Gene CNE02840 details

Gene Information

• Locus tag: CNE02840
• ID: 3257682
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 750388
• End bp: 757338
• Gene Length: 6951 bp
• Protein Length: 1659 aa
• GC content: 45%
• IMG OID: 638256874
• Product: ATP-binding cassette (ABC) transporter, putative
• Protein accession: XP_570996
• Protein GI: 58267680
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.679539
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCCTTGTAA CTCTATTTTG ACCTCATTGA TCTTTCCTCC TTCTTCCTTC CCCCTATTAT 
CCTCAACCAC ATATACGGCA TAAACTAGGT CCCTTATTTA TTAAACCCAG GAAGGGCACC 
TCTTTCATCA TGTCCCATGT CCTGCCCATC GCCTCGACCG CCCTCATCCC TTTTACTACC 
CTCACTTCCT TCACCATCTA TCTCACCACC CATTCCTCCT CCCCCATCAA GCGTATTATC 
CGTCAGCAAG ACATTGCTTT GCCAGTCCAT AATGGGGAAG CTTTGGACGG CACTTTAGAT 
GACAAGGATG CGTTTGACAT TGACGACCCT GTCGTCTGCG AAGATGGAAC TCCTGTAGAA 
CCGCAGCAAT TTTGGATTTC GATGTGGAAG CGGAAGCTTG CTGTCATTGG CTTGATGATC 
CCTCCTCTCA TATGTAACGT CCTTCTTCTC ATTTTCAGTC TACTAGCTCC GTCAAATGAT 
GTTGAGAACC GACAAAGAAA TATCATTCTT CCAGCATTGC TTCTTCCTTC ACAAGCTGTT 
ACGTTGCTTG TCGGCTTCTG GCATTTATCT CAAAATGAAG TTTCATCACA TTGGCCAACA 
ACAATACATA ATGCCATTGA TATCTTCACT CAGTTTATCA TCCTCGCCTT CTTGGCTCTT 
CTGCCATCTA GCCCCTTACC GTCGTCGCCT GCATCACCCG AGGTGTTCGG AGCAGCACTT 
CCCAATACAT ACAGTTCTTC ACTGGCTTTC ATGAAAGCTC TTCTACCAGT CTTATACTTG 
CCTCCCCTGG TAGCGATTCT TTCGGTACGA CGAGGTCCTC CCCTTTATCT ACCTTTTGAC 
GCCATCTATC CCTCCAAAAT CGTCAGTTCA GTCCCTCCTG ACGCTCAGTC TCTCGATCCT 
CAAAAAGCCA ATGTCAGTCC GGAAGTGCAA GCAACCATTC CCGAATGGCT TTTATTTGGT 
TATGCGACCG ATGTAATTCG CAAGGGATAT GTTTCAGAAA GTTTGGATGT ATGGGATTTA 
CCTATTTTAC CGAGGACACT CCGTAAGGCT TTGTTTCATA AACGGGAATA TCAGTTTCTA 
ATCTTAAATG TCAACAGGGG CTTTATATCA ATATAAAAGA ATGAAGCGGG CCTACGGGAA 
GACCAAAGGA CGTCGTGGAC GAATGGAAGG TTTCAATCTT CTGCTCACTG TCGCCCGGGT 
TAACTCTGGA CTTCTTTGGG CTCGTAGGCA ACTCTTTTCA TTGATATACG GGAAAAATCT 
GACGCGATGG TGCTTCAGAA ACGTTGCTTG CAGCGGCGAC CGCTTTTGGG TATTATCTTC 
CTCACTATCT TCTGAAACTG TTCATCAACT TTTTGGAAAA CGATCCTGCG CGGGCTGAGC 
