| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF01250 |
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| Symbol | |
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| ID | 3258217 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 374603 |
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| End bp | 377065 |
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| Gene Length | 2463 bp |
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| Protein Length | 651 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 638257249 |
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| Product | rRNA primary transcript binding protein, putative |
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| Protein accession | XP_571552 |
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| Protein GI | 58268792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | [TIGR01642] U2 snRNP auxilliary factor, large subunit, splicing factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATTCAGGAAA GAAAAAGCGC CATCATGGAC GCAGGATACG GTAAGTATGG CCAGGGTAGA
GAACTGTCTG GTGCTCAATG AGCTGACTAT GGCTGGGATG TTTGTTATAG ACGCCCTCGA
GGAGGCTGCC TCTTCCTACG CCAAAAACAG AGACCGCGCG GACGACAGTA CGTCTATATC
TTCTTTTACC ATCGTCATAG CATCCTGACC CATACCTCTA TAATAGCTCG TAGCCACAGG
AGCCACAAAG ACAGAGATTA CGAACGGGAA GACCGAGACC CTGAACGTAG ACATCGTCGA
GATGACAAGG ACGACCGCTA CCGCGAGAGA GATCGAGACG CTTACAGGGG AGAACGCGAC
CTTGGGAGGG AAAGGGATTA CCGACCTCGA GACCGTGAGC GAGAGAGGGA GAGGGGTTAT
GAAGCGAGAG ACCGATACGA CCGGTACGAA CGTGGTGATG GTCGAGGCGC CGGCGGTTTT
GAAGAACGAC CCCCTCGTCG TCGACGAAGG GACGAAGAGG AGTTGACCCT CGCTGCTGAG
CCTATGCACG GACATCGTGA CAGGAGGCCA AGGTATGATG AACCTCCCGA GTTTGCGGAG
CCCATGAGGG GGAACTGGTC GCCCCCCAGG AGGAGAAGGG ATGATGGATT CCGTGGCGGA
AGAGGGGATA GGGATGGAGG CAGGCGAGGT GGCGGCGGTG GTGGTGGTGG TGGTGGCGGT
GGTGGACGAT TCTACGAGGA CAGAAGGAGC CCAACACCGG ACGGAACAAT GTCGCTTGAG
GAGAGGAAGG AGAAGTTGAG TAGGTCGCTT TGGGACACTG CTCCTGTACA GTTCCAGGGT
ATCAGCGCCC TCGAGGCCAA GACGACTGGT AAGTGGTATG CCTTCATCGT TGTATGTTGT
CCAATTTGAC AAATAAATAA AAGGTTTGTT TACCTATGGT CCCGGTCGAG TTCCTCCTCC
TGCCCATCTC GGCATCCCTG CCACTTTTGT TGCTGGTGCC TTTCCTCCCA GTAACCCTGT
CCGACAGAAC AACCGTTTGT ACATTGGTGG TATCAAAGAG GACATGCAAG AGCAGCAAAT
TCAGGATTTC TTCAACAATC TCATGAAGGA GAAGGGTATG GCCGATGGCA AGGAAGATCC
