| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE01270 |
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| Symbol | |
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| ID | 3257736 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | + |
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| Start bp | 348381 |
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| End bp | 354156 |
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| Gene Length | 5776 bp |
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| Protein Length | 1562 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638256715 |
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| Product | ABC transporter ABCC.6, putative |
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| Protein accession | XP_570712 |
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| Protein GI | 58267112 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCCTC ATACATTGCC CGCCTGGCCT GTTATGGTAG ATACAACATG CGTCGCCGTT
GTACTCGCTA CTGTACTCAT CTCATCATTG CAAATCATCG TGACATGGAT CAAGAGCAAG
CGTGGCGGGC ATATTCAGCT TTCTGAATCT TTTGAACCCA AGACCAAGAA GGAACTTTTC
GAAACTAACT TATTATTTCA TGTTGCCAGG GAAACGCCTG AAGATGGCGA ACCGGTAGAG
GTTGCTGGTT TTTGGAAAAG TGTGAGCCCT TCTAGACCAT TTTCGGCGCT AAAACCCTGC
CATCAGACTA TCTTTGCCAA AGTTTCCCTT CTGTTGGTAA CTCTCAGCAA TCTTGCGATC
CAAGCCGTAG ATACAATCGT GACATCACCT TATCGCGGAC AATCATGGCT CCCTCTTCTT
ACATTAATGA CCGTAGCCTT GACCAATATC TATCTCGTTG CGCTCTCCAC GCACTACCTA
TTTACTCGCA ATCTCGCCAG ACACGCTAGT CTGACTAAAC ACATTTGCAC CATCTCTAGC
ATATTACTTT TTCATTGGTA CTTTCAAACC CTGGGACAGT ATCTTTGGCG AAGTATAAAT
GTAGATATTC CCTGGACCGG CTACGCTTCA TTGGGATTGG CGTTCCTTCA AACCGTCATG
TCAGGTCTCA TCCCTGTTGG ACCCAAGCTG TGGGTGGATA TAACCGCTGT ATACACTAAG
GCAGTCCGTG CCAAAGTTGA GGACAATGCT GTCTTCACAT TTGGTGGTAA CCTTATTGAG
GAGATTTCAT GCTCAGTCTT CGGAAAGCTA ATGTTTACAT TTGTTTACCC GATGATTGTC
AAGACTGCAA AGATGCACCA GGTTGACATC CAGGATCTCC CAGCCGTACA GGCTGAGATG
AGAACGCAGA ACATGTACCA TGAGTTTATG GGCCCCAAAG CAACCGAGGA TATCAGATGG
AAAAGGCATC CAACGTTGTC GCTACTTTGG ACAGTATGGC GGCCTCAGCG ACGAGCGGTG
GTCAAGGGTG AGTATTGCTG CAATGACCTT GTTGCGTTGT TTTTGGTGAT TTGACTCTCC
TTTAGCCCTC ATCTTCATGT TCGCTCTCTG TCCTCTCTGG TATCTTCCCC ACATTTGCCT
TCAGCAGATT CTTGGTATCC TCGACGACCA CACTGCCGTC CGGTTGAGCG CTGTAGCATT