CCGCTTGGGG CTGGCTCCTG TGCTTCGGCC TTTTCACCTC CAATGCCCTC ATTTTTATAG 
CCTCTGGAGT CACATGGTCC ATTTGCACAA CTTATCTCCA GGGAAAAATC CGGCTTCAAC 
TCAATACTAT GTTGTTCAAG AAAACTTTGT TGAAGAAGGA CATTGCTGCG AGTAGTGGTG 
ATAAAGGGCA AGTGGGTGGA GTGCAAGAAG AAGCGGCCAA GGATAAGAAG AAAAAGGAGG 
AAAATGGAGA GAGTAATGCA GAGGATGAAG AGACCGTTAC CTCAAAGACG CAAATTATGG 
TCGGTAATCC CTGTTCTACT GAGAAGCTTG CTTAACTGGT TGCAGACTCT GTTCACCGTC 
GACGTTGACA GGGTCACTGA ATTCGTTTTC CATCGTATGT TGGTCTGTTA CTGTGTCTGG 
CCAATCCCAA TTGCTGATAA TCTTATCCTA GTCTTCGCTG TTATTGATGC GCCTCTCGAA 
ATTGTCGTGT ATGTTAACTC ACTGGGCATC TATATTCTGA CTCACACTAC CTATCAGCGC 
GAGTGTCTTT GTCTTCAAGT TGTTGGACAT TTCGGCTATG TATGGTTTGC TTACAGCCAT 
TCGTAAGTGG GCTTTGAAGT GCCTTCTTGC CACATCAGAC TCACCCATAT TCAGTCTCTC 
TTCCTTTGAA CCATCTCGCA TCCAAGATTG TTGTTAGAGC TCAGGAAAAC CTCATGAAGA 
CACGAGACCA GAGAACAGCC CTGATGAACG AAATTCTTCA AGGTATCAGG ATGCTCAAGT 
CAGTTTTTTC TTCCTGGATA TCATGTCCAG AGCTCACGTT ACTCAATAGG TTCATGGCCT 
GGGAACGATC TTTTGAAAGC CGGGTTCAAA CAATCAGACG AAACGAACTT TCTTGGCAAG 
CAAGAAACTA CCAAATCGAA GTAGCGTTCA ACTGTATTTG GGCTTTGACG CCAGTGGTGG 
TCACTGTTGT CTCATTCTTG GTAAGTGTCA TGAGTGAAAC AGCATGAGCT TATGTCCATT 
ATCCACAGCA CTATACTCTT GTGAGGGGCC AACAGCTTAC ACCATCTGTT GCCTTTACTT 
CAGTAGCTGT CTTTGCCGAA TTGAGGTACG TGCAACTTTG ATATTCACAA TAACCAGTAA 
AAACTGATTG GTGATACAGA TATGCGTTGA ATGCCATGTA AGCATAGCCC CCCATTTAGT 
GACTTAATCT AATGATCAAT ATTAGCCCGG AAACTTTTAT ACAAGCCTTA CAAGGTTTCG 
TTTCTTGTCG ACGCATTGAA AAGTATCTAT GCCTTGACGA GGTCGCTGCC ATTGAAGAAA 
ACGATGGCGA AGGTGATATT GTGCTTTCCT CCGCAACCTT CACTTGGCCT CGGGATGAAA 
CTGCTTTTGA GAATGGACTC GTCATCGACG CGGTTTCTAA TGCGGCTACT CCCAAGACTG 
CATTCACTCT TGCTGATCTT AATCTTCGAT TTCCTAAGGG CAAGCTATCA CTGATCTGCG 
GAAGGCTAGG TAAGTTCACT GTTCGGTGAT AATAAACCTC GTATGCAGTA TATCTAACGG 
CATTGTCAAG GGTCCGGGAA GTCTCTTCTT TTGGCAGGTC TTCTTGGTGA GGCAGATCTC 
CTTACTGGAC ACGTCGTTTG CCCTCGCTCT GCACCCGATG CGATGAGTAA GGGATCGGCA 
AATCCATCAG AAGATCTCTG GATTGTACCG AACATGGTCG CCTATGTGCC CCAGCAAGCA 
TGGCTTCAAA ATGCGTCGAT CAAGGAAAAT ATTATCTTCT CATCACCTTG GGATGCAGAG 
