| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF03920 |
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| Symbol | |
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| ID | 3258437 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 1142633 |
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| End bp | 1145361 |
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| Gene Length | 2729 bp |
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| Protein Length | 783 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638257511 |
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| Product | pre-mRNA splicing factor, putative |
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| Protein accession | XP_571352 |
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| Protein GI | 58268392 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCAAACGAAT CATATACTTC TTTGACGTAT AACCATGTCT GAGCCCCCTG CTAAAAGGTC
AAAGATGGAC TCTACTGCAG CTTCCGAAAA CAACCCCTAC CTGTGCGTAT TTTATCTGTG
TTTGAAGAAC GAGCTGATGT CGAGAACAGC GCCCACAGGA ATGAAGGTCC TTCATACGGT
GGAATGACCA ACGGCGCCAA CGGTGTGACT GGCTCTATCG ACCGGAATGA ACACCCCTTA
AACGGAATGG TTCCTAGAAA AGTCACCGTT GACCAGGCCA AGAAGATCAT GGTTAGTCCA
GTTGGGTATC ACTTCGAAGG GTCAGTAGCT GATGTGTCAT AGGATGGCGA TGTAAACCCA
TTCAAGAACC TCGCTCCTTG GTCCAACACC TACAAAAGGA TTTTGGAGCA GCGAAAAGGT
CTACCCGTCT ACCAGAAGAT GCAGGAGTTC CTTACAGTGT TCAACGAGAA CCAGATTGTA
GTCATGGAAG GTCAGACCGG TTCCGGAAAG ACTACCCAGA TTCCTCAATT CGTCTGTTAT
TCCGATCTGC CGATGTTAAG GGGCAAGATG GTCGCCTGTA CCCAACCTCG ACGGGTCGCT
GCTATGAGTG TTGCTAAGCG AGTTGCCGAT GAAATGGATG GTGAGTTTCC TGTATGTCAA
CATGGTTGGA CAGAACTAAT GTGTTTTAGT TCAATTGGGA AAGCAGGTCG GTTACTCTAT
TCGATTTGAA GATATGACCG AACCCGGAAC TACCTTCCTT AAGTACATGA CCGATGGTAT
GCTCCTCCGA GAAGCCATGA ACGACCCCTT GCTCGAGCGA TACTCAACAG TCATTTTGGA
CGAAGCGCAC GAGCGTACAT TGGCCACCGA TATCTTGATG GGTCTCTTGA AGGACATTGC
GAAGAGACGA TCAGACTTGA AAATCATTGT CATGTCTGCT ACTCTTGATG TTGCAAAGTT
CCAAAAGTAC TTTGGAGACA CCAACCCCAC CGGCCTCGCC CCTGTTGTCA AGGTTTCTGG
TCGAACTTTC CCGGTCGAAA CTTTCTTCAC ACAAGAGCCC GAAAACGATT ACGTCGAAGC
TGCCATCCGA ACAGTTCTTT TCATTCATCA AGCAGAAGAT GAAGGTGATG TTTTGCTGTT
CTTAACTGGT GAAGAGGAAA TCGAAGATGC TTGCCGGAAA ATCAGAGCCG AGGGCGAAGA
GCTTGCCAAT AAGGGCATGG CCGGTCCTTT GCTGGTTGTC CCTCTCTATT CTTCCCTTCC
CCCTCATCAA CAACAGCGAA TTTTCGACCC TGCTCCTCCC GCGCGCAAAG ATGGTCTACC
GGGACGAAAG GTCGTTGTTT CCACCAACAT TGCCGAAACC TCCCTTACTA TTGACGGAAT
CGTTTACGTA GTTGATCCCG GTTTCTGCAA GCAAAAAGTC TACAATCCTC GTATCCGAGT
