| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE01030 |
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| Symbol | |
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| ID | 3257623 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | + |
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| Start bp | 290481 |
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| End bp | 292839 |
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| Gene Length | 2359 bp |
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| Protein Length | 576 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256691 |
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| Product | choline transporter, putative |
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| Protein accession | XP_570845 |
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| Protein GI | 58267378 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00907] amino acid permease (GABA permease)
[TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTTTCTTTCG TTTCTACCTT ACTGGCGGCT ACTGAATCGA CGTCTTCAAC CATCTCGGCA
ATCTTGACCC CCTCAACTGC TCAAAACATT ATGTCGGATC CAAATTCGGC CCAGTCATAC
CCTCTGAAGG GCCCCTACTC CCAACAGGCA GTTACCGAGT CTATCCAAAG AGAACAGGTT
GGTTTGGGAC CTTACCCTTC TCGTCCCCAG GGCGGCCATG TCACAAGAGA AGGTGAAGAG
GAGGTGGTGG ACCCTCACAA AAATTTCCAC CTTATGAGTT TGGGTAAGTT TTTCTCCTTT
ACACGTAAAG CCGAAACTTG TTACAGTTTC TAACCTTTCA TAACCTGTTA GTTGGTTTGG
CCTATGCCAT TCTCAATTCA TGGACTGCCA TGGCTACCTC TCTTTCCGTC GCTTTACCAT
CTGGTGGTCC CTCTGCCGTC ATTTGGGGTA TCGTTCCTTC TTTCATTGGT AATCTTTCCA
TGGCCGCTAG TATGGCTGAA ATTTGTCACG TTTACCCCAC TGCTGGTGGT CAGTACCACT
GGTCTGCAAT TCTGTCTCCT GCCAAGATGG CTCCTGTACG TCTTTCATGC AATCTGAAGC
CTGAAAACCT AGCTGATCTT TCATCAGGCC GTCTCATGGG TTTGTGGTTG GTTCGCTGCT
TCAGGTTGGG TCGCTCTTGC GGCTACTGCC GGTTCTTTGG CTGGTCAGCT TATCACTGGT
GTCATTGGCC TCATGCACCC CAACTACGAT CCTGAACGGT GGCACATTTT CCTCATCTAC
ACTGCCTACA CCCTTGGTGC CTGTTTCCTC AACATTTTCG GCTTAAGGCT GTTGCCCATG
ATCAATCAGA CTGCCATTTT CTGGTAAGTT ACAATTGTTG AAGTCCAAGC AATCGAAGAA
GTCAAACATG CTCATCTCGG TGCATAGGTC CTTGACTGGT GCTGTTATTA TCATCATTGT
CTGTCTTTCT TGCGCTTCTC CCAACTTTCA AGACGGGGAC TTTGTCTTCC GCGAATTCAT
CAACACCACT GGATGGCCTG ATGGTGTTGC TTGGATCCTT GGCCTTTTGC AGAGTGCGTT
ACTACGAGAG ACGTCGTTAG AGCAACGCTA ACCTTTTTTT AAAAAGGTTC TTTTGGTCTT
ACTGGTTATG ATGCCGTCTC TCACATGGTC GAAGAGATGC CTTTACCTCA CATTAACGCC
CCTAAGACTA TGATTCTCGC CGTCTGCATT GGTGCTTCAA GCTCTTTCGT CTTCCTAATC
TGTCTTCTGT TCTCCATCTC TGATGTGGAC TCTGTCAACT CTTCTGCCGC TGGTGCTTTG
CTCGAATCCA TGTACCAGGC TACCAATTCC AAGGCTGGTG CCGTCTGCTT GCAGATATTC
CCCATCATTG CTATGGTCTT CACCGCCCAA GGCCTTATGA CTGCCTCCTC TCGAATGGTT
TACGCCTTTG CTCGTGATGG TGGTCTTCCT TTCTCCCGAG TTTTCGCTAT CATGAACAGC
AACGGTGTGC CGATCCCCGC TGTTCTTTTC ACCACCGTCC TCGTCATCAT TTTCGGTTGT
ATCTACCTTG GTTCTAGTGC GGCTTTGAAC GCCATTTTGT CGAGCTCTGT CGTCTTTTTG
AACATCTCTT ACTCTATCCC TAGTAAGTCT TTTATTCTTC CAAAGCAATC AACAGCTTCT
GACTCAGTAT CTCAGTTTTC CTTGTTCTCA TCCGTGGACG AAGCATCCTC CGGCCTCCTT
CCCTCCCTGA GCCCACATTC ACTTTGGGCC CTATCCTCGG TCCGATCTGC AATGTCGTAG
GTATTAATTA ATCAGCAGTT TTTATTGTCG CGCGTCTAAC GTCATACTTG CAGGTTGGTC
TTTGCTTCAC TGCGCTCACC ACCGTTTTCT TCCTTTTCCC TCCTGAGCTT CCTGTGACCG
GGACTAACAT GAATTACGCC GTTGTCGTTT TGGGTATCAT CTGTACGTTT CCTCTCCCGC
TCATCAGACC AGGGCACATA GCTGACAAAC CATGTAGTTA TCATCTCTGT CATCACGTGG
ATCGTCGACG GCCGCAAGAA CTTCATTGGC CCCCGTGATC TCGGTGCCCT GCTCGAACTT
GCCCGTTCCG AGGTTGACGC CACCAAGGTC AACGTTCACC ACCACGGACA TAGCCATCCC
AACGAACACC AGTCTAGTGT CCAGGAGAAG GGCTCCGTTA CCAAAGATGT TGATTCCTTG
TAGTTGAAAC AAATGTAAAG ATTGGTGTAC TGGTCGAAAG AAGAAGGATT TTTTATTTTT
CTGGGTTACT TTCGTTATGA TTTATGTCTA GAGGTTATTA GGCAATGGTA TAAAAGTAGT
GCAATGAGAT CATAGACCA
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| Protein sequence | MSDPNSAQSY PLKGPYSQQA VTESIQREQV GLGPYPSRPQ GGHVTREGEE EVVDPHKNFH
LMSLVGLAYA ILNSWTAMAT SLSVALPSGG PSAVIWGIVP SFIGNLSMAA SMAEICHVYP
TAGGQYHWSA ILSPAKMAPA VSWVCGWFAA SGWVALAATA GSLAGQLITG VIGLMHPNYD
PERWHIFLIY TAYTLGACFL NIFGLRLLPM INQTAIFWSL TGAVIIIIVC LSCASPNFQD
GDFVFREFIN TTGWPDGVAW ILGLLQSSFG LTGYDAVSHM VEEMPLPHIN APKTMILAVC
IGASSSFVFL ICLLFSISDV DSVNSSAAGA LLESMYQATN SKAGAVCLQI FPIIAMVFTA
QGLMTASSRM VYAFARDGGL PFSRVFAIMN SNGVPIPAVL FTTVLVIIFG CIYLGSSAAL
NAILSSSVVF LNISYSIPIF LVLIRGRSIL RPPSLPEPTF TLGPILGPIC NVVGLCFTAL
TTVFFLFPPE LPVTGTNMNY AVVVLGIIFI ISVITWIVDG RKNFIGPRDL GALLELARSE
VDATKVNVHH HGHSHPNEHQ SSVQEKGSVT KDVDSL
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