| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF01050 |
|---|
| Symbol | |
|---|
| ID | 3258411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | + |
|---|
| Start bp | 320522 |
|---|
| End bp | 322222 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638257228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_571546 |
|---|
| Protein GI | 58268780 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCC TTACGCAGGC CCTCAAACGT GCCCAACAGA CCTATGCCAA CCGTAACCGC
AAGTCTTATG AGGCACATCA GGCTGCCTCT CGGCATCTTC CAGGTGGAAG CACTCGTTCG
TCAATTTTCA TTCACCCCTT CCCTCTGTGC ATTCAGAAGG GCCAAGGTGT GAAAATCACG
GATCTGGACG GACACGAATA TGTGGACTTG TGAGTAGTAA TATCACGTGG TAAAATACAA
TCGTCTCACT GATTTTTTCC TGCAGTGTGT CTGATTTCAC GAGCGGCATA TATGGAAAGA
GCCATCCTGT TCTTATAGAT GCTATCAAAG AGGCTCTCGA CAACGGACTT CAGGTCTGTA
TGCAATCAAT CAATCATTAT TGACATCACG TTAATGTGCT TGTAGCTCGG TGCTCACACC
CTTGCAGAAA CGACCCTCGC ATCTCATTTC ACATCCCGAT TTCCCTCCAT TGAACTCGTC
CGATTTGCCA ACTCTGGTAC AGAGGCTAAT ATTTTGGCGA TATCTACTGC TATCAAACAC
ACTGGTAGAA AGAAGGTGCT GGTTTTTGAA GGGGGGTATC ATGGGAGCGT CATGTCGCAT
TTTCATATGA AGGGAGGAGA TGGGGACGAT TTGAAGGTGC CCTTCGTAAG TTTTGAAGCC
TGCGGGGGCG AGGAACTTTT GTCTCACTTA TGCATAGGAT TTTGTGGTAT GCTCGTATAA
TGATCGCAAG GCAACCGACG CTCTCATATC TCAGCACCCA TCTGAAATAG GAGCTATCCT
TGTTGAACCC ATGCTTGGCG CTGGTGGATG TGTGAGCACA TTCTGCCTCT ATCCCCATCT
TGCTGAGATT TTTAGCCAAA AGCATTGATT AACTTAACTT ACAGATCCCC GGTGATCCTG
CATTCCTTCA ATTCCTCCGG GAGAAAGCTT CTTCGATCGG CGCCGTGCTC ATTTTCGATG
AAGTTCAAAC TGCTAGACTT TCGACTGGAG GGCGCCAAAA GATTCTGGGC ATCACACCCG
ACTTGACTAC CGTTGGCAAG TTCTTTGGTG GGGGTTTCGC CTTTGGAGCC TTTGGGGGGA
AGAAGGAAAT TATGGAGAAG TATGTGCCTC TTTCTCAAAG TTATCGCAGG ATAGGTCGAC
GAGTATGTCA CAATGCTGAT CAGCATATGG CAATAGATTT GACGCGAGGA AGGGAGGTGC
AATATCACAT GGAGGGACCT TCAACAACTC CCCGCTGACA ATGGTTGCCG GTGCCACAGC
GATGGAGAAG ATCTTGACTG AGGATGCGCT GAAGAACTTG AATAAGTTGG GTGATTGGAT
GAGAGAAGAG ATCAACAGGA TGTTCACAAG CGATGGATCG CCTTTCCTGG TAAGTCGAGT
GTCCTTCAGA AATATTGTTT CCTCTCGGCT CATGGGTTTC GTTTGTCAGA TGACTGGGCT
AGGTTCCATC AATCAATTCC ATTGCACTCT CTCATCAAAC CAAAATCAGG TTCTGGATCT
TCTTTTTTTC TACCTTCTTG AGAGGGGATT CTGGATAGCT CAGCGAGGAC TCGTCAGTCT
GAGTTTTGCC ATGACCAAGG AAGACGTGCA AAGGTTTATC GAGGCGGCAA TAGAAGCTAC
ACAAAAGGTG AAAGCAACGC TGAAGTAGAA AGTGCCGACG CGCAGTTCCA TATTTCTACA
TATCATACAT GACCAATGGT C
|
|---|
| Protein sequence | MTSLTQALKR AQQTYANRNR KSYEAHQAAS RHLPGGSTRS SIFIHPFPLC IQKGQGVKIT
DLDGHEYVDF VSDFTSGIYG KSHPVLIDAI KEALDNGLQL GAHTLAETTL ASHFTSRFPS
IELVRFANSG TEANILAIST AIKHTGRKKV LVFEGGYHGS VMSHFHMKGG DGDDLKVPFD
FVVCSYNDRK ATDALISQHP SEIGAILVEP MLGAGGCIPG DPAFLQFLRE KASSIGAVLI
FDEVQTARLS TGGRQKILGI TPDLTTVGKF FGGGFAFGAF GGKKEIMEKF DARKGGAISH
GGTFNNSPLT MVAGATAMEK ILTEDALKNL NKLGDWMREE INRMFTSDGS PFLVLDLLFF
YLLERGFWIA QRGLVSLSFA MTKEDVQRFI EAAIEATQKV KATLK
|
|---|
| |