| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF01550 |
|---|
| Symbol | |
|---|
| ID | 3258284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | + |
|---|
| Start bp | 457964 |
|---|
| End bp | 460873 |
|---|
| Gene Length | 2910 bp |
|---|
| Protein Length | 788 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638257280 |
|---|
| Product | ATP dependent DNA helicase, putative |
|---|
| Protein accession | XP_571487 |
|---|
| Protein GI | 58268662 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCCACACGCC CAAGCATCCA CAGCACAGCA GCTGGTTTAC GACGTCAAAA CCGGCCAGAG
CGACCGTATC CATCCTATAA ACACCTTTTG AAGCGAGAAA ATCGGTTGCC AAGATGGCGA
CCAACGATGC CGGTGCCAGT GTTATGCCCG TAGCCAACGT GCAGGTATGT CGCGTCGCTG
TTGATGTGCA TAGAACGCAT CATCGCTGAT ATGTTTTGAA ATGGTGTAGA TCAACTATGA
GGAAGAATCT GGTGAGTTCA GCTGGCTCTG TACGGTCCTC AAGCAGTTTA CTGACGCGTC
CACAGCCAAG ATTGAAGACT TCCTTGCGAG ATATGTCGCT GGACCTCGAC CGCGTCGCGA
TCAAAGCGCA CTCCCCGCGG ATGACGACTC AGCTGCCGAG GACGCTTCTG AAGATGAGGA
TGATTTGGCC GATGGGATGG GCGGGCTGAA CGTTCGAGGC GCTGGAAGGA CAAAGTTCAA
GTATTTGAGG ATGTTGAGAG AGGTTGCCAA CAGAAGACGA GAGGATATTG TCATTGATCT
AAAGGATCTC AAGAGGGTAG GTAAACGTGA TGACCTACTG TGAAAAGATC GAATCCATAC
TGACGGGTAT CGTAACCCAA TAGCACAGTA ATGACCTCTC ACTCCTTCAC AACATCCAAA
ACAACACGCG TCGCTACATT CAGCTCTTCT CGGACGTGAT CGACAAAATC ATGCCTCCGC
CGGATAACGA GGTCGACTAT ACCGATGATG TGCTCGACTT GATTATGCAG CAACGACGGG
AAATGAACGC TCAAGTTGAG GCGGGAGAAA GGAATGCAGA CGCCGGAATG TTCCCACCAG
AGCTGATGAG AAGATAGTAA GCACTTGCTC TAAGCTGATA AGGAAACGTC CTAACGGGAA
CAGCAATGTA TACTTCCGCC CGCTTCGATC TGACGACGTC CTTGCTGTTC GAGCAGTTCG
AGGTGCCCAT CTCGGCAAGC TCATCACCGT GCGAGGTATC GTTACCCGTG TTTCTGAAGT
CAAGCCCCTC CTCATCGTCA ACGCCTACAC CTGTGACTCG TGTGGTAACG AAATCTTCCA
AGAGATCACC CAAAAACATT TCGCCCCTCT CACTGTTTGC CCCTCTGACG TCTGTGTCAG
GAATCAAACC AACGGTCAAT TGCACATGCA AACTCGAGCT AGTCGATTCA GGCCCTTCCA
AGAGGTCAAA ATCCAAGAAA TGGCCGACCA GGTTCCTGTG GGTCACATCC CTCGGTCGAT
GACTATCCAT CTGTACGGTG CTCTTACTCG ATCTGTCAAC CCTGGAGACG TCGTGCACAT
TGGAGGTATC TTCATCCCAA CTCCTTACAC CGGTATGCGA GCTCTCCGAG CAGGTCTTTT
GCAAGACACT TTCCTCGAAG CAATGCATGT TCACCAGCTC AAAAAGCAAT ACCATGCCAT
GGAGTCTACC CCCGAAATCC AGGAGGCTAT CGCTGACCTC AAGTCCGATC CTGCCCTCTA
CGCGCGACTT GCCAACTCTA TCGCGCCCGA GATTTACGGT CACGAAGACG TTAAAAAAGC
ATTGTTGCTT TTGCTTGTCG GTGGTGTTAC AAACTCGAGG AAGGACGGCA TGAAGATCAG
