| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF02520 |
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| Symbol | |
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| ID | 3258324 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 728566 |
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| End bp | 732502 |
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| Gene Length | 3937 bp |
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| Protein Length | 1012 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638257378 |
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| Product | alanine-tRNA ligase, putative |
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| Protein accession | XP_571590 |
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| Protein GI | 58268868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTCCGCTATC CCCTTTTGCT CCCTCTAGAT CCTCCTTCAC CTAGCGACGG CTCTGATTGG
AAACCGCTAT CCTATCAGGT ACACGACATT GTATGCTCTT TGGCTCGGTA TCTACCCGGT
CCATCACCTC TCACTTCAAG TTCGCCCCTC GCCTCCTTTC AAAAACCTCT TTCACTGTTT
CTGCCCAGTC ATCATCAAAG AAAATGGGTG TCAACGATAA GCCTACCATT CCCACTACCG
CCCCTCACGC TTGGCCTTCC CCTGAGGATT GGCCTGCTGC CAAAGTGAGG CAGACGTTTA
TCGATTATTT TGTCAACCAA CCTGGATTCG AGCACACTTT CTGGCCCTCC AGTGGTGTCG
TTCCTTTTGA CGATGACACG CTTCTTTTCG CCAATGCTGT GAGTGTAACT TTAAAATAGA
TAGCGCCAGT TGCCAGATCC CTCTTCATAT CCATGTTCTG ATATACTTTT ATCTATAGGG
TATGAACCAG TACAAGCCTC TCTTCCTGGG GACCGCAGAC CCCAAGTCTG AACTTTCCAA
ACTCATCCGT GCCGCTAACA GTCAGAAATG TATCCGTGCG GGTGGAAAAC ACAACGGTTG
GTTTATCTCG ACTCGATTTA GAGCCGTCCT TTGGGTTTAT CGCCAGAGAG ATGCTGATAG
GACACGCCAC ATAGACCTTG ACGACGTAGG AAAGGACACT TACCACCATA CTTTCTTTGA
AATGCTTGGA AACTGGTCAT TCGGCGATTA TTTCAAGGTA TGTATTACTG AATCTGCCCG
GCATAGGTCT TTATGATTGA GTGGCGATTC AGGTTGGAGC TTTGACCATG GCCTGGGACC
TTCTTACTCG AGTCTACGGA TTGCCTAAGG ACAGGCTCTA TGTGACCTAC TTCGAGGGCG
ATGCCAAGCA AGGCCTTGAA CCCGACTCTG AGGCCCAGTT AGTTGCTCTT TTTTCTCTCT
TCATTTCATG ACTCACAATT CGTTTTTAGG CAAATTTGGA GAGATCTTGG CGTGCCAGAG
AGCCACATTC TTCCTGGCAA CGCAAAGGAC AACTTCTGGG GTAAGTGTGA CAATTCATGG
ATTTCGTGGC GTCTTTCTGA CGAGACATAG AAATGGGCGC TACTGGTCCT TGCGGCCCTT
