Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF02300 |
Symbol | |
ID | 3258360 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | + |
Start bp | 667190 |
End bp | 671659 |
Gene Length | 4470 bp |
Protein Length | 1064 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257357 |
Product | Bromodomain and PHD finger-containing protein 3, putative |
Protein accession | XP_571331 |
Protein GI | 58268350 |
COG category | [R] General function prediction only |
COG ID | [COG5141] PHD zinc finger-containing protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.890789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCTCC ACGACCTCCC AAAGGTCTCC TTCACTCTCA TCACAGACGA TCCAGCCCTT CTCCATCCAG CAGGCGTACA GTCCGTGAGT CCTCAGCTCC TACTCTTTCG CCCTTGCTGA CCCGTATGCC ATAGGAGCAA AGCAGATCGT ACGGATGTAA GCTCGGCCTA TGCGCTCCAT CAAACCGCAA GCGCCTCACA CTGACGCATG ATGCCGCAGA CAATGACTTC TCTGACTTCG AAAGACCGGA GCACTACATT CGCTATATAG GTCGGTGACG CGCTCGATAG AAAGGTAGCC TCGACTGATT TGCATGATAG AACCCATCGA GTCAGAGTTG GCAGTGCAGG TTGAATATGA CATGGACGAA CAAGGTACGC CTCCATCTCT ACACATTGGT GATTGGTGAA ACAGTAGTTG ATGCGGATGC TGGGGATTGC AGACCAAGCA TGGTTAGATA CTTATAATGC TGAACGAAAG AAAGACCAAT GTGGGCCCAT TTCGTACGAA GTATTCGAGA TTATCATGGA CAAACTGGAG AAGGAATGGT TTAACTTGGT ACAGTCCTAT CGGCTCGTCT GTCCATCTAT TAGAAGCTGA TCACGACAAT ACAGTCTAAG CGGATACCGC AGCCGCAACA ACAACTGGCA CCTGAAGATT CTAAATGCTC CATCTGCGAT GATGGTGAGG GAGAAAACTC GAACGCGATT GTGTTCTGTG ACGGATGTAA TTTGGCGGTC CATCAAGGTA CGGAACACCA TTCTGCATCC GGACATCGTC CATAACTTCT TCGTAGACTG TTACGGTGTG CCATATATCC CGGAGGGCCA GTGGCTTTGT CGCAAGTGTA CGGTCTCTCC TGAGAACCCA GTAGTGCGTC TCTCGGATCT TTACCCACAA TCCTGCTGAT AGTCATTAGT CTTGCATCTT CTGTCCTAAC GAAGGCGGAG CTTTCAAGCA AACTACTACA GGCCATTGGG CTCATCTGCT ATGCGCAATC TGGATACCAG AGACCACCCT AGGAAATTCC ATATATATGG AGCCAGTCGA GTCAGTGGAG TTGGTGCCGA AGGGCAGATG GAAGCTGGCA AGTACTCCAT TTCATCTACA ATCCCTTCCT ACCGATGATC TGACAACTCT ATAGGTCTGT TCATTGTGCA AAGAGAGAGT CGGAGCTTGC ATTCAATGTG AAAACCGGAA TTGTTTCACG GCCTTCCATG TCACTTGCGC AAGACAGTTG GGTTTATTAA AAAGCATGAA ATCATTGACA ACCGACGGAA CTCTGCATGC GTACTGTCAT AAGCACATGC CAGTGAGTAC CGTTCGGTTT ATTGTCAACA TCACTAATCC GCGTCCTATT AGTTGGATGA ATCAAAGGAT CAGGAAGTGG AGGATGAGGA GGAAGAGGAC GATGGCTGGG AAGTGTCCCC TCGCAACCAT CACGCTCATG CCAAAACGAA ATCTAAAACT