| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE04060 |
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| Symbol | |
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| ID | 3257987 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | - |
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| Start bp | 1145159 |
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| End bp | 1148140 |
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| Gene Length | 2982 bp |
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| Protein Length | 615 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638256989 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_571060 |
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| Protein GI | 58267808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | [TIGR01622] splicing factor, CC1-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.639663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAATATCTCA ATCTTCCTTC CTCACTCCTT AAACATTCTT AAAGACTTTT TATATCTAAT
TTTAGCGAAG TCCATAATAG ATGTCAGCAA CTCCACCTAG GTCTTCTTAC CAGTCTGCCA
ATGGTGGCGA CAAGACTCCT GAGCTCACCA CGTAAGTTGC CATCGTCTGT CTTTCGTCCC
CAGTCTCTGA CTGCTCTGTA CAGTAAACGT GAGAAACGCC ATCGTGAGGA TGATGAAGAT
GATCGTGACG TATCCGGCAG GTCTCATCGA TATCGTCCTG AAGACGTCCG CGACTACGAC
CGTGACAGAA GTGATAGGGG AGACAGGGAC CGGGACAGAG AGAGGCGACA CCGCCACCGA
CGCCGTGACG AAACTGAAGA GGAACGTAAG GAACGCCACC GTCGACGTGA GGAGGAGACC
GAGGAAGAAC GCGAGGAGAG GCATCGACGA AGGAGGGAGC GTGAATTGAG GGAACGCGAG
CGTGAACGAG AGGGCGAGGA CGATTATCGT CGAGGATCGA GAGAAATGTC TGTGGGTAGA
CCCTTGAGCC ATAGGGACAG ATCAAGAGAG AGTCACCGCA GTTATAGGAG CCATCGCGAC
AGGGACGAGA TGCCCCCCAT TAGGCCTATG AGTAGGGAGC CTAGGGACAT GGCAGAAGAG
CGTAGGGAAA ATGACAGGCG TAGGGAAATG CATTTTGCAG ACGTAAGTCC CCAAACATCC
TTATGCAGTA TCATACTAAT TGTCGTCGTA GCTTGAACGT GATGGTCGGA TGCGGTCTCC
GCCCCCACGA CGCCGTCGTC TTTCGCCCGA GTATGGGGGT CCTCGCGGTC CGCCTCCCCG
TCGTCCGCCT CCTCCCCCTC GTGACCCAGC TACGGCTTTG ATTGAAGAGG TAGACTCTGA
AGCTCGTTCC ATCTTTGTCT CACAACTTTC TGCTAGGATG ACTTCCCAGG TTCTCGGCCT
GTTCTTTGAA GACAAACTTG GCAGGGGTGC TGTTAGAGAC GCCAGAGTTG TGACCGACAA
GGTTGCTAGG AGGTCCAAAG GGTAAGTCTT CAGGTATATA TGCCTTGCAC AGTTGATGCT
GACATCTCAT AGTATCGGAT ACGTTGAGTT GGATAGCGTT GACCTCGTAA ACAAGGCTCT
TGCTGTAAGT CCAATGATTA GTCAATTAGA TATCCATCTG ACCTATTTAG CTTTCTGGGA
CGGTTGTCAT GGGTATTCCT ATTAATATCA TGCTTACCGA GGCAGAAAGA AACCATTCCG
GCACTGAACT TATCACTGCT ACTGCCCTTG CGAGCAACGC GTGAGTATAG ATTGAGTCCT
GCCAGTGGTA ACTGACTGAC TTTATACATA GGCGATCTCA TGGTGGTGGT GGTGGTCGTT
CTTCTGTTCC GTTCACTCAG AACTATCCTC CCCTCTCCAC CGGTCTGGCT CTTCCCCCAG
