Gene CNF00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00870 
Symbol 
ID3258341 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp278311 
End bp279317 
Gene Length1007 bp 
Protein Length151 aa 
Translation table 
GC content48% 
IMG OID638257211 
Productconserved hypothetical protein 
Protein accessionXP_571495 
Protein GI58268678 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGG GTGAGTTTAC AAGTATATCC CAGCTGGGGC GTCGAAGAAC AAGGCGTCTC 
CGGTCCTAGA CATCGCAAGA CCTTGATCGC TCACTACAAA CCGATCGCTA ACCATCCCGT
CATGTTCTAG TCCCTCGTTC TTTCCGACTT CTCTCGGAGC TCGAACATGG TGAAAAGGGT
ATCGGAGACG GATCATGCTC CTATGGTCTC AAAGATGGCG ATGACATTGC CATGTACGAA
TGGAATGGGA CAATCTTGGG TCCTCCTCAC TCTGCGTTTG AGAACAGGAT TTTTAGCTTG
AGCATCTACT GTGGTGACAA CTACCCAGGT AAGCTATATC GCTTGTACTG GACTGGTTTG
GGCGACAAAT GAGGGGAAAT GAAAGACTAT GAAGGGCGAA AGACTGACGA TACGCAGATG
TTCCTCCTTT GGTCAAGTTC GAATCTAGGA TCAGTCTCCC ATGCGTTAAC CAACAAGGCT
TGGTTAGTGT TTTTCATACG TTCTTTATAC GACCAAGCCG TCAATACAAT AAAGATGCGA
CGCTAAAGAC AACGTTTGGA ACGATATCGC TGATGCTCGC GTGACAGGTT GACTTTTCCA
GAATCAACTC TATCTCCAAG TGGAACCGAA ATTTCACCCT TGAGACTGTT CTCGTCGAGT
TGAGACGGTA AGCCATAACC TTCTTGGTTT CATCGTGAAA ACTTCCGTTG TGCAAAGGAC
TGACATCGTC TTCTTGCAGA GACATGGCCT CTCCTGCTAA CCGCAAGTCC TCTCAGCCCC
CTGAAGGCGT CGACTTCCCA CCTCTTGATC TCCGTGCCCT TGCTCAACAG CGAGGCCTCT
AAATCTCCTA CACAAGCAAT ATTTTAAGCA AATGAGGCGT GTGATGGAGG AATGCCAAAG
AAGTAAGGAC GTTGGATGGA CTGTCAGAAG TGGGCTGTAG TCAGGTAGAG TTTCATGTTC
ATGTTGAGAT ACGGTACATC GGTATGCAGT CGGAGATCAT CACTGAG
 
Protein sequence
MAKVPRSFRL LSELEHGEKG IGDGSCSYGL KDGDDIAMYE WNGTILGPPH SAFENRIFSL 
SIYCGDNYPD VPPLVKFESR ISLPCVNQQG LVDFSRINSI SKWNRNFTLE TVLVELRRDM
ASPANRKSSQ PPEGVDFPPL DLRALAQQRG L