| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE02430 |
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| Symbol | |
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| ID | 3258001 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | + |
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| Start bp | 650411 |
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| End bp | 655408 |
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| Gene Length | 4998 bp |
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| Protein Length | 1261 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638256834 |
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| Product | pre-mRNA splicing factor, putative |
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| Protein accession | XP_570944 |
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| Protein GI | 58267576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.424858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGAA TCATGAACCA GGTCAACCCA AATGACCTCC TTGGTAAACG AATAGTGGAT
ATCGCAAAAG GCAACCGTAC TGGCGATGCA TTTCTTAGAG GTTTTTATTT CCCACTTCAT
ATCTCATCCC ATACTGAATT ACTGACATTC TCCTTAGCTG TTTCGACATT CGGCCAGTTT
CCTAGTGAAC CTATGCTATC TCTTCACACT CGTATTCTCG CCCACCTTTC AGTTCTCCAG
GGCCAAAACC AGTCAGGCGC TCGTAGACGA TCTGAGCATT CCCCACCTAG GATGCTTGGT
GGTCGACCCG TTGGAGAAAA TGTGGAGGGC ATGGATCACG ACGACACCGA TACATTAGCG
CCCGAGCCTG TAAGGAAAGG TGGCTTAAGA AGAGCTGATA ACGTAAGTTG CACCTCATTC
GAGAGTAAAT GTTGGTGACT AAATTTCAAT TCAGGCACCG AAATTTAAGG CTCCCGCTAC
AGCTCGACCG TCACTACTGG GACTGGACAA GTTAGCCGCT GAGAAACGTG CAGCAGCGGC
CGCCACTGCA GACAGAAATG GTCCGCCGTC CAAAAAGGCT CGAAAAGATG AAGGAAATGA
AGATGACGAA CAATCAGGCG GTGTCTTCAA AGGTTGGTTG TTGCTTGCCT TTTGGGCTTT
ATGATCACTG ACGCCTACCC TACTTAGTGC CCACCATTCC GATTCGAAGG GATAATGTCC
GGGTGCGACC CGAGGAAACA CCCAGTCGAG GATCTGGCCT GTCAGAAGAG GCTCGCGCTC
GGCTCGAAGC TCGTCGTAGG GAACGCAATC AACCTAGTAC GGGCATTAGC GCGAGCACTG
CCGATCGCGA GCATTCAAGG GAGGGCCTAG GGGATTTCCA GAGGAGGGCG AACAGAGATA
GATGGAATGA ACGAGGTGGG GAGAGAGAGC CAGGACAGGG AGAATACAGT AGAGATGGAC
GGGGAGGCGG GAATGACTGG GGCAGAAGAC AAAATGGTCG AGACGGCAAA CCGTGGAATG
CAGCACCGAC ACCTCGCACC TCTCGTGCAG ACAGAGATTT TGATGGTGGT AGTGCCCGTA
TCCCCAATCG GGGCTGGGAC GAAACTCCAC GCGGATCGCG CGGTCCAGGC GGATGGGGCA
AAGGGGAACG CACATCCAGA GGTTGGGACC AGACTCCGAG ATCGGCTAGA GAATCACCGG
AAGGGGGCGG GTTGGATCTC AACGCTAAAG AATGGGAAGA AGAGCAAGTC AAGCTGGATC
GAGACTGGTA TAGTTACGAT GATGAAGGGG CAGTGGTAAG TACTCTGTCT ATTTCAGGAC
GTTCTGCGGC AGGCTAAGGA TCTTTACACC AGGCCGCAGA TGACGATCAT AATCCGTTCT
CACAATGGGA GAATTTGGAA AGAGCAAAAG AGGAAGAACT GCAAGCTAAG GCTGTCAAAC
GTCAGACTGC CCGTCAAGCT CAATTTGTGA GTCTGTCAGT GTCGCACTCC GGATTGACAC