CGTCAAGCAA TGTCAAATTA ACAACGACAG GAACTTTGCC TTCATCGAGG TATGTGGGAT
TCTTTTCGTC TCTCCAACTG CGCTGACCGG TTGAAAACAG TTGCACACTC CTGAACAAGC
CACTGCCGCA CTTGAACTTG ACGGTGTCGT CCTCGACGGC GCTTCTCTCC GAGTCCGGCG
ACCCAAGGAC TATGCTGGTA TCGACCCACT TTTGCAAACC TTTAATGGTG TCGTCGCTCC
CAGTGTTGCG GACTCACCAA ACAAGCTTTT CATTGGTGGT ATCCCTACCT ACCTCAATGA
CGAGCAAGTC ATGGAGTTGT TGAAGAGTTT CGGAGAACTA AAAAGTTTCA ACTTGGTCAA
GGAGAGTGCT GGTGTCTCCA AGGTTAGTAT ATCTCAATTG TGACATGAAC ACCATACTGA
TCATATACCA GGGCTTCGCT TTTGCCGAGT ACCTTGATCC TGAGGTTACA GACATGGCTA
TCCAAGGTCT CCATAACTTT TCTCTTGGTG ACCGCAACCT CGTTGTTCAG CGTGCGGCTG
TCGGCCGGAA CACCGGTGTT AACGCACCCA TACCAGGATC TGCCGCCTAC CTCAGTCAAG
CCAGTAAGCC CAGCTCTTCG TGCTTTATTC TATTATCAGC TAATGTCATT CCTTTTTATC
AGTCCCCCAT CTCATGCAAA ACAATGCCGA CGCTCCCTCC TCTCGTGTCA TGCTGTTGCT
CAATATGGTT ACTCCCGAAG AGCTCTACAA TGACGATGAT TACAACGATA TCATCGAAGA
TATCAATGAG GAGTGCAGCA AGTATGGTGA AATTGAGGGG GTCCGTATTC CCAGACCTGT
ACCCAAGTCC AAGAAGTGGG AGTCCACCGA GGCGGCTGCG GCGACAGCGG AGCGGAATAA
GAGGACAGAT GATGAGGCAG GTGTTGGTAG GGTGTATGTA ATGTACAAGG ATGTGGAAAG
TACCAAGAAG GCTATGAACG CCATTGGTGG AAGACAGTTT GCGGGAAGAA CGATTTTGGT
TGCCAATGTG CCAGAGGTGA GTCTTACAGC ATCATGTGAC TATTCTTGAT TTCATCACCG
CTGACTTGTA CAACAGGAAG AGTTCTTGGG TCCAGCTCCA CCTCCCCCAC CTCCTGAGGA
TGCTCCTGCT CCTGCGGAAA GCGATGCTCC CCCTCCCCCG CCTCCAGCGG ACTTGGACGC
TGCAGCAGAT GCTGCTCTTA AAGACATTAT GTCTGGAATC TAAAAGCCAC CCTTTATTCC
TCCCGAAAAC GAACCCTCGT ATGTCGCTAT ACAGATCCTG ATGCATTCTA TGATTCTGGT
TAT
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| Protein sequence | MDAGYDALEE AASSYAKNRD RADDTRSHRS HKDRDYERED RDPERRHRRD DKDDRYRERD
RDAYRGERDL GRERDYRPRD RERERERGYE ARDRYDRYER GDGRGAGGFE ERPPRRRRRD
EEELTLAAEP MHGHRDRRPR YDEPPEFAEP MRGNWSPPRR RRDDGFRGGR GDRDGGRRGG
GGGGGGGGGG GRFYEDRRSP TPDGTMSLEE RKEKLSRSLW DTAPVQFQGI SALEAKTTGL
FTYGPGRVPP PAHLGIPATF VAGAFPPSNP VRQNNRLYIG GIKEDMQEQQ IQDFFNNLMK
EKGMADGKED PVKQCQINND RNFAFIELHT PEQATAALEL DGVVLDGASL RVRRPKDYAG
IDPLLQTFNG VVAPSVADSP NKLFIGGIPT YLNDEQVMEL LKSFGELKSF NLVKESAGVS
KGFAFAEYLD PEVTDMAIQG LHNFSLGDRN LVVQRAAVGR NTGVNAPIPG SAAYLSQAIP
HLMQNNADAP SSRVMLLLNM VTPEELYNDD DYNDIIEDIN EECSKYGEIE GVRIPRPVPK
SKKWESTEAA AATAERNKRT DDEAGVGRVY VMYKDVESTK KAMNAIGGRQ FAGRTILVAN
VPEEEFLGPA PPPPPPEDAP APAESDAPPP PPPADLDAAA DAALKDIMSG I
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