Gene CNE01260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE01260 
Symbol 
ID3257693 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp346310 
End bp347600 
Gene Length1291 bp 
Protein Length339 aa 
Translation table 
GC content47% 
IMG OID638256714 
Productcytoplasm protein, putative 
Protein accessionXP_570711 
Protein GI58267110 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTCG CGGGTTGGTG TCTCGCATTC CTTCGTCGCT TCGTATTTCT GTGGCGCTTA 
CCCTTGATGA TTTCCGCAGA CATCGCAGTG AATCTCACGG ATCCCATGTT TCAAGGCAAA
TATGGCGGAC GAAAGAAACA TGAAGCCGAT GTTAAGGCCG TTATCGAGAG AGCTAAGGCC
AAGGGCGTTG AAAAGATTCT AATTACCGGC ACGAGCTTGA AGGAGTCCAA AGATGCATTG
GAGATGGCTA AGGAGTTTGG TGAGTCATCT GAACATTTTA ACGCATTACA GAAATATAAA
TATCAGCATA CAGATCTGCA GTGCTCTGCC GGTGTTCACC CAACTTCGAC CTGCGAAATG
GATAAGCACC CTTGTGGTGC TGAAGGATAT CTCAAGGAGT TGACCGATCT CATCGATCAA
GACCTTGGCG AAGGAGGTTC CAAAAGAATT ATATCTATTG GTGAAATAGG TCTAGGTATG
TTTACCTCCT CTGAGCTCCC AATTAAGCAC TGACTGAGAT AATCGCAGAT TACGACAGGC
TTCACTATTC CCCTCAAAAA ACTCAGCTTG CCCATCTTCC AGAACTCCTC CTTCTCCAAA
AGAAGTATCG ACTCCCTCTC TTTCTGCACT CTCGAACAAG TGGGTCACAT ACTGATCTCA
TGAGGATAAT GAAGGAGATT GGCTGGACCA CCGAATGGGG AGGAGGTGTC GCCCATAGTT
TTACGGGGAC TGCGGAGGAG ATGACGGAGC TGGTCAGTAC ATTGCCCTTT ATCAATAGAC
ATGAGCTCAT GGTATGGGCA TTAGGTGAAC ATGGGCCTTC ACATTGGCGT GAATGGCTGC
TCTCTCAAGA CGGCTGACAA TCTCGAAGTC ATCAAGCAAA TACCTCTTGA CAGGCTTCTA
TTGGAGACCG GTGGGTGATT GAATCTTGGC TGCACTAAGA TCGAGGCTCA TTTGCATGAC
GTTATCAGAT GCTCCCTGGT GCACTCCCAC AGCATCTCAC GCTTCTGCCG CCTACGTCCC
TCCCAAAGAC TCCCATCTAG CTGTTCAAAA AGTCAGCAAA GCTGATAAGT GGAAGGAGGG
GTTGGGTGTA AAGGGAAGAA TGGAACCTGC CGAGGTAAGG ATATCTGATT ACGAATCAGC
CATACAAGAT GCTGATTGCA GCAATAAGAT TGGCATAATT GCCCATGTTG TTGCCTCTGT
CAAAGGAATA CCCATAGAGG AGTTGGCCGA GCAAATATGG CAAAACACAA TCAAGCTCTT
CTATCCCCAT GAGATTAACA GATCACGATA G
 
Protein sequence
MRFAGWCLAF LRRFVFLWRL PLMISADIAV NLTDPMFQGK YGGRKKHEAD VKAVIERAKA 
KGVEKILITG TSLKESKDAL EMAKEFDLQC SAGVHPTSTC EMDKHPCGAE GYLKELTDLI
DQDLGEGGSK RIISIGEIGL DYDRLHYSPQ KTQLAHLPEL LLLQKKYRLP LFLHSRTSGS
HTDLMRIMKE IGWTTEWGGG VAHSFTGTAE EMTELVNMGL HIGVNGCSLK TADNLEVIKQ
IPLDRLLLET DAPWCTPTAS HASAAYVPPK DSHLAVQKVS KADKWKEGLG VKGRMEPAEI
GIIAHVVASV KGIPIEELAE QIWQNTIKLF YPHEINRSR