Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE01610 |
Symbol | |
ID | 3257528 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 443341 |
End bp | 444342 |
Gene Length | 1002 bp |
Protein Length | 243 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256751 |
Product | expressed protein |
Protein accession | XP_571131 |
Protein GI | 58267950 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.154476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCTA TATCACGCAC AGTAGAGTGT TCTTTCAGAA CTGCAACCCG CTCAACGCCG CGGATCCGTC CGACTTTCGC ATCTTCCTGC CGATGCCTTA CCCGCTCGAA TAATATTGCC GCTGACATCC AGAGTCGAAC ATTCTTCTCT TTGCCGGACC TCACAAAGAT TGCCAGTCTT GTGCCAGGAC AAGGTCAAGA AGATACTAGC GAGAATGCTC GAGCTCAAGG AGTCGAGGTT GACGGTGAAG TGCAACGGTA TCATGCCAGG AAGATCTTAC CGTATGTGCT GGTCGTGCGA TCATATGTCC GAGGTCTTTC TTTTGCTTAA TCAGACAAAT TTTGCAGGTA TTCCCAGGCT CAGCTGTATT CTTTAGTTTC AGATGTCCCG TCTTACGCAT CTTTTATTCC TTTCTGCAAA TCCTCAACTG TCCTTGCGCC ATCTTCACCT GGCTTCTCTT CGACAAGAGA ATGGGTAGGA TGGAAACCGG AGGATAAGCC GTTCGAAGTG CTGGCAGAAC TAGCGGTCGG ATTCGGAGGA TTAGAAGAGA GATATGTCAG TAAGGTCGTA GGCAGACCAT ACGAGAGTGT TGTTGTGAGT GTGTTCGTTT GCCCATGAGA ATCTGCCTTC TTACACGCTT GTGTCATCAG GCGACAGCTT CAAATCAGAC TCCTATGTTC AAAACCCTAA CAACATCTTG GACTTTCAGC CCCGCTTCAT CAATATCCCC TCATCCATCA TTTGGCAATC CTTCATCTGA TTCTTCGAAT TCACGAATCC CGAATTCCGC ATCGCCTGCA GACCCCACGC ATGGTCCCAG CTTGTTGACC ATTGACTTAG CCTTCAGCTT CCTCAACCCT TTACATAGGA TTGCCAGTCA AGCGGTGTTA CCCAAAGTTG CAGAAAAAAT GGTCGAAGCT TTTGAAGAAA GATGTTTGAA GGTTTGGGGA CAAGGGAAGC AATGAGTATA GCAGATGGTA CAATGTATGT GTGTTCTATC GT
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Protein sequence | MSSISRTSRT FFSLPDLTKI ASLVPGQGQE DTSENARAQG VEVDGEVQRY HARKILPYSQ AQLYSLVSDV PSYASFIPFC KSSTVLAPSS PGFSSTREWV GWKPEDKPFE VLAELAVGFG GLEERYVSKV VGRPYESVVA TASNQTPMFK TLTTSWTFSP ASSISPHPSF GNPSSDSSNS RIPNSASPAD PTHGPSLLTI DLAFSFLNPL HRIASQAVLP KVAEKMVEAF EERCLKVWGQ GKQ
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