CAATCTTCCA AGTCACGAAC GTCGAAGTCT CACCCCACAC CTACGGCAAA ACGCCCAGCT CAACCATTGG TTATACCTGT CACCAAGAAA TCTGCCCAAG CGCATTCCAA ATCTTTTCGT CCTGGCCCGC CCATCATTCC CAAGATGATC GTGAATAGAA TTCTAGAGTA TGTCGGGAAA GTTCAGTTGA GGAAGAAGCC TCAGGTTGTA GAGAAGATAT GTAGGTATTG GAGTCTGAAA AGGGAAGCAA GAAGAGGAGC GCCACTGTTG AAAAGGTTGC ATCTTGAGGT GTGTTTCCCT CGCGATTTGT CCAATCGCGT TACTAACACA TGCAATAGCC TTGGACAGCA TCCACAGCCG CTAGAACTCA GACCGAGTCT GAAAAGGCTC AAAAACTCAA ATTTTTACAG ATGCTTCGAA ACGACCTTGA AAAGGTTCGC ATGCTGGCGG ACCTCGTTCG GAAGAGAGAA AAAGAAAAGT TGCGACAGGC GCAAGTTATC AAAGACGTGA TAGATCGATT CATCTTTCCA TATAGCGAGA GACTGAGGGT GACTTTAGAG AGAATATCTG CGTAAGTAAT CATTACTGAT TGTAACCTAA ATACACCCAC TAATCTTTGT GGTTGGCAGA ATGGATCGAC GCGAGATGTT TTTGAACCCG GTCACCCCAG CGGAAGCGCC TGATTATTCC GATATCGTCA AAGAACCGAT GTGTTGGTTG TATATAGACG AAAAGCTGGA AAAGAACGCT TATATAGATA TCGCAGATTT CAAGGTTGGT TGGCTTATCA TCGCGACAAG TAGTCACCTC ACTAATGGAA ATGAAACTGT AGCGTGATAT CATGCTCGTG CTTGACAACG CCATGCTATA CAACGCCAGA GATACACCTT TTCATCGTGC GGCGTCCAAA CTCAAAACTG CTGCTCAGCC TCTTTTGAAT GAGCTCGACT CCATCACAGC ATCCCATCAA TCCACCTCTA CAGAGTCCCT TGTACCGTCT GACCTCCCAG TTGGGGACCT CGAGCCTGCT TTGCCCCATA TACTCGCCTT CTTCCAAGAA ACAACTGTCT CCTCACAACC TGAGGAACCT CAAGACCTGC TGACATCCCT TTTTGCAACC GAGCTTGAAC CCCCCAAACC TCCCACACCG ACACCATCAC CTCCCCCCCA ACCCAGAAAA TACCGCAGGC CTACAAAGGA AGAGAAGCAG AAGAAGTGGA ACGCATTGGT AAAGGAAAGA CAAGAGAAGG GACTAGGAAG GTCGACTAGG GGAACGGAGA AGTTGACAAG AGAGTTCGAA GAAGAGGCAG GGTTAGCTGC GGCCGCTACT CAAAGGGAGA AGAGCACCCC TGTGCCAGCG GAAGAAGGTA ATGGGATGGG TATAGATCAT GATAGAAGAG CGGTGCGCAG GAGCACACGA AATTCACTTG GAGGGGCATC TTCTGCGGTC AGCACTCCCA AATCTGCCCC AAGGCAAAGG AAAAGGGAGC CTGCGCAAGT GCCTGTGGCG GAAGAGCCTT CTAGATCAGC TCGCTCAACG TCCACCATTC TCCCGCCGAC TCGACAGCAA CGTGGTGTAA TAGGTCTTGA GGCTTTGCCT CTTCTTACTA CCAAAGAACG TTTGGAACAA GAGCGTGCTC TTGATCTCAC TACCACTGAG ATTGATGCAG CAGACCAGTT CAAGAGATTC AATGTGGGAT GGGTTCTGCC TGAAGGTACG AAAAGGAAAA GGAGCCAAAA TGCGACGAGC GGTGGTGCAA GTAGTACCAT CTCAAGAGCA CCAAACAATT CAACATCACG CGCAAGGGGT AAGAAAAATG AAGCAAGTCC ATCTGCAGCA CCGGCAACGT CTAAATCAAA GTCCAGGTCA AGGAAGGGCT CACACAATAT CAGCGTTATC CAAGAGGAAG AAGAGGGTGA GATTGAGGTT ACTACCCCCA AAAGGTCCGA TAAAGGCAAT GCCGTCGAGC CGGAGAACGG TGGTTTCATC GAGGCCGCCG ATGACGACAG CGACCTTTCA CCCCCTCCTA CAAGTTTGCC TGGATCGGCA