AGATACCAGC AGGTAATTGA AGCATGTTCT CTGCTGAATG ACCTGGATAT TCTTGAAGAC 
GGAGACGAGA CGTAAGTCAC GACAATATGT AGAGGTTATG TCTTGTACAC TGAAACTATC 
AAAGCGAAGT AGGGGAGAAA GGCCTCAACC TCAGTGGTGG TCAAAAAGCA CGAGGTAAGG 
ATTTTTTTGG GTTGGGACTC TTACAGATTT CATGGAGTAA TGCCAATGTT ACTTTGCTGC 
AGTATCACTC GCCCGAGCCA TATACAGTCG GGCAGGTGTA CTTTTCCTTG ACGACGGTGA 
GTATTCTATT GAAAACCAAC CATGAATCGA ATTGACATGA TATTTAGTAC TTAGCGCCGT 
CGATGCCCAT ACAGCTCACG CAATTATGAC CAACTGTTTA CAAGGCCCCA TCGTAGAGGG 
TCGGACAATA CTTATCGTGT CTCATCACAC AGCTCTTGTT TCCCCAGCCG CCGCCTATAT 
AGTGGCCCTG GAAAATGTAG GTTCCGGTTT TTCCTTCACT ACCGTGGTCA TTTTTCTGAC 
TAAGCGATGT CAGGGCGACG TCAAATTTTC TGGTACTAGG GAAGAGTTTG TGGCCTCGAA 
TCTGAGTGAT GAACTGGATG AGGAAGATGC CCAAGCAAGG CCCACTGATT CTGAACAAAA 
GGAGGAGAAG ACAGTTGAAG AAAACTCTAT TCAACTCACA AATAAAAGCG TTCTTAATCT 
TAGCGGTGCA TGCGCTGAGA GTGCAGCGCC AGACTCTGAA ACTAGCTCTC TTGCTCCTGA 
GGATGACAAA ACCATAGTTA ACTCAAAGCA AAAAACTCCC CGGAAGCTCA TTGAAGACGA 
AAAGCGCGCA CGAGGCAGGA TAACCTGGAC AGTTTGGAAA ACATACTTCA GTGTAAGTAC 
CGATCCAGGT TGAAGGTGCA GAGTACTTGG ACTAACCCGT ATACAGGCTC TCGGTGGGCC 
TATATGGTGT AAGTAAAGAG ATTCCGTACA TTTGACGGGA TCTGACCACC TATCAGGGTC 
ATTGTTTATT TTGTCCCTGG GGATGGCAAT GCTTGTTCCG GTAGCGGAGA AGGGATGGCT 
AGGGTGAGCA CAGTACTCGC CATAATGAGA ATTGCTAATA GCAGAGCAGA TACTGGACTG 
GGTCAAGTTT ATCTTCTTCA GAGGGTGGTC ATACCACCCG TTATTATGTT ATGGGGTATT 
CTGTGGTAAG TCCATTGATC GAATCTTATA ATGAGATAAA CTGGTGATTG AAGTATAAAA 
TGATTGAAAT ATTGTTAGAT CACAATCGCA GGGGTATTTG CCTCCAACTT GCAGTACTGC 
ATAATATATT TCGGCTCGCT TCAAGCCAGC AGAAGACTTC ATAATTGTAC GTCTCTCTTG 
GGATACTCGT CAGCATTCAC TGACTATTTT TTAAGCTATG CTGAAATCAG TTTTGTTTTC 
AACTCTGCGC TTCCATGACA CAACAAGCCG AGGACGGCTA CTTAATCGTT TTGGTAAAGA 
TATCGAAGGG CTTGACTCCA GTACAGCAGA CAATTGTTGG TGTACTGTAT CATCATGTTC 
AACCTTATGC TAATGATGCC AATTAGTTGT GCGTAGTGCG GCATACGGCC TCAATGTCGT 
AGTCACATTC ATTTCCATCA CTTATGTGGG CGGTCTCCCT TTTGTCATTG CTGGATGGTC 
CGTTATTAAG ACAATCTCTT AGCAAAAAGT GCTGACGCCA ATTTAGTGTT GTATTGATTG 
TCTACTATCA AGCCGGGTCA ATTTACGGGC AAACTTCACG GGATATGCGG CGCTTAGACT 
