Gene CNF04180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF04180 
Symbol 
ID3258431 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp1215795 
End bp1218473 
Gene Length2679 bp 
Protein Length589 aa 
Translation table 
GC content47% 
IMG OID638257536 
Productconserved hypothetical protein 
Protein accessionXP_571384 
Protein GI58268456 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATATACTA ATAACAAACA ACGCCATTAG CCGCAGGGCA TAATATGCCT CCCAGGCTTA 
GACATTATCA TCAACCTCAG CCCATTATCA ATGGGGGCAT GCCATATCAG CGGCATCCAC
CTCCTCGGAT TCCCTCCACT CGGTCCCTTC ACCTCTCAAT ATCTCTGCTG ATTATTGCTG
CAGTCATCGT CTATGCACAG AAGCAATCTT TTCTAAAGAA TGTGCTACCT CCTAAAGTGT
ACTCAGTGAC AGAGGCTTTG CCTGAAAAAT ATGCAATCTG TGGAAAAGAA GGGAATAAGG
TGTATACAGT GCCTTATGAG GTCGAAACTG TCATTGAAAT CGCTGGGACA GCAGAGTGGG
AGAAGGAAGC TGTAGGAGCA GTGGAATGTG TGGTAGTGGA AAATGACACG GTTGTTGACA
CCGGTAGCTT GAGTAAGCTT ATCTGAAAAA AATTGCCTAT GGGACTTAGG CTAATAGCAG
CCTGTACAAC AGATAAGATC AGGCGAAAGT GGATCAAGAA GACTTTGAGC AAGACAACAC
AGGATGACTT TCAGGTCATT CACCTCCCTC CCGGGCATAC TCTAACACCT GTACATCTTT
CACTACGCAT ATGGATAACC AAATTGCTAA AAGTTGAAAC AGGGCTTCAC AGACTCCCAT
GGTCATCCCT TGCTATACGG CCGCGCCCAA CAACTGCCCT TACACGGGTG CAAGTCTATT
GAAGAAGTCA TAGCGAAGGT TGAATCTTAC GTGAATCACC ACCCATTAGA AGAGGGACAA
TGGATAGAAG GGTTGGGGTG GGATCAAAAT CTCTGGAAAG ACAAAGTTTT CCCTACAGCT
GTGTGTGCAT GCTCTTCCGC CGTACAGGCA CCTAGAGCTG ATAATGCTTG TAGGAAGAAT
TTGACAAGTC AGACATCTTG AGGGGATTAC CTATAAGCCT GGCTAGAGTA GACTTTCATG
TTGAGTGGGT CTCAACCGCC GTCCTTCGTT TGATGGATAG CATTCCCGAT GTCGAAGGTG
GTACCGTTGT GCGCGATTCC CAAGGGGAAC CGACTGGTAT CTTTGTGCGT ATCAAACTAG
CCTTTTTCTA TGGTAACTGA AACTGATCAA ACATCAATTT AGATCGATAA TGCCATTTCC
CTTCTTACTG CCATCCGGCC GGCCTGGACT GACATCGACC GAGAACGGTT TCTCAATATT
GTGGTACAGG ATGCTTTGAG CCATGGGTTA ACAGGCGCAT ATGATGCTAT GGGACTGATC
AGCGATCAAC CTTTCTGGCG AAGAATGGCG GAAGAGGGAA AACTACCCCT TCGTTTCTAC
TCTATGGTGG GTAACGGTGC GCATAACGAG ATAGAATCAT TTTGACGTAT ATCAGCTTTC
TTGTGAAGAC GAAGACTTTT GTGGAGATAA GGTAGAACCT TACCATAACT TTGGTGAGTC