TCATGCGATC ACATAGAATG CGGATAACGA CCTTTGGGAA ACTAACCGAA TGCAAACATC
CGGTGTTCTC CAAAGAGGAG GTGTTGACGA CGACTTTGAC GATGACTCTG ATTCCAAAGT
TCATGTTTTA GTGCATGACC TCAAACCTCC CTTTCTGGAT GGTACTGTGG CATATACAAA
GCAACTTGAC CCCATTAATC CTGTTAAGGA TGGCACAAGT GACATGGCTC TCTTCTCTAA
GAAAGGAAGC GCTTTGGTAA GGGAGAGAAG GGAAAGGCAG GAGAGGGAGA AGGTACGTCA
TTGTCTGTAT GGCTAAAATT GAACCCTTAT TGACAGACAT CTAGGCTGCG GCAAAAGCAG
CGTCGATCGC AGGTACCACC CTTGGTAACC TCATGGGTGT CAAGGACGAA CCAGATCTCG
GTCAAGGTAT ATTTATTTAT TTCTTATGGT CAATTCATCG CTGATCAGTA CTATAGAGGG
TCAGAAAGAT GGCGTGACTG AGAATTACAA AGCTGATTCA CAATTTTCGA GTCATCTCAA
GAAATCGGAA GGTGTCTCCA ACTTTGCAAA GAGTCGTACT TTGAAAGAGC AGCGAGAATA
TTTGCCGGCC TTTGCGGTAC GAGAAGAGTT AATGGGAATG ATACGAGATC ACCAAGGTAT
GTTATATACT ATAGCTTGCA TTTTCACGTC TAACTTTTAT TAGTGCTTGT TGTCGTTGGA
GAGACCGGGT CAGGCAAAAC AACTCAGCTG GGACAGTTTT TGTATGAGGA CGGGTATTGC
GCGAACGGAA TGATTGGGTG CACCCAACCA CGTCGTGTAG CTGCCATGTC TGTGGCCAAG
CGTGTCAGCG AAGAAATGGA GGTAAGCTGC TAAGCATCGT TCAGCTTTAT GTGTACTAAT
ATCATTCCCA GTGTACCCTA GGTGAAACCG TTGGCTACGC TATCCGTTTC GAAGACTGTA
CATCCAAAGA TACAAAGATT AAGTGTGAGT TTGCATGATT AGTTCACATT GCAGTGTGTT
GTGACTGACG GGGTCGACAG TTATGACAGA TGGTGTCTTG CTTCGAGAGT CATTGAATGA
AGGCGATTTG GATCGATATA GTGTCATCAT CCTTGATGAA GCACACGAAC GATCATTGAG
TACAGATATC CTGATGGGTC TTTTGCGAAA AAGTAGGGGA ACACTTTAAC TTTCTGATCC
GCCGCCAGGA CTGAAACCTA TTGTCTAGTT CTTACCCGCC GACGTGATCT GAAACTCATC
GTTACCTCAG CTACCATGAA TGCCGAAAAG GTCAGTAATT CAAGTTGAAA ATGTTGTTTT
TACTAATCCG TGTGATAGTT CTCTCAATTT TTTGGTAACG CTGCCACTTA CACTATCCCT
GGTCGTACCT TCCCCGTTGA GATCTTCCAT TCCAAGTCAC CTTGCGAAGA TTACGTTGAT
AGCGCCATTA AGCAAGTCCT CCAAATCCAC CTGTCAAGTT CGCAGGGAGA TATTTTGGTT
TTCATGACAG GTCAAGAGGA TATTGAATGT TGCTGCCAAG TCATTGAAGG TGAATTGTCT
CCAATCACAA TACGATAGTG CTAACTAGTG GCTCATTAGA ACGACTGTCT CAACTTGATG
ATCCCCCGCC TTTGGCTGTG TTACCAATCT ACTCTCAAAT GCCAGCGGAC TTGCAAGCGA
AGATCTTTCA GCCAACCCCA GATGGTCGAC GCAAGGTCGT TGTTGCTACC AACATCGCGG
AGACTTCCCT TACAGGTTCG TAATATTTCA TTCTTCTTAG ACATCTAGAA TTGGTTGCTA
AACTTGTCTT AGTTGACGGC ATCCTATATG TTGTCGACTG CGGATACTCG AAGCTCAAGG
TATACAATCC CAAGGTTGGA ATGGATGCTT TGCAAATCAC GCCTATTAGT CAAGCCAACT
GTGGCCAACG TGCTGGTCGT GCTGGTCGTA CAGGTCCTGG GTGCGCGAAA ATAAATCATG
CCCATGGAGC CCACTGCTAA CGAAGTCTTT GCAGTTTTTG TTACCGGTTG TATACTGAGA
CGGCATATCT CAACGAGCTA TTTGCTAGCA ACATCCCTGA AATCCAGAGG ACCAACTTGG
CAAACACCGT TCTACTTCTC AAGTCGTTGG GTGTCAAAAA TTTACTGGAG TTTGATTTTA
TGGATCCTCC TCCTCAGGTG AGCTCATCAT CATGTAATCT GTTACAGCCG GTGCTTACAA
GTATTTAGGA AAACATCCTT AACTCAATGT ACCAGCTCTG GGTATTGGGC GCTTTAGATA
ATGTGGGCAA CTTGACCTCT ATCGGTCGCA AAATGTCCGA TTTCCCAATG GAACCATCCC
TCGCCAAGAT GCTCATTGTC TCCGTTGACT ATCAATGTTC CTCTGAGATG CTCACCATCG
TGTCAATGTT ATCTGTGCCA TCAGTGTTTT ACAGACCTCC TCAAAGAGCA GAAGAGAGCG