TGCTGCTCTC ATGATTCTTG CTAAAGTTGG CAACACGATC ATTTCTATGC AGCAATACAA
TATGTGAATC CCAAGGTTAG GAATAGACAT GGCATGTCGC TAACCAGATG CAGTACCATG
TCATATGTCG GACCTCGAAT CAATGCCCAT ACGTCATTCC TTCTTTACCA GTCAGTGGGC
TCTCGATATC CGTCATTCAA TGCTAACAAG AGTGTTCAGG AAACTCCTTA CTCGCAAGCT
CTTTGCCATT CCGGAAAATA AGGAAGGCGA TAAAGCTGTT CATACTAAGG CCGATATTCT
CAATCTCATC TCTTCTGACG CTTCTTCTGT GCAACGTGTC GGCTGGACGT TCACCAACCT
TTTTCGATCA GCACTTGAGA TGGCCCTTGG ATGCTCCTAT GTATGGATTC TTCTCGGTCC
CTCTGGTCTG TGGGGTCTTT CTACCCTCAT CCTTACCTGT CCTCCGGCGT ACTTGTTAAC
AAAATGGGAA TACTCTGTTT TTGAGAAGAG GCTTGCCATC AGGGATGAAA GGGTATCATT
GATGCAGGAA GCCGTTCAGG CAATTTCGAT GATCAAAATG ATGGCAACAG AGAGGTTCTG
GTATAGGAGG ATCAATAGTG TGAGAGAAAG AGAATTCAAG AAATTGATTC AGGCCCAGGT
CTTGGGCTAC ATCTCTGGTT TGCTTTAGTG AGCTAGTCAC ATTTTTCCAT ACTTTTGGTG
ACTAAAGTAG TTTCTAGTTC GGCTGCCCCT ACTGTCATTG TCATTGTTGC GTTTGCTCAC
TATACACTTG TCGCTAAAAA GGAGCTTACA GCGACTATCG CATTTGTAAG TGACTTAGGC
ATGGCCCATG ACGAAGTGGC TGATGGCTCT TCAGACTTCC ATTGCCGTTT TCAATGAACT
CCGCCCGGCT CTTCTCGATC TGCCTTCCAG CGTGGCTGAG CTCCTCCAAG AGATTCTTGG
TGCTCGGCGT ATCGCCAATT TCCTCACTAC TGGAGACGTC GAGTATTTCA ATGATACTTC
TTTCAATTCC TCTGACATCA CAACTCCGGA AGAAGGTCCT CTTTACATCG TTGGTACTGT
CGCATGGGAT GTACCAAAGA TCTACGTTGC ACCAGCTAGC AACCACAGCA CCGACACGTC
AAGTGATAGT TCGGAAAACA ATAAGGTCGG CTTCAGGCTT ATGGATCTTG ACATCAAGTT
TCCCAGAGGG AAGTTGACTC TTGTGGCTGG TAAATTTGGT TCGGGAAAGT CTCTTCTGTT
GTTGGCTTTA CTAGGAGAGG CAAGGTTGAT TGAAGGCAAG ATTTCGTATA CGGTTTCTCC
TATCATGGAC CCTCAGATAA TTGACAAGAA CGACTGGAGT TTATTGAAGA ACGGAGTGGC
CTACGCTCCT CAGGTGAGTC GTTTGATACG CCTAGTAAAT CCCAGGCAGC TAATTCTTTT
CAGACACCTT GGCTTCTGAG CCAAAGCATT CGAGATAACA TTCTTTTTGG CCTTCCTCTC
GATATGGAGC GCTATCGTTC TGTCTGCTTT GCTACTGGTC TCCTGCCTGA TCTTGAGCTC
CTCGAGGATG CCGACCTCAC TGAAATTGGC GAACGAGGCA AACTTCTCTC TGGTGGTCAA
AAAGCTCGGG TCAGTTTGGC ACGTGCGATT TATTCGAGGG CTTCAGTTCT TCTTCTGGAT
GATGTTATAT CGGCCGTTGA TGCTCAGACG AGTCAGCATA TCATCACACA TTGCTTCAAT
TCCTCCCTTA TGAGTGATCG AACTGTCATC CTCGCTTCTC ATGCTGTGGA GACTTTGGCG
CCTTTGGCTA CCCATGCAGT TTATCTGGAT GATGGCAGAT GTCTTTGGCA AGGTTGGGGG
AGGCAGTTGC TTGAGACTGA GCACATGGCC CATTTGAAGA CTGAGTCTAG ATCGCCCAGT
CGCTTGCCCA GCAGGTTGCC AAGTAGCGAA AACCTTAAGT CTGAAGCAAA GAGTGACAGG
AAGGATAAAA AGAAAGGTGA AAAGCCTGTC TCACTCGACG TTCAGGCGAT GAAAGAAAAG
TTTGAAATTG GTGAGGCGAT CCCAAAGACA CCAAAACAGC TCGTAATTGA AGAAGAAAGG