CCGTGACCCG ATCGCCTTTG TACTCGCTAT TTGGAGAGAC TGTCTCTGGT GTTGCTGTTC 
TTCGTGCATT CGGTGCTAGT AAGTATACTA ACTAAGCATC GCTTTTTATG AAGTTAAAGG 
ATCTGTAGGT AACATGGCTT TGAAAAATAT GATGAAACTC GCGGACACGA ATCTTCTTGC 
TTTTGCCTGG TCTTGGTAAG GCAGATGTTG TTGTCTCGGT ATGATGCTGA TTTGATATCA 
GGACTGTTAA TCGCTGGTTG TCGGGTAAGT AGTAACAAAC TGGACTATGC AGTTACATAG 
CTGACTACAG GCTAGCGCGT TTCAATCTTC TAAGCGCGGT TTTGGTTGGT TTGACTGCAG 
TTGCCGTCCT TATCGCTCCA AATGTTGATG CGGCCATGGG CGGCTTTGCT CTGGCATTTG 
CGGGGACTAT ATGTCATGAT TTGCTTTTTG TTGTTAGGCG TTTCGTCCAG CTGGAGCAAA 
GTATGGTGGC GATTGAACGC TTGAAAGAGT AAGTTTTTTC CACTCATTTT GTAAAACGTA 
AACCAGCTTA CCGCTGGCAT CTTTTGTCAC TGTAGGTTTA CCGAGCTTCA ACAAGAAGCG 
CCGGAATATA TAGAACCTAG GCCTGCCGCT TCCTGGCCTG AACATGGATC TATTAAAGTC 
GAAAACCTCG TCGTTAAGTA CGCTGTAAGT ATGCCTCAAG CTCCTGCATT AGCTTTGATG 
CTCACTTGGG TCTGTAGCCT GACCTTCCTA GCGTCCTCCA TAATATTTCT TTTGAAGTGT 
CTCCTCGACA GAAGATTGGC ATTGTTGGTG CTACCGGTTG TGGCAAGTCC ACATTGGCTC 
TGAGCTTCTT CCGTTTTGTT GAGGCGGCGG AAGGTCGCAT TGAGATTGAT GGGGTAGACA 
TATCAAAAAT TGGATTGACT GATTTGCGAA GTCGAATGAC CATTATACCT CAAGACCCAA 
CAATTCTGTC GGGGACACTA CGCTCAACTC TCGATGTCTT TGACGAATAT GACGATGTCG 
ATATATACGC CGCACTCAGG AGAGTGCATT TGATCAAGGA TGAAAACCCA GTGACTTCTC 
TGGATGAGCA AAATGACGTG GAAAACAGGA ATAAAAATGT ATTTGAGGAC CTCTCGAATC 
CAGTCAGGTA AGTTAATCGT GTCGATTGTG TAAACCCTCC TTCTAATTAA GACATTAGCG 
AAGGAGGGGA CAACTTCTCA AGCGGTGAAA AGCAGCTCAT TTGGTGAGTA ATTCGGTGTA 
TTTTTCTTAT GTTGAGCGAC AAATGCCCCT GTTGAAGCTC TTGCTAATAC TTTTTTTTAG 
CATGGCTCGC GCAATACTCA AAAGAAACAA AATATTATTC ATGGACGAAG CGACTGCATC 
GATCGATTGT ACGTCTGATT TTCTACGTGA ACGACGCAAT GCTGATTTGC TTCTTCAATG 
CAGATGAAAC AGATGCATTA AGTAAGCTTG CAATTTTTTA CTTCATACAT AAAAAGTTGT 
CCTAATGTGA TACATTAGTC TCTAAGACAA TCAGAGAAGA GTTTTCGGAT TCGACCATCG 
TGACAATCGC TCATCGCATT CATACCATAG TAAGTAACGC GGGTTGCCCC TATTTCCCTC 
AGGCCAGCAA AAATTTGAAA GTCTGACCGA TATCTATCTA CAGATCGATT TTGACAAAGT 
ATTAGGTATG TAAAGTGACG CGGATGACGG CGGATTCTAA TACTGATAGA TATTACCAGT 
CATGGATCGA GGTAACATTG CTGAATTCGC CAGCCCAGCG GATCTTTTAC GGGACCACAA 
GTCTAGGTTT TATAGTGTAA GGTTTTACAT CAGTTTGGTT GTGCTGCTAC TATGAGATTG 
