Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE04220 |
Symbol | |
ID | 3257995 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 1178360 |
End bp | 1179307 |
Gene Length | 948 bp |
Protein Length | 240 aa |
Translation table | |
GC content | 50% |
IMG OID | 638257004 |
Product | nonhistone protein 6, putative |
Protein accession | XP_571075 |
Protein GI | 58267838 |
COG category | [B] Chromatin structure and dynamics |
COG ID | [COG5648] Chromatin-associated proteins containing the HMG domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.219393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTC CTAGCTGGGA AGAAATGGAA GCCAAGCGAA TCGAGGTAAG CGCGCATCGT CTACTTTTGC AAAAACTACG GTGTTCATCT TTGAATAAAC AGATGATCCA GTCTCTTCGC GAAGTCTCTT CTGCCATGAC GCGCTGCGTC CATGTCATTG AAGAGTACAC CTCCCTCTCT CCCGTCAATC TCTCCAAGCC TGATCTCCTC CAACCTCTTA CTGCCGGTGG CCCTCTTGCC GTCGCTCTTG CCTCTGGATT GGCTGATGCC GGTGTCGGAG GTACTGGTAA GAAGGAGCGT AAGAAGAAGG AAAAGAAGAT CAGGGACCCC AACGCCCCCA AGAGGCCTCC TAGTGCCTAC ATCTTGTTCC AGAACGAAGT TCGTGATGAC ATTAGGACCT CAAACCCTGG AATGCCTTAC AAGGATGTGT TGCAAATAAT CTCTCAGAGG TGGAAAGAGT TGCCTGATAG CGAGAAGAAG GTAAGTTGAT TGTATGGATT TGGTAATTAA GAAAGTTTGG GCTGTCGCTG ATGATTCGTC TAGATTTTCG AGGACGCCTA TGCCGCCGCG CACAACAACT TCCGAGCTGA AGAGCAGGCG TATGCCAAGA AGGATGCCGT CGAGGTGGAC CCTGTTCTTA TGGAATCTTC CGACGACTCT TCTGACGATG ACTCCTCCGA AGGGGGCTCT GTAAGCTCGT CTCGCTGTCT TTGACTAAAG TATATGCTCA TCGTCGATGC AGACTCCCGC TGCTCCTATC CCTGCTCCTA CTCTTGCGGC CGCTGAGAAG AATAAAAAGG ACAAGAAGAG GAAGACCAAG GAGGAGGAAG CTGCTGTGAA CGCCGTGCTG GGTGAGAACA AAGACAAGAA GGTTAGTTAT CAATAACTGA AAAGTGTATT GTATGTGCTG ACACCGAGCT GCAGAAGAAG AAGAAGAGCA AGGATTAA
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Protein sequence | MSAPSWEEME AKRIEMIQSL REVSSAMTRC VHVIEEYTSL SPVNLSKPDL LQPLTAGGPL AVALASGLAD AGVGGTGKKE RKKKEKKIRD PNAPKRPPSA YILFQNEVRD DIRTSNPGMP YKDVLQIISQ RWKELPDSEK KIFEDAYAAA HNNFRAEEQA YAKKDAVEVD PVLMESSDDS SDDDSSEGGS TPAAPIPAPT LAAAEKNKKD KKRKTKEEEA AVNAVLGENK DKKKKKKSKD
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