Gene CNF02370 details

Gene Information

• Locus tag: CNF02370
• ID: 3258472
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 688721
• End bp: 690685
• Gene Length: 1965 bp
• Protein Length: 521 aa
• GC content: 48%
• IMG OID: 638257364
• Product: protein farnesyltransferase, putative
• Protein accession: XP_571334
• Protein GI: 58268356
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5029] Prenyltransferase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TATCAATACA GCTGCTACTC TCTTCTGGCA CTCTGCCCAA GTAGCTAATA TAATGGCTAC 
AGAATTCACT CCCTCAGTAT ACTCTCTTGT TTCCACGCCT CTTCCGTCAA ATTCGAGACC 
CTCAGCCACT CTCGACGAGC AAGCAGAAAC CGAAGATCTC ATCTCTCAAT TATTCGACCT 
CACCGCTGAC CCCAATGCCC TCGTCTCGCA GCATGGCAAA ATATATTCCG GTCTCAGGAA 
GCAAGAGCAT ACCCAATTTC TTGCCTCTAC TTTCTTTCAA TTGCCGGGAA AGTTTGTGAG 
CCTCGATGCT AGCCGACCAT GGTTAATATT CTGGACGGTG CATTCTCTTG ACCTCTTGGG 
CGTGGCTCTT GATCAGGGAA CAAAGGACAG GTGAGTTGAC GCCTGCATGG ATTTTGTAGC 
TTTGACTGAC TCCCTTGACA GGGTGGTGTC GACTTTGCTT CACTTCCTTT CGCCAATGGG 
CGGTTTCGCT GGTGGCCCTG CCAATTCTCA AATCCCTCAC CTGCTACCCA CCTACGCTTC 
TGTCTGCTCT CTAGCCATCA CAGGTAACGA CGGTCCGACA GGTGGTTGGA AGGATCTTGC 
AGATGCTAGA CAGAGCCTAT ATGAGTTCTT TATGAGGTGT AAGAGACCCG ATGGCGGCTT 
TGTCGTTTGT GAAGGGGGCG AAGTTGATGT CCGGTAAGTT CTTTTCGATC AGAATATTAG 
TAGCTCACTT GCAAATCTCA AGAGGGACAT ATTGTCTGTT GGTGGTTGCT ACTCTTCTTG 
ACATCATTAC ACCGGAACTT TTACACAATG TCGATAAATT TGTCTCTGCC TGCCAGACTT 
ATGAAGGCGG TTTCGCTTGC GCCTCTTTCC CGTTCCCTTC AGTTGTCCCG TCGACTTCTG 
CCCTTCCAAC ATCGGAACCC TCTTGTAGAG TTTCTATGGC AGAGGCACAC GGTGGATATA 
CTTCTTGTTC ACTGAATTCG CACTTCCTTC TTACCTCTGT ACCTCTTCCT TCTTTCCCGT 
CATCCATTGA TGCCAGTGCA GCGCTTCGAT GGACTGTCCT TCAACAGGGA GAAGCTATTG 
AAGGAGGAGG TTTCAGGGGA CGGACAAACA AATTGGTTGA CGGTTGTTAT TCATGGTGGG 
TTGGCGGTGG AGCCCCCGTA GCAGAAGAAT TAGTGAGGAG AGAAAAGAGC AAAAAAGTGA 
AAAAGTCGCG AGTTGAACTC ATTGAAGAAG AGGAGAAGGA AGGTGACTGG GAGGACGTTC 
CTCGTGAGTA GGCAAACCCC GTAGACGAAT TCATATTTTG ACAGTGCGAC CCTTATTAGC 
TATACCACCT ACCTTCAACC GGGGTTCGTC GCATGTCGAC AATATAAGGT CACTGCTGAC 
TTGCTCTCCT CTATAGTCGC TTTGCAAGAG TTCACTCTTG TTGCAGCTCA GCAGGATCCA 
GGTTCCACAG GTGGTCTTCG TGATAAGCCC GGGAAGTAAG TCATTGCTAC GGTTGTGACT 
CGGTGAGTAG CAAGCTAACT ATGTAAAGAC GTCCCGATCA ATACCATACT TGCAACAATC 
TCTCGGGTCT TTCTATCGCT CAGCATAAGA TGAGCCATTC TCCTTCCGCC GTGTCGTCTA 
ATCGTCTCAA ATTCGACGCA TCCAAGGGGC TTCCAGCCAT CGAACCTGTC GCTCCTGGGG 
GTGGGTGGAA GAATGAGGAT GAGAGGCGCA ACGCAAGGCG GGAGATTTGG GCCAATGCTC 
TTGGATGGAT CGAGGAAGAA GGGGGAGAAA TAATTGTGGG AGGAAGGGAC AACCGTGTTG 
TGAGTAGTCA TCTTGTGAAT ATCCTTTAGA ATGACTCAAT GTTTGACCAG AATACGACGA 
CCCCTGTCTT CAACATCCTT GGGTTAAGGT TGAAGCCGTT CATCAACTAT TTTTATTGTC 
AAGAGAATTG AACTCCGCAA TTGTAGAGGA AAATCGTATT ATCTT 

 

Protein sequence

MATEFTPSVY SLVSTPLPSN SRPSATLDEQ AETEDLISQL FDLTADPNAL VSQHGKIYSG 
LRKQEHTQFL ASTFFQLPGK FVSLDASRPW LIFWTVHSLD LLGVALDQGT KDRVVSTLLH 
FLSPMGGFAG GPANSQIPHL LPTYASVCSL AITGNDGPTG GWKDLADARQ SLYEFFMRCK 
RPDGGFVVCE GGEVDVRGTY CLLVVATLLD IITPELLHNV DKFVSACQTY EGGFACASFP 
FPSVVPSTSA LPTSEPSCRV SMAEAHGGYT SCSLNSHFLL TSVPLPSFPS SIDASAALRW 
TVLQQGEAIE GGGFRGRTNK LVDGCYSWWV GGGAPVAEEL VRREKSKKVK KSRVELIEEE 
EKEGDWEDVP PIPPTFNRVA LQEFTLVAAQ QDPGSTGGLR DKPGKRPDQY HTCNNLSGLS 
IAQHKMSHSP SAVSSNRLKF DASKGLPAIE PVAPGGGWKN EDERRNARRE IWANALGWIE 
EEGGEIIVGG RDNRVNTTTP VFNILGLRLK PFINYFYCQE N