GCTCCAAGTC CAAGAGCAAC GAGCAGCATC GCTAAGCCAG CTGATGCACA TGGATCCGAC ATCGAAAATG ATGCAAGGAG CGATGACGAA GATCAATTGC AAACTGAAAA AAAGAAGCCG GATCTGGAAG GGCAAGGAGA TCAAGAGACA ATCTCGCACG GCACCAAACG AAAGGGCGAA AGTGATATCG AAACTCCTGT CAGAGAGAAG AAAAGATCGA AAACCACACA GGCTAAAGAG GAGAAGGTGG CAAAAACACC ACCAAAAGGA AAAGGGAGGG TCAAAGCCCT TTATCCACCT GGAACATTAG GTATGTCCTT CTCCACTGAA TTGTTCAGGA TCCGCTAATG CTGTCGCTTG CTCTTTCCAG TCTGGGCTAA AAGTAAGCTG GTTTGCTCAA CCATTAAAAG GCGTTTGCTG ATTGATCACA TCTTTAGTCC ACACATTCCC CTTTTTCCCT GCCGAAATTG TCGATCTAAT TGACGATCGC GATGAAGTCC CTGACGCGGT GCTGAAGGAG GAGACTGCCT CTCGCGCGGC TGCCAAAAAT GTGAATAAGG ACGTATGGCT CGTGAGATTC TTTGACGCGA GATCGAGTTA CGGGTGGATA ACTGGAGACA GGCTGGACGA GCTTGGAGAG GACGAAAATG TTGACGCCAT GTATCTGGCG GGCAAGGACA GAGAAGGGAA GAGTAAAGGG TTTAAGACAC CTAGCCTGAA GAGGGCTTGT AGGAAGGGCT ATCGGTAAGT TGGCTTCGGG CTGCATAAAT GGTAAATGTA CTGATCCGAT TTGCCCAGTG ATGCTCTAAA TAGCATGGAA ACCAGTGCAA ACGAAGGTGG GAGGAAAGAG AAATAAATTA AATATCTATC ATGTAATAAT GTCAGAGTAT GTTTTACAAA CTCCCAGACT TCATTGTACT TCTAGTGTCA CATATGCATC TCATAATAGG
|
Protein sequence | MPLHDLPKVS FTLITDDPAL LHPAGVQSEQ SRSYGYNDFS DFERPEHYIR YIEPIESELA VQVEYDMDEQ DQAWLDTYNA ERKKDQCGPI SYEVFEIIMD KLEKEWFNLS KRIPQPQQQL APEDSKCSIC DDGEGENSNA IVFCDGCNLA VHQDCYGVPY IPEGQWLCRK CTVSPENPVS CIFCPNEGGA FKQTTTGHWA HLLCAIWIPE TTLGNSIYME PVESVELVPK GRWKLVCSLC KERVGACIQC ENRNCFTAFH VTCARQLGLL KSMKSLTTDG TLHAYCHKHM PLDESKDQEV EDEEEEDDGW EVSPRNHHAH AKTKSKTQSS KSRTSKSHPT PTAKRPAQPL VIPVTKKSAQ AHSKSFRPGP PIIPKMIVNR ILEYVGKVQL RKKPQVVEKI CRYWSLKREA RRGAPLLKRL HLEPWTASTA ARTQTESEKA QKLKFLQMLR NDLEKVRMLA DLVRKREKEK LRQAQVIKDV IDRFIFPYSE RLRVTLERIS AMDRREMFLN PVTPAEAPDY SDIVKEPMCW LYIDEKLEKN AYIDIADFKR DIMLVLDNAM LYNARDTPFH RAASKLKTAA QPLLNELDSI TASHQSTSTE SLVPSDLPVG DLEPALPHIL AFFQETTVSS QPEEPQDLLT SLFATELEPP KPPTPTPSPP PQPRKYRRPT KEEKQKKWNA LVKERQEKGL GRSTRGTEKL TREFEEEAGK REPAQVPVAE EPSRSARSTS TILPPTRQQR GVIGLEALPL LTTKERLEQE RALDLTTTEI DAADQFKRFN VGWVLPEEEE EGEIEVTTPK RSDKGNAVEP ENGGFIEAAD DDSDLSPPPT SLPGSAAPSP RATSSIAKPA DAHGSDIEND ARSDDEDQLQ TEKKKPDLEG QGDQETISHG TKRKGESDIE TPVREKKRSK TTQAKEEKVA KTPPKGKGRV KALYPPGTLV WAKIHTFPFF PAEIVDLIDD RDEVPDAVLK EETASRAAAK NVNKDVWLVR FFDARSSYGW ITGDRLDELG EDENVDAMYL AGKDREGKSK GFKTPSLKRA CRKGYRDALN SMETSANEGG RKEK
|
| |