AGGTGATATT AATGTTTGTC TGATGGGTGA CCCTGGTGTT GCCAAATCTC AATTACTCAA
ATATATCACA AAGGTGGCCC CTAGAGGTGT TTACACTACC GGTAGGGGTT CCAGTGGCGT
CGGTTTGACA GCCGCGGTTA TGAGGGATCC TGTTACTGAC GAGATGGTGT TGGGTAAGTT
CACACTAGGA AAAAGGAATC TGGCTGACAG TGATGCAGAG GGAGGTGCTC TTGTTCTCGC
CGACAACGGT ATCTGCTGTA TCGATGAATT TGACAAGATG GAGGAATCTG ACCGTACCGC
CATTCACGAA GTCATGGAAC AACAAACCAT CTCCATTTCC AAGGCTGGTA TCACCACCAC
TCTTAACGCG CGTACTTCCA TCCTTGCCGC CGCGAACCCC CTTTACGGAC GATACAATCC
CAAAATCTCT CCGGTTGAGA ACATTAATCT TCCTGCAGCT CTCTTGTCTC GTTTCGACGT
TCTCTTCCTT ATCCTTGATT CTCCTACAAG GGAAGATGAT GAGCGATTAG CCCAACACGT
ATGCTTTGTC CACATGCACA ACACCCACCC TGAACTCGAC TTTGAGCCCG TCGAGCCTAC
ATTGATGAGA CACTACATTG CCGAGTGCCG AAAGATTGAA CCTCGTGTTC CTCAGGCCTT
GTCAGAATAC ATTGTTTCCA GCTACGTACA GATGCGCAAA CAACAACAAG AAGATGAAGC
AGAGGAGAAG TCTCACTCTT ATGTTTCTGC CCGTACCCTT CTTGCCGTCT TACGTCTGTC
ACAGGCGCTT GCTCGTCTGC GACATGACGA TATTGTCCAG CAAGGCGATG TGGACGAAGC
TCTCCGATTG ATGGATGTCT CCAAGGCGAG CTTGTACGAA CACTCTCAAC AGAGGAATGG
CGAAGATCAG ACAAGCACAA GTAAGATCTT CAGGATTATC AAGGACATGG CACAGAGGGC
TGCGGATGAG GACGATGACG AAGAAATGGG AGAATTGGCG ATGATGGATG TGAGGAACAG
GGTTATTGCC AAGGGTTTCA CGGAGATGCA GTTAATGGAG ACTATCCTCG AAGTAAGTTT
CTATCGATGC TTTTTCAGTT CTATCAAGCT GACGCCGGTT GTACAGTACG AGAACATGGA
CGTGTTGATG CGTACCGCCA ACGGCTCCAG ATTGCAATTT GTTACTGTCT AATTTTCGGC
ATTGTAGATG ACAGGTGTTT ACGAATAGGT CATGGTTTTG TTCTTTTTGG GGATATATAC
CCGGCTATAA CGCCATTGTT TTTTGTCCCA
|
|---|
| Protein sequence | MATNDAGASV MPVANVQINY EEESAKIEDF LARYVAGPRP RRDQSALPAD DDSAAEDASE
DEDDLADGMG GLNVRGAGRT KFKYLRMLRE VANRRREDIV IDLKDLKRHS NDLSLLHNIQ
NNTRRYIQLF SDVIDKIMPP PDNEVDYTDD VLDLIMQQRR EMNAQVEAGE RNADAGMFPP
ELMRRYNVYF RPLRSDDVLA VRAVRGAHLG KLITVRGIVT RVSEVKPLLI VNAYTCDSCG
NEIFQEITQK HFAPLTVCPS DVCVRNQTNG QLHMQTRASR FRPFQEVKIQ EMADQVPVGH
IPRSMTIHLY GALTRSVNPG DVVHIGGIFI PTPYTGMRAL RAGLLQDTFL EAMHVHQLKK
QYHAMESTPE IQEAIADLKS DPALYARLAN SIAPEIYGHE DVKKALLLLL VGGVTNSRKD
GMKIRGDINV CLMGDPGVAK SQLLKYITKV APRGVYTTGR GSSGVGLTAA VMRDPVTDEM
VLEGGALVLA DNGICCIDEF DKMEESDRTA IHEVMEQQTI SISKAGITTT LNARTSILAA
ANPLYGRYNP KISPVENINL PAALLSRFDV LFLILDSPTR EDDERLAQHV CFVHMHNTHP
ELDFEPVEPT LMRHYIAECR KIEPRVPQAL SEYIVSSYVQ MRKQQQEDEA EEKSHSYVSA
RTLLAVLRLS QALARLRHDD IVQQGDVDEA LRLMDVSKAS LYEHSQQRNG EDQTSTSKIF
RIIKDMAQRA ADEDDDEEMG ELAMMDVRNR VIAKGFTEMQ LMETILEYEN MDVLMRTANG
SRLQFVTV
|
|---|
| |