GCGGTGGGAG CTGTGGATCT AATTCACTGG AAAAACCTAC TAAAGTTTAA CGGTAATGGG
GTATATTGGA CGGTTGCCTT CACCCTCATG ATGGCTGCTG TTCTGGCACC TGTTTGTGAG
AGGATGGCTC TTTCGTGAGT TGGCCACCTC AAAAATCTTA CGAACCAGTC TGACATTTTG
ACGGAAGACT TTGGACAAGC ACAGAAGGCG AGAGATCAGT CGATCATAGC GTTGTGTTCT
GGATTTCACT TTACGCCGCT GCACGTCCTC TTTTGATGGA ATGTGGCTGG GTTCTGTGCT
GATCGTTTTC ATAGATTTCT CTCACACGTG TTTTCCTGGA CACAGTCTAC GGTTTATTCT
GTTTCTGGGG TAGTATGCGA GCTATGAAAA TTGCACGCCT CAATGATCTA TTAACGAGAT
TTGCTAGTTT GCTGACTTCG GCACTGTAGA TCCACGGTCA GATGCTCGAG TCGATGTTAC
ATGCCAAGAT GCTGTTCTTC ACCAAGACTC GAGCAGGATC TATTATTCAG CGTTTCGGCA
AAGATCTTGT TAGTTCTAAT ACGACTTAGG TAGGACCCAA ACTAACCTAT TTCTAGAACG
ACATCCTTGA CTGTTCCAAT TTGCTTACTG AAATGACTGG AGGGGGCATG AACAGTGATT
TCCACCTATT TCGCCGTAGT CACGCTAATA GTCATTCGTA GTTATCATCA GTCTGATATC
AGTATCCGTG TATGGCGGCT GGATATTCTG TGTAGTGACC ATTCTATTGC TCGCCGCTGC
TTGGACACCA GTAATCATGT TGAATTATGC ACTGAGTGCT TTGCTGACCT GTCCTTTTAG
GGGAAATGGT ACCGGGCATC TTCTCGACAA GTCCGTCGAC TTCAAGCTGT CCTTCCGGGC
CCCATCAATG CGATTTACGG AGAGACTGTG GCTGGTACTA CCGTTATTCG CGCTTTCGGT
GCCCAGTCCG TTTTCATTGA TGGTAAGTGC CTTGCAAAGC GCAATACATG TTCAGGTAGT
CTCTGATTCG AAAACATTCT TAGATCTCTT GAGATGGACC AACATGAAGA TCACAGCGAC
TATTTGGACT GTTGCTATCG CCCGATGGCT ATTATGTGAG TAGCTTCGTT TCTGTCTTTC
GGTATGTCAC TAACCCAAGG TCCCATTATG CAGTGAGCTT GCAAGTCATG GATGTCATTG
TCCGTATTAC TGCTCTCACT CTTCTTCTTG CCCGAGCTTC CACTACAGGT GCTGTCGCTG
GTTTCGTCCT TACTTTTGCT GGTTCCATCT CCACTTATGT TAATTGGATG CTTATTCACC
TCCGCAACTT CGAGCTCAAG GGTGTCAGTC TCGAACGCAC TTCGGAATAC CGAACACTTT
CACGAGAGGA CGGTACGAAA CTTCTTGCAG ACGACACGCG GTATGCCACA GATGGACTAG
AACTCGACGA AGAAGAAGAT CAGCGTCTTG GCAGTTGGCC TGAGCATGGT GAACTCAAGG
TTGAAGGCCT GTGTGCCCGA TACGGCCCTG ATATGCCTGA GATTCTCCAT GATGTCACGT
TCAGGGTGAA GGGTGGCGAA AGAATCGGGA TTGTGGGCGC TACTGGAAGC GGAAAGTCAA
CCTTAGCGAA GGCGTTCTTT TCCTTTGTGG ATGTGACGAA AGGCAAGATT GAAATTGATG
GCCAAGGTCG GTTTGCTTTC AAGCGAATAT CCCTTGTGCA AACTGACATG AACGTAGATA
TTTCCACAAT TCCCCTAGGA GCGGTACGGT CTAAGTTGGG CATCATCGCT CAGGACCCTG
TCCTTCTTTC AGGCTCTCTG AGGCTGAACC TCGATATAGA AGGCAAATAC TCCGATGAGC
AACTGTACAC TGCGCTACGC CAAGTTCAGC TTCTCAAACG ATCCGATTTC TGCCCCGATC
TCCTCAGCAA CGACCTTACA TCTCTTACCA TTGAGACAAG CTCGCACAAA CAGCTACAGC
AACAAGAAAA TATCTTCTCC AATCTTGACT TTGAGGTGAA GGGCGGCGGA GAGAATTTAT
CAGCCGGTCA AAAGCAGCTT GTTGTGCTCG CCAGAGCGCT GCTGAAGAGA CATCGCGTTT
