Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE04960 |
Symbol | |
ID | 3257752 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 1384110 |
End bp | 1385425 |
Gene Length | 1316 bp |
Protein Length | 365 aa |
Translation table | |
GC content | 50% |
IMG OID | 638257079 |
Product | integral to membrane protein, putative |
Protein accession | XP_571018 |
Protein GI | 58267724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.16182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCTGCAAAT AGATTAGATA GAACCTCAAA GGACTATCCT GTGGACAATT CCAATCCCTC GTCATGTCTG CACGGTCGCC CCGCTCGCCC AAAATGCCTC TGACCCAGGC TCCTGTCCCA TTATCCCCAG TCACTCTCTC CCCAAAAAGA GGGAAATTGA CCTCATTCAC ATCAAGTCCA GCTTCGCCAA CTGCTATTAC TCGTCGGCCA TCACCTGATA ATAATGCTTC TGTTCGATTG CAAATGTTCT CAAGCTCTGT CGATGACTGG CTAACAGCAA AACTCCCCCC TGGACTTATC TACTTCATCT CCCAAAATGT CGGCCTCGTC TTCGTAGCCA TCTCGGAATT ATTCTTCGTC CTCATGGGTC TCACTGTCAA GTACTTTCTC TCCGCTACCC AAATATCCAC CACAACTTTG ATCTTTGTCC GAATGGGCAT CACAGCCATC TGCTGCGTCC TATCCCTCTG GCTTATCAAG CGCGACCCTA ACCCTCTCCT CGGCCCACCG GGCATACGCG GTATCCTCAT CCTGCGCGGT TTCTTCGGCT TCATGGGTCT TCTGTCAAGC TATCAAAGCC TCAGAGGCCT TACCCTTTCC GATTCTGTCA CAATCCAATT CCTCGCACCT AGCGTCACCG CCCTCTTAGG TTTCTTGTTC CTGCACGAGA CACTCTCACA ACGTGAAATA CTGGCAGGCT TCTTCTGTCT GGTCGGCGTC GTGCTCGTAA GCCGTCCGCC ATTCATCTTT GGCGGGGAAG GGAAAAGAGA AGATATCACT TTACCAGGAG AAGGTGGAGG GACGAGGTTG GACTTGCCCC TGCCCCCTGG GGAAGGGGAT CAAGAGGGAA ATGATACGAC CGAAAGAGCA ATAGCAGTGA CATGGGCTTT TGTTGCTGTT TTCTTTGCGT CCATGGCTTG TAAGTACAAA GTATACTATC CCACACCAAA CCAAACCTAG CTGGTGGTTA CGAAGAAAGG CTGATATGGA AAGTCAGATA CAACAATCAG GTGGATCGGA AACAAAGCGC ACGCGCTTCA TTCCATCACC TACTTTTCTT ACACATGTAC TATCACCTGC GGTCTGTAAG TTACTTCAAA AGGGATCTTG ACCTCAACTC GAAACTCTGC ATGAAAACTG ACTACTCACC AATGGCTTCC AGATGGCTTC TATTTAAGCC CGGTCATATC GTATGGGTCT CTTCCCTTCA CGAGCTTCTA TTCATCGTCA CCATCGGTGT ACGTCCCCTC CCTTCCCTTC CCTCTTTCAG CCAGCTGACC AGTCACTCCT TCTTGATGCT TGATTTCCCT AAATAG
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Protein sequence | MSARSPRSPK MPLTQAPVPL SPVTLSPKRG KLTSFTSSPA SPTAITRRPS PDNNASVRLQ MFSSSVDDWL TAKLPPGLIY FISQNVGLVF VAISELFFVL MGLTVKYFLS ATQISTTTLI FVRMGITAIC CVLSLWLIKR DPNPLLGPPG IRGILILRGF FGFMGLLSSY QSLRGLTLSD SVTIQFLAPS VTALLGFLFL HETLSQREIL AGFFCLVGVV LVSRPPFIFG GEGKREDITL PGEGGGTRLD LPLPPGEGDQ EGNDTTERAI AVTWAFVAVF FASMAYTTIR WIGNKAHALH SITYFSYTCT ITCGLWLLFK PGHIVWVSSL HELLFIVTIG VRPLPSLPSF SQLTSHSFLM LDFPK
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