TCTTCTCCGA TCTTTTACCT CTCCCATTTG CTCTATCTGA CCACGTTGTC TAGAGAAACA
TTATTACATG CGTGGTGTCA AGCTCTTCGG TGATGGTGCA TTAGGCTCCC GTGGCGCTGC
CTTGATTGAT GACTACAGCG ATCAGCCGGG ATGGAAGGGA TTGATGTTGA AGAATGAAGA
GTCTTGGGGA CCATTAATAA AGCAATGACA TGAAGCTGTG AGTCACATGG ATCTATTCGA
CTATTTAAAG CTAATGTAGA ATTATAGGGG TGGCAAGTCG TGAGTTAGAC CCCCAGTCTA
CAACGCAATT CAAGCTCTGC CCTTGAAGTC TAAAGTCTGA TATCAAAATC AGTGTGTGCA
TACTATAGGT GATCGGGCCG CCAAAGTAGT GCTCGATGCC ATCTCGTCTG CCACTGATCC
TCCTGGCATT CGCAAGGCAA GATTCCGACT GGAGCATGCT CAGATTATGA CACTAGAAGA
CCTGGAACGT GCCGCTAAGA TGGGCAGTAA GTCATCGATC GCCTCCTGTG GAGAAAGGTA
AAGAAAACTG ATGTATCATT TAACAGTTAT CGCGAGTGTG CAGCCAACCC ATGCTACAAG
CGATGTATAT CCCTTTCTTT TTCGCCGTCC CCCTGAAGAG AAACGTCTGA CGTGAATGTG
TAGATGTGGT ACGCTGAAGA TCGCTTGGGC AAAGAACGTA TCCGAGGTGC CTATGCTTGG
CGTTCATATC TCAAGTACGT TTCAAGCTTC CCATCCTTCT TGCACCCTTT AACACGCCCG
CTAACCATCA TACAAAACAG CAACTCAGGT CACATTACTC TAGGTTCCGA CTTCCCCGTC
GAATCTATTG ACCCACTGAA AGGATTTTAC GCCGCTGTAA CTCGTAAATC ACCGGAAGGC
AAATCTCCTC ATGGCAAGAG AGGATGGTAT CCGGAACAAA GACTGAGTAG GGTTGAGGTC
CTTAGGGGTT TTACCGTATG GGGTAAGTCA AGTAGGGTTT TTATAGTTTG CCTGATGTCT
TATGAGAGAG AGATGACGAG CTCACCATCC GGGTCTTTTT TATTAGGAGC GTATGCTTCG
TTCTCAGAGG ACCGTGTCGG GTCTTTGACT TCTGGGAAGA AATTTGACGC TGTGATATGG
GATGATGATT TACTTACTGT ACCAGAAGAC GAGATGTTGG ATGTGAAAGT CAAAGGGGTG
ATTGTGGATG GCAAGTTGGT CTGGGGGACT TTGGGATGA
 
Protein sequence
MPPRLRHYHQ PQPIINGGMP YQRHPPPRIP STRSLHLSIS LLIIAAVIVY AQKQSFLKNV 
LPPKVYSVTE ALPEKYAICG KEGNKVYTVP YEVETVIEIA GTAEWEKEAV GAVECVVVEN
DTVVDTGSLN KIRRKWIKKT LSKTTQDDFQ VIHLPPGHTL TPGFTDSHGH PLLYGRAQQL
PLHGCKSIEE VIAKVESYVN HHPLEEGQWI EGLGWDQNLW KDKVFPTAEE FDKSDILRGL
PISLARVDFH VEWVSTAVLR LMDSIPDVEG GTVVRDSQGE PTGIFIDNAI SLLTAIRPAW
TDIDRERFLN IVVQDALSHG LTGAYDAMGL ISDQPFWRRM AEEGKLPLRF YSMLSCEDED
FCGDKVEPYH NFEKHYYMRG GWQVCVHTIG DRAAKVVLDA ISSATDPPGI RKARFRLEHA
QIMTLEDLER AAKMGIIASV QPTHATSDMW YAEDRLGKER IRGAYAWRSY LNNSGHITLG
SDFPVESIDP LKGFYAAVTR KSPEGKSPHG KRGWYPEQRL SRVEVLRGFT VWGAYASFSE
DRVGSLTSGK KFDAVIWDDD LLTVPEDEML DVKVKGVIVD GKLVWGTLG