Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE03790 |
Symbol | |
ID | 3257842 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 1082377 |
End bp | 1086179 |
Gene Length | 3803 bp |
Protein Length | 897 aa |
Translation table | |
GC content | 49% |
IMG OID | 638256962 |
Product | voltage-gated chloride channel, putative |
Protein accession | XP_570966 |
Protein GI | 58267620 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATGACGCC GCTTTGTCAA GTCCTCGGCG TATCTCGACG TCTCGGGGAT TACATGTACC ACCTCAAACA GCGGCACCCC CTGTGGGTAA TCTGGGTTTA CCAACCCACG AGGCATACTA CTCGGTCAGT CAACCCGCCA GCGCGGCTAC ACCAAGGTTT AGAGATAAAG GGATTTATGC ATCTGGTGGA TCAGGAGGAC TGCAGCACTA TTCATCAAGC ATTGCCGGCT ATCCATCAGG ATCATACGGC GCCATTCACC AGAATCAGCC CTCTAGAGAC CTTGCACCCA CATCAGCGAT GGGTACTAGT ATGCACTCGC CTTTCCCGTC ACCCGAAGGG TCGGTTCTGA AAAGGTTGAA GAAGAAAGCT AGTAATGTTG GATTGGGTCT CGGAAGACCG GATAACTATG ACGATGAAGC AGTTGGGAGA AGAGGGGATG AGGATGAGTT GTTGGAGGAT AATGAAGGCG AACGGGCGAA TGGCACAAGA GTATGGTACA GCTCCTTTGC AACTATTGAT TGGATCCATG ACGCAGTAAG TATATCTTGC TTATGTTAAC TTTACATGCG GCTTACGCAA AACAGATCAA GGAATCGTCA CGAGTGAGGA GACTGAGGAA TGCCGCTTCA CGTTCTCTCC GCGGCAAGAT CGCAAATACA TGGGATCGCT TCCAAGGATG GCTTGTGGTT ACTCTCACCG GTATCATAAC CGCCCTTATC GCTTTCCTCA TCATCCGTGC GGAGATGGCA TTCTTTGATC TGAAAGAAGG GTTCTGTTCG ACATCCTGGG GCACCGCCAG ACGGTTTTGT TGTGCACCGA GGCACCAGTC ACCAGGAAGT GATGGAGGTG AGGACGAATG TTCAGACTGG ATTGAGTGGG GTCAGTTCTT CAACCCTAAA GAAAAAGATG GGCCATTTGG CGGCTGGGTG TATGGAGGAC CCGAATTCAT GGCCTATGCT ACTGTCGCAC TCTTGCTAGC GGTGACTGCC AGCTGTATGA CAGTTTATCT CTCTTCATCC GCTCACCATA CCACCTCGAA AGACTCTACA TTCCTCACTC CACCGTCTAA AATTCCAACA GCCAAACAGT CCACCGCTTC CTCCCCTACC AAACGTACCG CCTCTCTCCC GTACGGCCCT CATAACGAAT GTCAGCCCCT CCTCGATTCG GTCGCTAATG AACCTCCTAC ACCTTTGATC GAATCGCCTC CCGAAACCTT TCGTAAAGTC ATGTTCTACG CTGCTGGCTC TGGTATCCCC GAAATCAAGA CGATTTTGAG CGGGTTCGTC ATCCATGGAT ATCTTGGCGG ATGGACTCTG CTCACTAAGA GTGCGGGATT GGCGTTGTCC GTCGGGTCTG GTCTGTCATT GGGGAAGGAA GGACCATTAG TCCATATGAG TAGCTGTGTT GGCAATATCG TATCTAGAAT GTTTCTCAAA TTTGAATGTA ATGAAGGTGA GCTCTTTTCG CTTTTGGTAT GGTCAAGTAC ACAGCAGAGG CTAATGAAAA CGGCAGCCAA GCGAAGGGAA GTCCTTTCGG CTGCTTGTGC GGCTGGTGTA GCGGTGGCGT TCGGTGCACC CGTCGGTGGT GTCTTGTTCT CTCTGGAAGA AGTCTCCTAT TACTTTCCGC CCAAGGTCAT GTGGAGAAGG TAAGCAGAAT GCCGAACAGA ATGCGATCGA CGGATGACTG ACTGGACGGC AGTTTCTGGT GCGCTGCAAT TGCTGCAATC ACGCTCAAAG CATTGAATCC GTTTGGCAAC GGAAGCCTGG TACTGGTAAG TCCCTCAAAC TCGTCATCAT CAGAACTAGA CGCCGACTCG ATACCCAGTT TGCCGTGACG TACACCAAAG AGTACCACTA TTGGGAATAT ATCATCTTTG TAGTCCTTGG TGTCTTTGGC GTAAGTCTCA AACTCATTCA TCCTTTTCGT CAGACATACT GATGCTTCGG CGTAGGGTTT GTATGGTGCG GTCTTTGCTC GACTGAACAT TATCTGGAGC AGACATGTGC GGAATGGGAC TTGGCTGAGG AGACATCCCA TCTTTGAAGT TGTACTTGTG TGTATCAGGC TAATCATTCT CTTGAGATGG CAAGTCTAAC ATGGAGCACG CAGGTCGTGT TGTTGACAAC AATAGTGTCT TTCTCAAATC CATACACCAG AATGGGCGGC ACTGAATTTG TGGCCAGCGT GAGTCCTTCT AGTCCTAAAT