TGATTCTCGA TGAAGCGACT GCCTCAATTG ATTCGGCTAC CGATGCTGAG ATCAGTCGAG
TTGTGCACGA AGAGTTTACC AACGCCACAG TTCTTATCAT CGCCCACCGA CTGCGGGTGA
GTACGCTCTC TTTTTGAGAA ATGATATCTT TCTAACCCAT TTCTAGACTA TTATTCCTTG
CGCCAACATT CTGGTCATGG ACAAGGGTCA TCTAATTCAA CATGGTTCTC CTCTCGAGCT
CATTCACCGC AAGGGTCGGT TCCAAGACCT GTGCATGGCA GCTGGGGAAG AAGAGTACAG
TCATCTTATC GGCCTGGCCG AGCAGCACGA TCCGTTGAAC AAGGACGAGC TTATAGGGTC
GCCTTTTGTT CAGTGA
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| Protein sequence | MGPHTLPAWP VMVDTTCVAV VLATVLISSL QIIVTWIKSK RGGHIQLSES FEPKTKKELF
ETNLLFHVAR ETPEDGEPVE VAGFWKNTIV TSPYRGQSWL PLLTLMTVAL TNIYLVALST
HYLFTRNLAR HASLTKHICT ISSILLFHWY FQTLGQYLWR SINVDIPWTG YASLGLAFLQ
TVMSGLIPVG PKLWVDITAV YTKAVRAKVE DNAVFTFGGN LIEEISCSVF GKLMFTFVYP
MIVKTAKMHQ VDIQDLPAVQ AEMRTQNMYH EFMGPKATED IRWKRHPTLS LLWTVWRPQR
RAVVKALIFM FALCPLWYLP HICLQQILGI LDDHTAVRLS AVAFAALMIL AKVGNTIISM
QQYNIVFRKL LTRKLFAIPE NKEGDKAVHT KADILNLISS DASSVQRVGW TFTNLFRSAL
EMALGCSYVW ILLGPSGLWG LSTLILTCPP AYLLTKWEYS VFEKRLAIRD ERVSLMQEAV
QAISMIKMMA TERFWYRRIN SVREREFKKL IQAQVLGYIS GLLYSAAPTV IVIVAFAHYT
LVAKKELTAT IAFTSIAVFN ELRPALLDLP SSVAELLQEI LGARRIANFL TTGDVEYFND
TSFNSSDITT PEEGPLYIVG TVAWDVPKIY VAPASNHSTD TSSDSSENNK VGFRLMDLDI
KFPRGKLTLV AGKFGSGKSL LLLALLGEAR LIEGKISYTV SPIMDPQIID KNDWSLLKNG
VAYAPQTPWL LSQSIRDNIL FGLPLDMERY RSVCFATGLL PDLELLEDAD LTEIGERGKL
LSGGQKARVS LARAIYSRAS VLLLDDVISA VDAQTSQHII THCFNSSLMS DRTVILASHA
VETLAPLATH AVYLDDGRCL WQGWGRQLLE TEHMAHLKTE SRSPSRLPSR LPSSENLKSE
AKSDRKDKKK GEKPVSLDVQ AMKEKFEIGE AIPKTPKQLV IEEERAVGAV DLIHWKNLLK
FNGNGVYWTV AFTLMMAAVL APVCERMALS FLSHVFSWTQ STVYSVSGVI HGQMLESMLH
AKMLFFTKTR AGSIIQRFGK DLVIIISLIS VSVYGGWIFC VVTILLLAAA WTPVIMLNYA
LSALLTCPFR GNGTGHLLDK SVDFKLSFRA PSMRFTERLW LVLPLFALSV PSPFSLMVNL
LRWTNMKITA TIWTVAIARW LLLSLQVMDV IVRITALTLL LARASTTGAV AGFVLTFAGS
ISTYVNWMLI HLRNFELKGV SLERTSEYRT LSREDGTKLL ADDTRYATDG LELDEEEDQR
LGSWPEHGEL KVEGLCARYG PDMPEILHDV TFRVKGGERI GIVGATGSGK STLAKAFFSF
VDVTKGKIEI DGQDISTIPL GAVRSKLGII AQDPVLLSGS LRLNLDIEGK YSDEQLYTAL
RQVQLLKRSD FCPDLLSNDL TSLTIETSSH KQLQQQENIF SNLDFEVKGG GENLSAGQKQ
LVVLARALLK RHRVLILDEA TASIDSATDA EISRVVHEEF TNATVLIIAH RLRTIIPCAN
ILVMDKGHLI QHGSPLELIH RKGRFQDLCM AAGEEEYSHL IGLAEQHDPL NKDELIGSPF
VQ
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