Gene CNE05000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE05000 
Symbol 
ID3257746 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand- 
Start bp1392127 
End bp1393250 
Gene Length1124 bp 
Protein Length251 aa 
Translation table 
GC content52% 
IMG OID638257083 
Producttriose-phosphate isomerase, putative 
Protein accessionXP_571026 
Protein GI58267740 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00881282 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACAACCAT ACACCTTTTC AGAAAACACA TATCCACCAT GGCTCGAAAG TTCTTTGTCG 
GGTGAGTTTC TGTTGTGGAA AAAAGAGAAA CAAGCGCGCT GACTTTTATC GGTAACAGCG 
GTAACTTTAA GATGAACGGC TCTCTCGAGT CTGTCGAGAA GATTGTCCGA TCCATCAACG 
ACGCCAACCT CGACGGCACC AACGAAGTCG TCATCGCCCC CCCTGCCTTG TACCTCCTCA 
AAGTCCAGTC CGAGCTCAAC GCGCCCACCC AAGTCTCTGC CCAGAACGCA TTCACCGAGT 
CGTCTGGTGC CTTTACCGGT GAGATTGCGC CCCAGCAGTT GAAGGATGCG AATGTGCACT 
GGGTGATTTT GGGGCATTCC GAGAGGAGGA GTTTGTTTGG GGATACGGAC AAGTTGGTCG 
CTGACAAGGT GAGTCGGGAA AAATGTCGAG CAGATATCTA CGCCCGCCCA CCACCCTGCG 
CTAACACTTT AACCCCCTTA CAGACCAAGG CCGCCATCAA CGCCGGCCTC TCCGTCATTG 
CCTGCATCGG CGAATCCCTC GAAGAACGCG AATCCGACAA GACCATGACC GTCGTTGAGC 
GTCAGCTTGA GGCTATCGCT GCTGCTATTG ACGTTGATGC TTGGAAACGG ATCGTCATTG 
CTTGTACGTC TTTTTCTTTT TCTTTTTCCT TTATCTCTAT ACCCACGCTA ACACCCCCTC 
TCTTACAGAC GAACCCGTCT GGGCTATTGG CACCGGCAAA GTCGCCACCG TCTCCCAAGC 
GCAAGAAGTC CACGCTGCCA TCCGCTCCTG GCTCTCTCGC CGCGCTTCCC CCGAGATTGC 
CGACTCGACC CGTATCATTT ACGGCGGTTC CGTCAATGGC AAGAACTGTG GCAAGTTGAG 
TGCGGCAAAG GATATTGATG GGTTCCTTGT CGGCGGAGCC AGTTTGAAAC CCGAGTTTAT 
CGATATCTGC AAGTCTGGCA AGAAGGCGTA AGGTCCCTAA TGCCGGATGC AGGGGAGGGA 
AGAGAAGAGA AAAAAAAAAG CATTTGGGTG TGGAAGAGAG GATAAAGAAG TAGATATGAA 
TACAAAGTAT GAACAGGAAA CCGGATGCAA CTTGTCCAAG TTTT
 
Protein sequence
MARKFFVGGN FKMNGSLESV EKIVRSINDA NLDGTNEVVI APPALYLLKV QSELNAPTQV 
SAQNAFTESS GAFTGEIAPQ QLKDANVHWV ILGHSERRSL FGDTDKLVAD KTKAAINAGL 
SVIACIGESL EERESDKTMT VVERQLEAIA AAIDVDAWKR IVIAYEPVWA IGTGKVATVS 
QAQEVHAAIR SWLSRRASPE IADSTRIIYG GSVNGKNCGK LSAAKDIDGF LVGGASLKPE 
FIDICKSGKK A