CAAGGACAAA CCGGACTGAC TGTCTTCAAA GTTGTTTGAG GAATGCAATT CATCTTCTTC AAGCAGCCTC TGCGTCAACC ACCCTCATGA GCTCGCCACC GTGATCTGGG AAGTTTTCAT GGCCCTGATC ATTAAGGGCT GTTTGACGAT CATCACCTTT GGCATCAAGG TTCCAGGTTC GTGCCTCTTG AAATCTGCAA AGATAGCTTT ACGCTGACGG TTTTGTAATA AAGCTGGCAT TTTTATCCCC TCTCTCGCTG TTGGTGCTTG CTTTGGCAGA ATCGTTGGCC ATATGATGGA GTACATCGAA TTCACCTATC CTGAATTGTC AATCTTCAAC GTCTGCAAAG ACACTGATTG TATTGTACCC GGTGTTTATG CCATGGTAGG TCTTGCAAAT GCACGGAACA AAATAATATG CTGACACTGA GCGTTGCAGG TCGGAGCAGC AGCTACTTTG GCAGGCGTTA CACGCACGAC GGTGTCACTG GCTGTTATCA TGTTTGAACT CACGTCAACG CTCAATTATG TTGTGCCAGT GATGTTAAGT ATTTTGATTG CAAAGACCGT GGCAGACGGG TTGGAGAAGA AGGGTATTTA CGACTTGGTC ATTGAGTGAG TTCTAACCAC ATATCACATG GAAAGCAGGC TGACGAGGAA CGAAGCTTAA ACCAGTTGCC TTACCTTGAC TCGAAACATG AATACCTCTG GGGCTCTCGC CGCGCATATT CTGTAGCCGA TCGCTCTGTT CCTCATCTGC GCGCAGATAA ACCTCACACA GTGAGATCGC TCACCGGTAA ACTGCTTGAA CTCGTGCGTT TGGGTATGGA GGATACTGGA TTCCCTGTCT TGGTGAAGGA AATGACTAGT GCTGGAGGGC CAGGTACCAG TGCTGGTGTT GGATTGGAAG GGGGGATCGG TAGCGGGAGA GAAAGGAGCT GCCTTAGGGT GGTTGGGTTC TTGGGTATCA ATGAATTGGA ACATGCTCTT TGTAAGTAGG CTTCGTTGGA TGCGGAGATA GCTAGAGGCT GACATAGTGA CTATAGCTGA GCTAGCGGAT GAGCCTGATG CTGCGATCAA TCTCATTCCC GACGATGCTT CACAAGCGAG GGTACGCAGT AGTGCAATGT CAATCTTCAG CTTTGCCGAC TCGTTTGTCG ATAACGTGTG GAATCCATGC GACCTCAGTC GATACATCGA TCAAGTGAGT CTATCTTATA AATTTCTCTC CTAAAACACA AAGCTGATAG GCATACCAGG CGCCGATAAC TGTACAGATA CACTCTCCTC TTGAACTGGT GCAGCAGTTG TTTGTCAAAC TCGGAGTCAG GCAGGTCATC GTCGTGAACT CTCGGGGTGT GTTTCAGGGC ATAATCACCA AGAAGGCTTG GCTGAACTTC CTGAGCGAGT TGGAGGAAGG CACAGGACAT TGAAGTGTTC TTTATTTGTA ATCTATTAGT CATTTCGCTT AGAAAGCGTA GACTATCATT TTTTACGACT GTTTTTATGA CCGCCATTCT TGTTTCATGA CTAACGCATT GCGATGGGTG TATTCATTAT GTACATACAT ATCTCCATGC ATGTTTCGAC GTT
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Protein sequence | MGTSMHSPFP SPEGSVLKRL KKKASNVGLG LGRPDNYDDE AVGRRGDEDE LLEDNEGERA NGTRVWYSSF ATIDWIHDAI KESSRVRRLR NAASRSLRGK IANTWDRFQG WLVVTLTGII TALIAFLIIR AEMAFFDLKE GFCSTSWGTA RRFCCAPRHQ SPGSDGGEDE CSDWIEWGQF FNPKEKDGPF GGWVYGGPEF MAYATVALLL AVTASCMTVY LSSSAHHTTS KDSTFLTPPS KIPTAKQSTA SSPTKRTASL PYGPHNECQP LLDSVANEPP TPLIESPPET FRKVMFYAAG SGIPEIKTIL SGFVIHGYLG GWTLLTKSAG LALSVGSGLS LGKEGPLVHM SSCVGNIVSR MFLKFECNEA KRREVLSAAC AAGVAVAFGA PVGGVLFSLE EVSYYFPPKV MWRSFWCAAI AAITLKALNP FGNGSLVLFA VTYTKEYHYW EYIIFVVLGV FGGLYGAVFA RLNIIWSRHV RNGTWLRRHP IFEVVLVVLL TTIVSFSNPY TRMGGTEFVA SLFEECNSSS SSSLCVNHPH ELATVIWEVF MALIIKGCLT IITFGIKVPA GIFIPSLAVG ACFGRIVGHM MEYIEFTYPE LSIFNVCKDT DCIVPGVYAM VGAAATLAGV TRTTVSLAVI MFELTSTLNY VVPVMLSILI AKTVADGLEK KGIYDLVIDL NQLPYLDSKH EYLWGSRRAY SVADRSVPHL RADKPHTVRS LTGKLLELVR LGMEDTGFPV LVKEMTSAGG PGTSAGVGLE GGIGSGRERS CLRVVGFLGI NELEHALSEL ADEPDAAINL IPDDASQARV RSSAMSIFSF ADSFVDNVWN PCDLSRYIDQ APITVQIHSP LELVQQLFVK LGVRQVIVVN SRGVFQGIIT KKAWLNFLSE LEEGTGH
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