AGCTGACGTA TATTATGCTC TACATAGCTG TGCAAGGCTA CTGGCCGGAC AGAGTTCAAG 
AACCTCAAAG AGATGGCTTT GGAAGCGGAG CGTAAACGGA AATCGGTTTG A 

 

Protein sequence

MSHVLPIAST ALIPFTTLTS FTIYLTTHSS SPIKRIIRQQ DIALPVHNGE ALDGTLDDKD 
AFDIDDPVVC EDGTPVEPQQ FWISMWKRKL AVIGLMIPPL ICNVLLLIFS LLAPSNDVEN 
RQRNIILPAL LLPSQAVTLL VGFWHLSQNE VSSHWPTTIH NAIDIFTQFI ILAFLALLPS 
SPLPSSPASP EVFGAALPNT YSSSLAFMKA LLPVLYLPPL VAILSVRRGP PLYLPFDAIY 
PSKIVSSVPP DAQSLDPQKA NVSPEVQATI PEWLLFGYAT DVIRKGYVSE SLDVWDLPIL 
PRTLRALYQY KRMKRAYGKT KGRRGRMEGF NLLLTVARVN SGLLWAQTLL AAATAFGYYL 
PHYLLKLFIN FLENDPARAE PAWGWLLCFG LFTSNALIFI ASGVTWSICT TYLQGKIRLQ 
LNTMLFKKTL LKKDIAASSG DKGQVGGVQE EAAKDKKKKE ENGESNAEDE ETVTSKTQIM 
TLFTVDVDRV TEFVFHRMLV CYCVWPIPIA DNLILVFAVI DAPLEIVVAS VFVFKLLDIS 
AMYGLLTAIL SLPLNHLASK IVVRAQENLM KTRDQRTALM NEILQGIRML KFMAWERSFE 
SRVQTIRRNE LSWQARNYQI EVAFNCIWAL TPVVVTVVSF LHYTLVRGQQ LTPSVAFTSV 
AVFAELSPET FIQALQGFVS CRRIEKYLCL DEVAAIEEND GEGDIVLSSA TFTWPRDETA 
FENGLVIDAV SNAATPKTAF TLADLNLRFP KGKLSLICGR LGSGKSLLLA GLLGEADLLT 
GHVVCPRSAP DAMSKGSANP SEDLWIVPNM VAYVPQQAWL QNASIKENII FSSPWDAERY 
QQVIEACSLL NDLDILEDGD ETEVGEKGLN LSGGQKARVS LARAIYSRAG VLFLDDVLSA 
VDAHTAHAIM TNCLQGPIVE GRTILIVSHH TALVSPAAAY IVALENVGSG FSFTTVVIFL 
TKRCQGDVKF SGTREEFVAS NLSDELDEED AQARPTDSEQ KEEKTVEENS IQLTNKSVLN 
LSGACAESAA PDSETSSLAP EDDKTIVNSK QKTPRKLIED EKRARGRITW TVWKTYFSST 
WTNPYTGSRW AYMVVIVYFV PGDGNACSGS GEGMARILDW VKFIFFRGWS YHPLLCYGVF 
CAMLKSVLFS TLRFHDTTSR GRLLNRFGKD IEGLDSSTAD NFVRSAAYGL NVVVTFISIT 
YVGGLPFVIA GCVVLIVYYQ AGSIYGQTSR DMRRLDSVTR SPLYSLFGET VSGVAVLRAF 
GARSVGNMAL KNMMKLADTN LLAFAWSWTV NRWLSADYRL ARFNLLSAVL VGLTAVAVLI 
APNVDAAMGG FALAFAGTIC HDLLFVVRRF VQLEQSMVAI ERLKEFTELQ QEAPEYIEPR 
PAASWPEHGS IKVENLVVKY APDLPSVLHN ISFEVSPRQK IGIVGATGCG KSTLALSFFR 
FVEAAEGRIE IDGVDISKIG LTDLRSRMTI IPQDPTILSG TLRSTLDVFD EYDDVDIYAA 
LRRVHLIKDE NPVTSLDEQN DVENRNKNVF EDLSNPVSEG GDNFSSGEKQ LICMARAILK 
RNKILFMDEA TASIDFSKTI REEFSDSTIV TIAHRIHTII DFDKVLVMDR GNIAEFASPA 
DLLRDHKSRF YSLCKATGRT EFKNLKEMAL EAERKRKSV