 
TCTTCTTCCC TCCCCGAATT CCGCGTCACA AATTCGTTGA AAAATCTGTT TGTTACGATT 
GACAATACAC CTAATGCCGT TCCTCCATTG GAAGTTATCA GTAATTTGAG AATCTTGGCG 
CCTCAATTTG CAGAGAGGGA TCAGAGGGGG CATTACGCAC AGCAGGATGC GGATGAGGCT 
TGGACGCAGC TTGTGCAAGC GTTAAGGGCG GCGTTGCCGA AGAACGGGGA TGAAGGGTCT 
GTTGTGGACC GTTTGATGTC TATCGAATTA ACCAAGACGT GAGTCCCGTT TCAAATATAT 
TGACATTCAT GCTAATGCAC AATTGAAGTC TCAAAAATGC AGAGACAGAG GAAGAACCAG 
AGACAACTAG TACGGAGACT GTCTTGAAAC TGGAGTGTAA CATCTCTGGG ACCACAAATT 
TCTTGATGTC TGGTATTCAA GACAACCTTA ACCAGCAGGT TGAGAAGACG AGCGCGACAC 
TGGGACGAAA CGCAACTTAC TCTATGTAAG ACTGTCCATT TATCCATAGC TGATGGATCC 
ATGGCTGACG CTTGTTATAG GCAATCTCGC GTTTCTCGAT TGCCGGAGTA CCTTGTAGTG 
CACATGGTTC GATTTTATTG GCGTCGTGAC ATCCAGTGAG CCAACCCCGT AGTGTTCTTG 
GCTTTGGCTG ACAGATTATT AGGAAAAAGG CAAAGATCAT GCGTAAAGTC AAGTTTCCAC 
TCGAACTCGA CTTATCTGAC ATCGTACGTC GAGTCTCAGT GTATACCTCC CCTCTAACCA 
TACTAATACA CCTACCCTTT TTGGACAGGT GACCGAGCCC CTCCGCAAAA AGATTCAACC 
CCTTAACACG GCGACGAAAC AAATCCTCAA GGAACGTGAT GCCCGTGCGA ATATCTTGAA 
ACGAAAGCCC GGACAGGGAT TGGATGAAGA AGAAAAGAAA AGAGGTGAAG AAAAGGCTAT 
GGTGGAAGAG CTTGTGAAAG AAGGGGGACT AACCAGTGGA GAGGGGAGTG GAATGTACGA 
GCTCGCTGGT AAGTCTTCCC CCTTTCCTCC CCTAAATCTA AACCCAACTA ACATACCTTA 
GCTGTGGTAA CACACAAAGG CGCCTCTGCC GATTCCGGCC ATTATATTGG CTGGTCTCGC 
GTTGACAATG GCGCATGTGT CCCTGCCGAA CAACAGAGAT GGGCCAAGTT CGACGATAAC 
AATGTAACTT TCACAGATGC GAACAAGATC TTGTCAATGG ATGGAGGTGG TGAGGATTCA 
GTAGCTTATA TTTTGCTTTA TCGGGCGGCG AAAATCTAGA TTGACAGGGA GTAACCCAGA 
GATATGCTTT TGAATATTGC ATAGGAAGAC TTAGAAGTAC ATCAAAGTGT TGTCATACGA 
TTTGAGCCTT ACAGTGATGC ATTTGACGGA CTAAGAGCGA ACGCCCTGCA TCGCTGCGCG 
CATGAATTTA AACAGA 

 

Protein sequence

MPKSQNMELS VKHSGKTYTV PVTQETTTQA FKDAISQLTR VPTERMKVMV KGKLVKDDTD 
YVALANQKQS VMVIGAAEAL PPPPTQQIVF LEDVGDEGIK SDEPTGLINL GNTCYLNSTL 
QAIRAMPEVH QALKEFTPSS SSSSSLPEFR VTNSLKNLFV TIDNTPNAVP PLEVISNLRI 
LAPQFAERDQ RGHYAQQDAD EAWTQLVQAL RAALPKNGDE GSVVDRLMSI ELTKTLKNAE 
TEEEPETTST ETVLKLECNI SGTTNFLMSG IQDNLNQQVE KTSATLGRNA TYSMQSRVSR 
LPEYLVVHMV RFYWRRDIQK KAKIMRKVKF PLELDLSDIV TEPLRKKIQP LNTATKQILK 
ERDARANILK RKPGQGLDEE EKKRGEEKAM VEELVKEGGL TSGEGSGMYE LAAVVTHKGA 
SADSGHYIGW SRVDNGACVP AEQQRWAKFD DNNVTFTDAN KILSMDGGGE DSVAYILLYR 
AAKI