GCAGGTGCGT ATAATTAGCT TCCGTTGAAA TGAGCGTTAG CTTACTAGGA TTTACAGTGA
AATCCATTTT GACCGAATCG GTGGCCGAGA CGCCGCTCAC CTTGTCAACG CCGATGACCC
CAATGTCCTT GAGATCTGGA ACAACGTTTT CATCCAGTAC AACCGTGAGC CCTCGGGTGA
ATTGCGAACA CTTCCTGCCA AGCACGTAGA CACTGGAATG GGTTTCGAAC GACTTGTTTC
CGTACTCCAC AACGTCTCTT CCAACTACGA TACAGACGTT TTCACTCCCA TATTTTCCAA
GATTCAGGAG CTTACTGGCG CACGACCTTA TGAAGGCAAA CTTGGTGACG AAGATAAAGA
CGGTATCGAC ACTGCCTATA GAGTCATCGC GGATCACATC AGAACTTTGA CTATTGCCAT
CTCCGATGGC GGTATTCCTG ATAAGGACGG CAGAGGATAT GTCCTTCGAC GCGTGTTGCG
AAGAGGTGTG CGTTATGCCA GCAACAAATT TGGTGTCAAG ATTGGTACTT TCTTCTCCTC
TCTCGTACCC ACTGTTGTCG AATCTCTTGT AAGTGTCGGA TATCACTTCA TTAAGCGCAT
TCACTCATGC ATACTGTGTA GGGTCCCATC TTCCCTGAAG TTACTAAGAA GATTCCCGAG
CTCACCGAGA TCCTCAATGA AGAGGAAGCC TCTTTCGCTC GCACGCTCAA CAGAGGTGAA
GCTCTTTTCA ATAAGTACGC CACCACTGCC ATTGACGAGA AGCGAACTGT TCTTTCTGGA
AAGGACATCT GGCGACTGTA CGACACCTAC GGATTCCCTG TCGATCTTAC GCAGATCATG
GCCGAAGAGA GGGGATTGAA GATTGACCAG GAAGCCTTTG AGAAAGCCAG GCTCGAATCT
CTGGAAGCGA GCAAGGCCGG TGGCAAGGAA AAGGCTGGTG CCCTAGTCAA GCTCGATGTG
CACGACTTGG CCGCTTTGGA GGCTAACGAC GCGGTGCCCA AGACTGATGA TTCTTTCAAA
TATCGTACGT ATTATATGGT CATCTTACTC ATGGCTTTTA CTGACCAGCC TGTTTAGATT
TGGATGACAT CAAGGCTAAT GTCAAGAGCA TTTACCATGG CTCCAAGTTC CTCAACTCCA
CTTCTGAGCT TCCTCCCAAT ACTACATTCG GTATCCTGCT CGACCGAACC AATTTCTATG
CTGAGTCAGG TGGTCAAGAG TATGACACTG GTGTGATTGC TATCGATGGC AAGGCCGAGT
TCAAGGTGGA GGATGTTCAA GTTTACAATG GTTATGTGTT GCACATTGGA CGGATGGAGG
AGGGTGATAT CGAGATCGGA GACGAAGTAA TCTGCACGTA CGACGAGCTT CGTCGATGGC
CTATCCGGAA TAACCACACA GGCACCCATA TCCTCAACTT TGCCCTTCGA GAAGTCCTTG
GCGACCACAT TGACCAGAAG GGCTCCCTCG TTGCTCCTAC CAAACTTCGA TTTGACTTTT
CTCACGGCAA ATCTATTGCG GTCCCGGAAT TGATCAAAAT TGAGGGCATC TGCAATGACT
GGATCAAGAG AGGTGTCCCA GTATATGCTA AGGATATGCC TCTGGCCGAA GCTTACAAAA
TCCCTGGTCT TCGTGCAGTT TTTGGCGAGG CTTACCCTGA CCCTGTCCGA GTCGTCTCCC
TTGGCTATCC TCTTGAAGAT ATTGCCAAGA ATGTCGAAGA TTCTAAATGG CGCCAGACCA
GTATTGAGTT CTGCGGCGGC ACTCATGTTG CCAAGACCGA TGATATCAAG GACTTCGTTA
TCATCGAGGA GTCCTCTATT GCTAAGGGCA TCAGACGAAT TGTTGCCGTC ACTGGCCATG
ATGCGCATGA CGTATCAAGG AAGGGCGTTG AGTTTGAGCG GAAGTTGCAG AGAATCAAGG
AATTGCAGGG CAAGGAGAAG GAAGTGGCCA TGAAACCTTT CTTGGTTGTG AGTAGGTCTG