GGAGTCCTTG TTAGTCACCC CTATATCCAA GGCGTCAGCG ATGCAGCGTG CTGGTCGTGC
TGGCCGTACA AGACCTGGCA AGTGTTTCAG GTTGTACACT GAGAGGGACT TTGTCAAGGA
GTTAGAGGAG CAGACCCACC CGGAAATCTT GAGGAGTAAT TTGGCAAACA CAGTTTTGGA
ATTGATCAAG CTTGGTATCA AAGATCTTGT GCATTTTGAC TACATGGGTA AGTTCCCCTT
CTGTTGCCTC GTCTGAGCAT TTACTGATTC GCTCCATAGA CGCTCCTGCA CCCGAGACTA
TCATGCGTGC TCTTGAGCTG TTGCATTATC TTGCAGCCCT CGACGATGAC GGCAACCTCA
CCCCTCTCGG TTCCATCATG GCCGAATTCC CTCTCGATCC TCAATTGGCC AAGATGCTCA
TCGTCTCTCC CGAATTCGGC TGCTCCAATG AGATCCTGTC TCTCACCGCC ATGCTTTCAG
TCCCCAATGT CTTCATGCGT CCCGCCTCTC AACGAAAAGA AGCTGATTTG GCTAAGGCCC
AATTCACCCA CCCAGATGGC GATCACCTCA CCATGCTTAA CGTTTACCAC GCCTACAAGT
CTAACGAAGA CGATGCCAAG AGCTGGTGTT GGCAAAACTA CCTTAACCAG CGGAGTCTTG
CCCAGGCGGA CAACGTGCGA ACGCAGTTGA AGCGAGCGAT GGAGAAGTTT GACTTGGAGT
TGTGCAGTAC GGCATGGGAG GACAGGAACT ATTGGAACAA CATCCGTCAG GCGTTAACTT
GTGGCTTCTT CATGCATGTG GCGCATAAGG AGGGTGAAAA GGGTAGCTAT ATGACTGTTA
AGGACAACCA AGTAAGTCCA TGTGCTCGTG GGCGATTCAA TTCTGACAAT TATGTAGGTT
GTACGGCTGC ATCTTTCTTG CGGCTTAGAC ACTACACCTG AATGGGTCAT CTACAACGAA
TTTGTCTTGA CCACTGCCAA CGTGAGTAGC CCATGACCTG TCTCTGGATC ACTTTGTCTA
ATACTTCCTG TAGTTCATTC GTACAGTAAC TGAAGTTCGT CCCGAATGGC TTCTCGAATA
CGCTCCTCAA TACTTTGACC CTGAGACATT CCCCGCCAAC AGCGAAACCC GACGGGCGTT
GCAGCGAGTG TTGGACAGGA AATTGGGCAA GATTTCTAGT AGCAAGCACG GAAAGGATGG
CAAGGACAAG AAGGACAAGA AGAAGAAGAG GAAGGCGGAG TGATGGCGTA CTGGTTATTG
TCTATAGAGG CGGTAATGTA GATGACTCT
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| Protein sequence | MSEPPAKRSK MDSTAASENN PYLAHRNEGP SYGGMTNGAN GVTGSIDRNE HPLNGMVPRK
VTVDQAKKIM DGDVNPFKNL APWSNTYKRI LEQRKGLPVY QKMQEFLTVF NENQIVVMEG
QTGSGKTTQI PQFVCYSDLP MLRGKMVACT QPRRVAAMSV AKRVADEMDV QLGKQVGYSI
RFEDMTEPGT TFLKYMTDGM LLREAMNDPL LERYSTVILD EAHERTLATD ILMGLLKDIA
KRRSDLKIIV MSATLDVAKF QKYFGDTNPT GLAPVVKVSG RTFPVETFFT QEPENDYVEA
AIRTVLFIHQ AEDEGDVLLF LTGEEEIEDA CRKIRAEGEE LANKGMAGPL LVVPLYSSLP
PHQQQRIFDP APPARKDGLP GRKVVVSTNI AETSLTIDGI VYVVDPGFCK QKVYNPRIRV
ESLLVTPISK ASAMQRAGRA GRTRPGKCFR LYTERDFVKE LEEQTHPEIL RSNLANTVLE
LIKLGIKDLV HFDYMDAPAP ETIMRALELL HYLAALDDDG NLTPLGSIMA EFPLDPQLAK
MLIVSPEFGC SNEILSLTAM LSVPNVFMRP ASQRKEADLA KAQFTHPDGD HLTMLNVYHA
YKSNEDDAKS WCWQNYLNQR SLAQADNVRT QLKRAMEKFD LELCSTAWED RNYWNNIRQA
LTCGFFMHVA HKEGEKGSYM TVKDNQVVRL HLSCGLDTTP EWVIYNEFVL TTANFIRTVT
EVRPEWLLEY APQYFDPETF PANSETRRAL QRVLDRKLGK ISSSKHGKDG KDKKDKKKKR
KAE
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