GTCTTGACCC CGACGCTCAC AAGGACGCTG CTATCCCTTA TCACCGTCTT TTCGTCTCCA
ATCTCGCTTT CTCTCTGACC GCTGATGATG TGAGGCAGGT GTTCGAGCCG TTCGGCGAGA
TTGAGTTTGT CGATCTTCAC ACGGATCTTG TAAGTTCATA TGGTTTGATT ACTTGTCAAG
GCCTAGCTGA TGTACGATTT AGAGCGGACT GAGGAAGGGT ACAGCTTACG TCCAGTTCAA
AGATGTCAAG TCTGCACAAA TGGCCCTTGA TGCGATGGCT GGATTTGACC TCGCAGGACG
TCTCATCAAG GTCCAGACTA TTCAAGAACG CGGTACTTAC CAGACACCAG ACTTGATCGA
AGATAGTGGC AACTATGGCA CCCGACTTGA CGCCAACCAG AGGCAACAGC TCATGTTTAA
GCTCGCCAGG ACCGAGCCCA ATGTCAACTT GTCGTTGTCC GCCCCCAAGA TTAACGGTTC
TCAGTAAGTG CACCGATATC CGTTTACTGG AGTCGAGTGT TGACGCCTGT GAATTAGGTC
CAAGATACCA GCGATGGACC CTACTCCTCG AATCGTTGTT CATAACATGT TTAATCCCGA
AGAAGAAACC GAGAGGAACT GGGATCTGGA CCTTGCCGAA GACGTCAAGG GCGAAGTTGA
GTCCAAGTAC GGCAGAGTCA AGAGGATTAA GGTCGAGAAG ATGTCTGCAG TATGTCGTTC
TGTTTCCCCA ATAAAGTAGC ATGTTCTGAT GTCGTTTTCT AGGGCGAGGT GTACATTGAA
TTCATTGACA CTGACTCCGC TATCAAAGCT GTCAAGGGCC TCAATGGTCG ATTCTTTGGT
GGACGCCAGT TGCAAGCAGG ATACATCACC GAGGCTTTGT TCAATGCGCA CCTCTAAACG
GTATGCAGCA AAGCATCGTT TCACGGATGT GTAGTATGGT GGAACAAAAA TATTCCTTTT
TTGTTTTCTG ATCTTTTGCT TAAAAGTATG GACCGTGTTA TTTATGGATC TTTGTGTTTA
CAGGTTATTT CCAACCCCAA CTCATATTGG GTTATAACGC CGATCGCCTA CAAAATACAA
ACTTCCATCC TCGATCCTCC TTCTCACCAT TCCGTGGCTG ATTCGACAAT CGTTGATGGT
AAATTATAGG CGAGTTATAT CCCCCACTTT TTTCAGTTGC TTTCCTTTTC TCGAAGTGAA
TCGCCTGTCT GGGATAAGTG GTCGTGTATG ACTTGCCTCC CTGCTGACTT GATACTGAAG
GCTTATATAA ATCGTCACAA ATCTGTGTAG CGAGAAGGAG GTGAGTGTGG CACACGTAAA
TCCCGTCATG CCATTCAGGT ATGGGCTTCC GGGTTGCATT TATTCTAGGC TCGACCCAAA
TCCCTCGACG GACATCGGCC GGTCTCCGAC GAGGTACGAA TGGTTTGTCG CAAGTTGCAA
CTACTTTTCT GTTCGTTGTC GGGGTGATTT TGGCCTTTTT TCGTTGGACC ATTTTCAAAC
GGTCATTTGA TTGACGGTAA CTGGAACACA TTGACTGACC CT
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| Protein sequence | MSATPPRSSY QSANGGDKTP ELTTKREKRH REDDEDDRDV SGRSHRYRPE DVRDYDRDRS
DRGDRDRDRE RRHRHRRRDE TEEERKERHR RREEETEEER EERHRRRRER ELRERERERE
GEDDYRRGSR EMSVGRPLSH RDRSRESHRS YRSHRDRDEM PPIRPMSREP RDMAEERREN
DRRREMHFAD LERDGRMRSP PPRRRRLSPE YGGPRGPPPR RPPPPPRDPA TALIEEVDSE
ARSIFVSQLS ARMTSQVLGL FFEDKLGRGA VRDARVVTDK VARRSKGIGY VELDSVDLVN
KALALSGTVV MGIPINIMLT EAERNHSGTE LITATALASN ARSHGGGGGR SSVPFTQNYP
PLSTGLALPP GLDPDAHKDA AIPYHRLFVS NLAFSLTADD VRQVFEPFGE IEFVDLHTDL
SGLRKGTAYV QFKDVKSAQM ALDAMAGFDL AGRLIKVQTI QERGTYQTPD LIEDSGNYGT
RLDANQRQQL MFKLARTEPN VNLSLSAPKI NGSQSKIPAM DPTPRIVVHN MFNPEEETER
NWDLDLAEDV KGEVESKYGR VKRIKVEKMS AGEVYIEFID TDSAIKAVKG LNGRFFGGRQ
LQAGYITEAL FNAHL
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