TGCGCTTCCA GAGTCGTGGT TAATTGATTA TTCCATGTAG GAGCTTGGAC AGAGCGGCAT
CTCTTTGATC AAGAAGAATA GTCTCAAAGA ACAGTTTGAA AAAATCCAAG GGGAACTTGT
GGCCGCGGCT AAGGCCAAGG TAGCCGCTGA TTCCAAGATT GTACGCTCAG AATGACCATA
CTAGCGTTCA CGCCTTATCA CTGACACGTT TCATCGAACT CTGTTAGATC TCCGAGGCGA
TCAAGACTTA TTTCCAGGAA AACCCCAATG AAAACGTCTT TGCTGGTTCT TTCGACGTCG
GAGGTAACTC TAAAGTACGT GCGCTAGCTT TGAATATTAA ATCAATGCTA ATGATATTAA
TTGTAGACTT TGACCGCTGC CGTCGCGGCT GGCAAGTCTG CCTCGAAGGC TGTTTACGCT
TTCAGCGCCG ATCCAGAAAC GGGCAAGGTA GCTCATGTCA ATTACTTGCC CAAGCCGATA
TTGGAGAGCA AGGCTTTGGA TGCCAAGATA TGGTTGAACG AAGTGGCCAA GGTTATTGGC
GGCAAGGTAA TTACCATAGT CAGTCTCGGT GTAATGGGGT CCTTACTGAC ATGCTTTCTT
TAGGGCGGTG GCCGAGATGA CAGTGCGGCG GGCGTTGGTA GCGAAATTAG CAAGATTGAC
GAGGCCATCG TCGTTGCTAA GAGCGTTTAC AAGAAGAGGG TCGAGGGGGC GTAAAGCAAT
GAAGGGGGCT GTCTGGTATC TCGGACTGCG TGGCTTATTA TTTTCGTCGA TTTAGTCCAA
TTTGATCGTC TCTGTATGCA CTACGAGTGT CTCCGGT
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| Protein sequence | MLFGSVSTRS ITSHFKFAPR LLSKTSFTVS AQSSSKKMGV NDKPTIPTTA PHAWPSPEDW
PAAKVRQTFI DYFVNQPGFE HTFWPSSGVV PFDDDTLLFA NAGMNQYKPL FLGTADPKSE
LSKLIRAANS QKCIRAGGKH NDLDDVGKDT YHHTFFEMLG NWSFGDYFKV GALTMAWDLL
TRVYGLPKDR LYVTYFEGDA KQGLEPDSEA QQIWRDLGVP ESHILPGNAK DNFWEMGATG
PCGPCSEIHF DRIGGRDAAH LVNADDPNVL EIWNNVFIQY NREPSGELRT LPAKHVDTGM
GFERLVSVLH NVSSNYDTDV FTPIFSKIQE LTGARPYEGK LGDEDKDGID TAYRVIADHI
RTLTIAISDG GIPDKDGRGY VLRRVLRRGV RYASNKFGVK IGTFFSSLVP TVVESLGPIF
PEVTKKIPEL TEILNEEEAS FARTLNRGEA LFNKYATTAI DEKRTVLSGK DIWRLYDTYG
FPVDLTQIMA EERGLKIDQE AFEKARLESL EASKAGGKEK AGALVKLDVH DLAALEANDA
VPKTDDSFKY HLDDIKANVK SIYHGSKFLN STSELPPNTT FGILLDRTNF YAESGGQEYD
TGVIAIDGKA EFKVEDVQVY NGYVLHIGRM EEGDIEIGDE VICTYDELRR WPIRNNHTGT
HILNFALREV LGDHIDQKGS LVAPTKLRFD FSHGKSIAVP ELIKIEGICN DWIKRGVPVY
AKDMPLAEAY KIPGLRAVFG EAYPDPVRVV SLGYPLEDIA KNVEDSKWRQ TSIEFCGGTH
VAKTDDIKDF VIIEESSIAK GIRRIVAVTG HDAHDVSRKG VEFERKLQRI KELQGKEKEV
AMKPFLVELG QSGISLIKKN SLKEQFEKIQ GELVAAAKAK VAADSKIISE AIKTYFQENP
NENVFAGSFD VGGNSKTLTA AVAAGKSASK AVYAFSADPE TGKVAHVNYL PKPILESKAL
DAKIWLNEVA KVIGGKGGGR DDSAAGVGSE ISKIDEAIVV AKSVYKKRVE GA
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