Gene CNG03650 details

Gene Information

• Locus tag: CNG03650
• ID: 3258580
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006692
• Strand: +
• Start bp: 1022415
• End bp: 1024461
• Gene Length: 2047 bp
• Protein Length: 620 aa
• GC content: 52%
• IMG OID: 638257989
• Product: ATP dependent RNA helicase, putative
• Protein accession: XP_572072
• Protein GI: 58269832
• COG category: [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0513] Superfamily II DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.451389
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACCACAATGG CATCTGCATT CAGCTTGCTC ACAGCAGGAG GAGCAAAGTT TGACAAGAAC 
AGGTTCAAGG ACGACTTCCA GCTCTTCGAA GCGGTGCGTT GCCTTCCTTT GCCCCTCGGG 
ATATCGACTA ACGTGGCTGT TGCAGAAGAA GCGTAAGGAT CGTAAGGGTA AGAGCAAGCA 
GATAGACACC CTGGCCACAG GATCAGCCCT TCCCAGCTCG TTAGATTTCT TTGGAGACCA 
CCCCCACCCT CAGCACAAGC CAGAGCCAGA GCCGGAATCC GAGTCCGAGT CAGACTTTGA 
ATCCGACTCT GGTTCCTCCT CAACATCTAT ACCTGCACCT CCTCCTCAAA AGATTACCCT 
GACCGGAGCG GAACCACTTC CCAAATCCCT TCACACCAAT CTGCCATCAT TGGTCAATCA 
TGAATCCCAC TCACTTACTT CTGCCGAAGG AGGACCTCTT CTGTCTGCTC TCTCTCGAGC 
AAACATTCAC TCTCTTTGGG GTGTACAGTG TGCTGTCGGA GGATGCCTGT TGGAAGACAG 
AGATACCCTG TGTGTTGCTC CCACCGGTTC TGGAAAGACA TTGTCTTATG TGCTTCCCAC 
CATCGTCAAG CTGCGTGAGC CCGCAAGGAA ACTCAAAGGC ACCGAAGAAG GCAAAGGTGT 
GAGGGCATTA GTTGTGGTAC CCACGCACGA TTTGGCAGTT CAGATCCAGG GTGTCATCAA 
GGCGGTAACT ATGGGTAGGC ATTGGAGGTC CATGGTTCTT ACAAAGGCTA CCGAGAAGGC 
GGTTTGGGAA AGTGCTCCAG GGGAAGCTGT CAAGACGGGC GAGGATGGTG ACAGTGAGAT 
AAAGGACGGA GAGGACAGTG GAGACGAAGA AGAAGACGAA GACGACAATG GGTCTACTGG 
CTCTGTGGAC GAGTTTGCGC CCAAGGTCTC TGGCAACCCC GAAGGACTAG GTATCGACAT 
GCTCGTCGCT ACACCAGAGC GTCTTCACCA CCTCATCGAT TCCAGACGAA TCTCTCTTGC 
TCGGTAAGTT GTCGTTACTC ATCTTCGTGG GGTTAATCAT TAATATGCTT TAGAACCAAA 
TATGTTATCC TCGACGAGTC GGATCGTCTT CTTTCATCCG ATTTCCTCCC CCAAGTCGAA 
CCCATCCTCT CAGCATGCTC CAACCCTGCC GTCCAAAAGT GCTTCCTGTC CGCCACCATG 
CCTGCAGGCG CTGAATCCCT CGCCAAAAAA TGGCTAAAGG ATGGTGGCGT TCGTGTGGTT 
GTCGGCGTGA AAGACTCTGC AGTCACCACT GTCGACCAGT CCCTTCTCTA CACAGGCTCC 
GAATCGGGTA AACTCCTCGC CCTTCGAAAC CTCATTTCCT CCGGTCAACT TCCATACCCT 
TCACTTATCT TTGTGCAATC TATCGACCGA GCAGAAGAGC TTTACAAGAC GTTGGTGTTG 
GATGGGATTA AGGTGGATGC TGTGCATGGT GGCAAGGCAA AGACGAAGAG AGATGAGGCT 
ATCAAGGACT TTAGGGTGGG CGCGGTTTGG ATGCTGGTCG TCACGGAAGT TTTGGCGCGA 
GGAATGGACT TTCGAGGTGT CAAGGTTGTC ATCAACTATG GTACGTCACG CCTCTTTTTC 
CCCCACAGAA CCCACTTGAA CATCATCTAA TGCCCAAATC TTCAACTTTT CTGTAGACTT 
CCCCCAGACT GTCCCGAGTT ATATCCACCG AATAGGTCGT ACCGGTCGAG CCGGTCGTCC 
AGGAAAAGCC ATAACATTCT TCAACATTGA AGACGGACCT TACCTCCGTA CCATCGCCAA 
TGTCCTCCGC TCTTCTGGGT GCCCAGTTCC AGAGTATATG CTGGATATGA AGAAGCCTAC 
CAAGAATGAG AAGAAGAAGC TCGCCAAGGC CCCACCGAAG AGGAAGGCTG TTGGTGGAGG 
TGGAAGAGAC TTGAATAGGG AAGCAGGGAA GAAGAAGAAG CAGATGGTTG AGGCTAGTAA 
GAAGAGGAAG ATGTTGGAAA GGAAAGGGAA GGGTGGAAAC GAGGAGAAGA ATGACGATGA 
GGAATAG 

 

Protein sequence

MASAFSLLTA GGAKFDKNRF KDDFQLFEAK KRKDRKGKSK QIDTLATGSA LPSSLDFFGD 
HPHPQHKPEP EPESESESDF ESDSGSSSTS IPAPPPQKIT LTGAEPLPKS LHTNLPSLVN 
HESHSLTSAE GGPLLSALSR ANIHSLWGVQ CAVGGCLLED RDTLCVAPTG SGKTLSYVLP 
TIVKLREPAR KLKGTEEGKG VRALVVVPTH DLAVQIQGVI KAVTMGRHWR SMVLTKATEK 
AVWESAPGEA VKTGEDGDSE IKDGEDSGDE EEDEDDNGST GSVDEFAPKV SGNPEGLGID 
MLVATPERLH HLIDSRRISL ARTKYVILDE SDRLLSSDFL PQVEPILSAC SNPAVQKCFL 
SATMPAGAES LAKKWLKDGG VRVVVGVKDS AVTTVDQSLL YTGSESGKLL ALRNLISSGQ 
LPYPSLIFVQ SIDRAEELYK TLVLDGIKVD AVHGGKAKTK RDEAIKDFRV GAVWMLVVTE 
VLARGMDFRG VKVVINYDFP QTVPSYIHRI GRTGRAGRPG KAITFFNIED GPYLRTIANV 
LRSSGCPVPE YMLDMKKPTK NEKKKLAKAP PKRKAVGGGG RDLNREAGKK KKQMVEASKK 
RKMLERKGKG GNEEKNDDEE