Gene CNE04220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE04220 
Symbol 
ID3257995 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp1178360 
End bp1179307 
Gene Length948 bp 
Protein Length240 aa 
Translation table 
GC content50% 
IMG OID638257004 
Productnonhistone protein 6, putative 
Protein accessionXP_571075 
Protein GI58267838 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5648] Chromatin-associated proteins containing the HMG domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.219393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTC CTAGCTGGGA AGAAATGGAA GCCAAGCGAA TCGAGGTAAG CGCGCATCGT 
CTACTTTTGC AAAAACTACG GTGTTCATCT TTGAATAAAC AGATGATCCA GTCTCTTCGC
GAAGTCTCTT CTGCCATGAC GCGCTGCGTC CATGTCATTG AAGAGTACAC CTCCCTCTCT
CCCGTCAATC TCTCCAAGCC TGATCTCCTC CAACCTCTTA CTGCCGGTGG CCCTCTTGCC
GTCGCTCTTG CCTCTGGATT GGCTGATGCC GGTGTCGGAG GTACTGGTAA GAAGGAGCGT
AAGAAGAAGG AAAAGAAGAT CAGGGACCCC AACGCCCCCA AGAGGCCTCC TAGTGCCTAC
ATCTTGTTCC AGAACGAAGT TCGTGATGAC ATTAGGACCT CAAACCCTGG AATGCCTTAC
AAGGATGTGT TGCAAATAAT CTCTCAGAGG TGGAAAGAGT TGCCTGATAG CGAGAAGAAG
GTAAGTTGAT TGTATGGATT TGGTAATTAA GAAAGTTTGG GCTGTCGCTG ATGATTCGTC
TAGATTTTCG AGGACGCCTA TGCCGCCGCG CACAACAACT TCCGAGCTGA AGAGCAGGCG
TATGCCAAGA AGGATGCCGT CGAGGTGGAC CCTGTTCTTA TGGAATCTTC CGACGACTCT
TCTGACGATG ACTCCTCCGA AGGGGGCTCT GTAAGCTCGT CTCGCTGTCT TTGACTAAAG
TATATGCTCA TCGTCGATGC AGACTCCCGC TGCTCCTATC CCTGCTCCTA CTCTTGCGGC
CGCTGAGAAG AATAAAAAGG ACAAGAAGAG GAAGACCAAG GAGGAGGAAG CTGCTGTGAA
CGCCGTGCTG GGTGAGAACA AAGACAAGAA GGTTAGTTAT CAATAACTGA AAAGTGTATT
GTATGTGCTG ACACCGAGCT GCAGAAGAAG AAGAAGAGCA AGGATTAA
 
Protein sequence
MSAPSWEEME AKRIEMIQSL REVSSAMTRC VHVIEEYTSL SPVNLSKPDL LQPLTAGGPL 
AVALASGLAD AGVGGTGKKE RKKKEKKIRD PNAPKRPPSA YILFQNEVRD DIRTSNPGMP
YKDVLQIISQ RWKELPDSEK KIFEDAYAAA HNNFRAEEQA YAKKDAVEVD PVLMESSDDS
SDDDSSEGGS TPAAPIPAPT LAAAEKNKKD KKRKTKEEEA AVNAVLGENK DKKKKKKSKD