ACGCCGCCAG GGAAAAATTC TTTGTGCCTG AAAGCGACCA TCTGACGCTG TTACACGTTT
ATACCCAGTG GAAGAGCAAT GGGTAAGCTG CGTTTCGCAT GTTATAATGT ACTAAAAATT
GATCCTTTTT CAGATATAGC GATTCTTGGT GCATGAAACA TTTCTTGCAC CCGAAACTCA
TGAGAAAGGC CCGAGAAGTG CGAGGACAGT TGGAAGACAT TATGAAACAG CAAAAAATGG
ACCTTTTGTC AGTAGGAACG GATTGGGATA TCGTCAGGTG CGTTTTATCT CATATTTGCC
CGAAGGAATG ATATTGACTA TGGTGAAGAA AATGTATTAC TGCTGGTTAC TTCCATCAGG
CGGCGAGAGT CAAAGGCATT GGGGAGTATA TGAACATTCG AACAGGAGTG AGTCATCTAG
TAGATTCCTG ATTGCAGTAG GGCGCAACTG ACATAATCAC CAGCTGCCTT GTGTTCTTCA
CCCAACTTCT GCATTGTATG GTCTTGGTTG TGAGTGAGGT TGTCCATCGA TGGATATTTT
TCTGACGACG TGCAGATATG CCTGACTATG TTGTGTATCA TGAGCTTGTA TTAACATCCA
AACGTGAGTT CTTCATGTGC GTCCTCCATA CAAGGGATTT GCCTCATTCT TTACAGAATA
CATGATGTGT GTTACCTCGG TTGATCCCTA TTGGCTTGCC GACCTCGGTA GTGTCTTCTT
TTCAATTAGA GAGAAAAACT TTGATGCTTT GGCTCGCGCA CGAGCAAACA GAGACTTCAG
CAAGAAAACA GAGATGGAAG CTGAGATGGC CAGACAGCGA GAGGAGTGAG TTTAAAATGT
AGTCCTTCAT TACCTTGGCC TCAAGCTAAC GGTTAGTAAA GGATGGAACG AGCGAAAGCT
GAGAAGATCA AGAAGGAAGC AGTGGCAAAG ACTCCCAGAA TTGGCGGTGT TGGAGTAGCA
TATACGCCGA AAAGTGCAGG TATTGGTGCG GGTGCGAGGT CATCTGCAAC ACCGAGAAGA
CGAGCAGGAG GCATTTAA
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| Protein sequence | MSRIMNQVNP NDLLAVSTFG QFPSEPMLSL HTRILAHLSV LQGQNQSGAR RRSEHSPPRM
LGGRPVGENV EGMDHDDTDT LAPEPVRKGG LRRADNAPKF KAPATARPSL LGLDKLAAEK
RAAAAATADR NGPPSKKARK DEGNEDDEQS GGVFKVPTIP IRRDNVRVRP EETPSRGSGL
SEEARARLEA RRRERNQPST GISASTADRE HSREGLGDFQ RRANRDRWNE RGGEREPGQG
EYSRDGRGGG NDWGRRQNGR DGKPWNAAPT PRTSRADRDF DGGSARIPNR GWDETPRGSR
GPGGWGKGER TSRGWDQTPR SARESPEGGG LDLNAKEWEE EQVKLDRDWY SYDDEGAVAA
DDDHNPFSQW ENLERAKEEE LQAKAVKRQT ARQAQFNADN DLWETNRMQT SGVLQRGGVD
DDFDDDSDSK VHVLVHDLKP PFLDGTVAYT KQLDPINPVK DGTSDMALFS KKGSALVRER
RERQEREKAA AKAASIAGTT LGNLMGVKDE PDLGQEGQKD GVTENYKADS QFSSHLKKSE
GVSNFAKSRT LKEQREYLPA FAVREELMGM IRDHQVLVVV GETGSGKTTQ LGQFLYEDGY
CANGMIGCTQ PRRVAAMSVA KRVSEEMECT LGETVGYAIR FEDCTSKDTK IKFMTDGVLL
RESLNEGDLD RYSVIILDEA HERSLSTDIL MGLLRKILTR RRDLKLIVTS ATMNAEKFSQ
FFGNAATYTI PGRTFPVEIF HSKSPCEDYV DSAIKQVLQI HLSSSQGDIL VFMTGQEDIE
CCCQVIEERL SQLDDPPPLA VLPIYSQMPA DLQAKIFQPT PDGRRKVVVA TNIAETSLTV
DGILYVVDCG YSKLKVYNPK VGMDALQITP ISQANCGQRA GRAGRTGPGF CYRLYTETAY
LNELFASNIP EIQRTNLANT VLLLKSLGVK NLLEFDFMDP PPQENILNSM YQLWVLGALD
NVGNLTSIGR KMSDFPMEPS LAKMLIVSVD YQCSSEMLTI VSMLSVPSVF YRPPQRAEES
DAAREKFFVP ESDHLTLLHV YTQWKSNGYS DSWCMKHFLH PKLMRKAREV RGQLEDIMKQ
QKMDLLSVGT DWDIVRKCIT AGYFHQAARV KGIGEYMNIR TGLPCVLHPT SALYGLGYMP
DYVVYHELVL TSKQYMMCVT SVDPYWLADL GSVFFSIREK NFDALARARA NRDFSKKTEM
EAEMARQREE MERAKAEKIK KEAVAKTPRI GGVGVAYTPK SAGIGAGARS SATPRRRAGG
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