Gene CNE04960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE04960 
Symbol 
ID3257752 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp1384110 
End bp1385425 
Gene Length1316 bp 
Protein Length365 aa 
Translation table 
GC content50% 
IMG OID638257079 
Productintegral to membrane protein, putative 
Protein accessionXP_571018 
Protein GI58267724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.16182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCTGCAAAT AGATTAGATA GAACCTCAAA GGACTATCCT GTGGACAATT CCAATCCCTC 
GTCATGTCTG CACGGTCGCC CCGCTCGCCC AAAATGCCTC TGACCCAGGC TCCTGTCCCA
TTATCCCCAG TCACTCTCTC CCCAAAAAGA GGGAAATTGA CCTCATTCAC ATCAAGTCCA
GCTTCGCCAA CTGCTATTAC TCGTCGGCCA TCACCTGATA ATAATGCTTC TGTTCGATTG
CAAATGTTCT CAAGCTCTGT CGATGACTGG CTAACAGCAA AACTCCCCCC TGGACTTATC
TACTTCATCT CCCAAAATGT CGGCCTCGTC TTCGTAGCCA TCTCGGAATT ATTCTTCGTC
CTCATGGGTC TCACTGTCAA GTACTTTCTC TCCGCTACCC AAATATCCAC CACAACTTTG
ATCTTTGTCC GAATGGGCAT CACAGCCATC TGCTGCGTCC TATCCCTCTG GCTTATCAAG
CGCGACCCTA ACCCTCTCCT CGGCCCACCG GGCATACGCG GTATCCTCAT CCTGCGCGGT
TTCTTCGGCT TCATGGGTCT TCTGTCAAGC TATCAAAGCC TCAGAGGCCT TACCCTTTCC
GATTCTGTCA CAATCCAATT CCTCGCACCT AGCGTCACCG CCCTCTTAGG TTTCTTGTTC
CTGCACGAGA CACTCTCACA ACGTGAAATA CTGGCAGGCT TCTTCTGTCT GGTCGGCGTC
GTGCTCGTAA GCCGTCCGCC ATTCATCTTT GGCGGGGAAG GGAAAAGAGA AGATATCACT
TTACCAGGAG AAGGTGGAGG GACGAGGTTG GACTTGCCCC TGCCCCCTGG GGAAGGGGAT
CAAGAGGGAA ATGATACGAC CGAAAGAGCA ATAGCAGTGA CATGGGCTTT TGTTGCTGTT
TTCTTTGCGT CCATGGCTTG TAAGTACAAA GTATACTATC CCACACCAAA CCAAACCTAG
CTGGTGGTTA CGAAGAAAGG CTGATATGGA AAGTCAGATA CAACAATCAG GTGGATCGGA
AACAAAGCGC ACGCGCTTCA TTCCATCACC TACTTTTCTT ACACATGTAC TATCACCTGC
GGTCTGTAAG TTACTTCAAA AGGGATCTTG ACCTCAACTC GAAACTCTGC ATGAAAACTG
ACTACTCACC AATGGCTTCC AGATGGCTTC TATTTAAGCC CGGTCATATC GTATGGGTCT
CTTCCCTTCA CGAGCTTCTA TTCATCGTCA CCATCGGTGT ACGTCCCCTC CCTTCCCTTC
CCTCTTTCAG CCAGCTGACC AGTCACTCCT TCTTGATGCT TGATTTCCCT AAATAG
 
Protein sequence
MSARSPRSPK MPLTQAPVPL SPVTLSPKRG KLTSFTSSPA SPTAITRRPS PDNNASVRLQ 
MFSSSVDDWL TAKLPPGLIY FISQNVGLVF VAISELFFVL MGLTVKYFLS ATQISTTTLI
FVRMGITAIC CVLSLWLIKR DPNPLLGPPG IRGILILRGF FGFMGLLSSY QSLRGLTLSD
SVTIQFLAPS VTALLGFLFL HETLSQREIL AGFFCLVGVV LVSRPPFIFG GEGKREDITL
PGEGGGTRLD LPLPPGEGDQ EGNDTTERAI AVTWAFVAVF FASMAYTTIR WIGNKAHALH
SITYFSYTCT ITCGLWLLFK PGHIVWVSSL HELLFIVTIG VRPLPSLPSF SQLTSHSFLM
LDFPK