Gene CNF00940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00940 
Symbol 
ID3258118 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp297756 
End bp299355 
Gene Length1600 bp 
Protein Length413 aa 
Translation table 
GC content53% 
IMG OID638257218 
Productstructural constituent of cytoskeleton, putative 
Protein accessionXP_571575 
Protein GI58268838 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCATCTGCT ATATATACGA GAGAGTAGAC TGCTAGTCCT CCCTCTTACC AACAATGTCT 
GCACCAGAAG TATTCCAGCT CTCCTTCGGC CCTCTAACCG GCGTAGCTTT CAGTCCAGAC
AGGACTCGTA TGTTTCTCTT ATTGATACCC CTTGTGCACA GCTCACACGC CCTTATAACA
GACGTTGCCG TCTCACCCAA CAACAACGAA GTCCATATTT ACCAGCGACA AGGTGCGGAA
TGGATTCACA AGGATACCCT TGCTGAGGTA TGTTTTTCTA TCGTACCTCG TAATAATCAT
TGTGTTGACA CGTGGACGCG CACACCTCAG CACGACAAGC TCATCACTGC CATCTCATGG
GCTCCCAACT CGAACCGTAT CGTCACCTGC TCCCAAGACC GTAACGCCTA CGTCTGGACT
CCTACTGAGT CTGGATGGAA ACCCGCCCTT GTCTTGCTGC GAATCAACCG CGCGGCGACG
TGTGTTAAGT GGAGTCCCAA CGAAGACAAG TTTGCTGTCG GAAGCGGTGC GAGAACAATT
GCGGTCTGTT ACTTTGATGA GGAGAACAAT TGGTGGGTAT CAAAGCATGT CAAGAAGCCT
TTGAGGTCGA CTGTCTTATC GATTGATTGG CACCCCAACA ATGTCTTGTT GGCCGCGGGC
ACTGCCGAGG CCAAGGCATA CGTTTTTTCC GCTTATATCA AGGGTGTTGA CTCGAAGTGA
GTGAGATTTC GTTCATGCTA TGCAACCGAA TGCTCACGTA TGACAGGCCC GAGCCTACAG
TTTGGGGTGA GAGGTTGCCG TTTGGCACCA TCTGTGGCGA GTTTATTTCT CCCGATGGCG
GTTGGGTTCA CAGCGTTGCG TTTTCGCCTT CCGGTAATAT CCTCGCCTAT GTTTGTAAGT
TAATCTTGCC AAAATAAAAG TAAATGATTC TAATATCCTC TCAGCCCACG ACTCTTCCCT
CTCAATCGTC TATCCTTCCG GCCCAGGTGC TCCTCCCGCT GCTCACTTTG CCCTCCGTCT
CCCTTCACTT CCTTTCGTCG ACCTGACATT CACCTCTGAA TCCGCCCTCA TTGCCGCGGG
ACACGATTGC CAACCTATCG TCTTCACCGG CTCCGAATCC GGCTGGGTTC TTTCCCACTC
TCTTGATGAT CCTTCGTCCG GAGGTTCTCG TCCACTAACC CCGACCGCTA CCGGCTCTCG
TTCCGGCGGG GTCGGTAGGC TGGGCAACAA CGAAGCTTTC AACATGTTTA AGGCTGCCGA
CTCTAGGGGT CAGCGAGGCG TCCCCGCTCC CGGCGCAACT CCGACCAGTG CGGGTTTGAC
GCCTGTAGGC GCTGATGGGT TGTTGACGAC TGTGCACCAG AACACGATCA CTTGGGTTGA
GCCTTATGAG TGGGGACAGG GCGGAGAGGT TACCAAGGTT GGTACGGCGG GTAAGGATGG
GAGGTTGGTC GTTTGGCCCG TTACAGCTGC CAAGTCTGGT TTGGCGGGCA GGATGGCCGG
GTTGTCGGTG TAGAGCGAGA GCAGACTGTA TCCGACATTG AAAGGAAGTA AAAGGTTGTA
GATGCAAGTT GATACAAGGA ATGAAAGGTT AAATGGCTGT
 
Protein sequence
MSAPEVFQLS FGPLTGVAFS PDRTHVAVSP NNNEVHIYQR QGAEWIHKDT LAEHDKLITA 
ISWAPNSNRI VTCSQDRNAY VWTPTESGWK PALVLLRINR AATCVKWSPN EDKFAVGSGA
RTIAVCYFDE ENNWWVSKHV KKPLRSTVLS IDWHPNNVLL AAGTAEAKAY VFSAYIKGVD
SKPEPTVWGE RLPFGTICGE FISPDGGWVH SVAFSPSGNI LAYVSHDSSL SIVYPSGPGA
PPAAHFALRL PSLPFVDLTF TSESALIAAG HDCQPIVFTG SESGWVLSHS LDDPSSGGSR
PLTPTATGSR SGGVGRLGNN EAFNMFKAAD SRGQRGVPAP GATPTSAGLT PVGADGLLTT
VHQNTITWVE PYEWGQGGEV TKVGTAGKDG RLVVWPVTAA KSGLAGRMAG LSV